RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 TCP10LQ8TDR4 215 aa5.09□□□□□ -1.59
SF3B6-202ENST00000478050 SLC44A1Q8WWI5 657 aa5.09□□□□□ -1.59
SF3B6-202ENST00000478050 OPTNQ96CV9 577 aa5.09□□□□□ -1.59
SF3B6-202ENST00000478050 ERP27Q96DN0 273 aa5.09□□□□□ -1.59
SF3B6-202ENST00000478050 WDR89Q96FK6 387 aaPredicted RBP5.09□□□□□ -1.59
SF3B6-202ENST00000478050 APOPT1Q96IL0 206 aa5.09□□□□□ -1.59
SF3B6-202ENST00000478050 EAF1Q96JC9 268 aaPredicted RBP5.09□□□□□ -1.59
SF3B6-202ENST00000478050 TMEM237Q96Q45 408 aa5.09□□□□□ -1.59
SF3B6-202ENST00000478050 LRRC37BQ96QE4 947 aa5.09□□□□□ -1.59
SF3B6-202ENST00000478050 TSPAN18Q96SJ8 248 aa5.09□□□□□ -1.59
SF3B6-202ENST00000478050 WDR83Q9BRX9 315 aaKnown RBP5.09□□□□□ -1.59
SF3B6-202ENST00000478050 SNRNP25Q9BV90 132 aaKnown RBP5.09□□□□□ -1.59
SF3B6-202ENST00000478050 TRIM55Q9BYV6 548 aa5.09□□□□□ -1.59
SF3B6-202ENST00000478050 GCOM2Q9BZD3 368 aaPredicted RBP5.09□□□□□ -1.59
SF3B6-202ENST00000478050 LRMDAQ9H2I8 198 aa5.09□□□□□ -1.59
SF3B6-202ENST00000478050 ZNF576Q9H609 170 aa5.09□□□□□ -1.59
SF3B6-202ENST00000478050 CCDC86Q9H6F5 360 aaKnown RBP5.09□□□□□ -1.59
SF3B6-202ENST00000478050 C10orf88Q9H8K7 445 aa5.09□□□□□ -1.59
SF3B6-202ENST00000478050 KIF9Q9HAQ2 790 aa5.09□□□□□ -1.59
SF3B6-202ENST00000478050 PCDH18Q9HCL0 1135 aa5.09□□□□□ -1.59
SF3B6-202ENST00000478050 NGRNQ9NPE2 291 aaKnown RBP5.09□□□□□ -1.59
SF3B6-202ENST00000478050 MKS1Q9NXB0 559 aa5.09□□□□□ -1.59
SF3B6-202ENST00000478050 MCM8Q9UJA3 840 aa5.09□□□□□ -1.59
SF3B6-202ENST00000478050 ZNF180Q9UJW8 692 aa5.09□□□□□ -1.59
SF3B6-202ENST00000478050 GRID1Q9ULK0 1009 aa5.09□□□□□ -1.59
SF3B6-202ENST00000478050 PPM1HQ9ULR3 514 aa5.09□□□□□ -1.59
SF3B6-202ENST00000478050 RPL26L1Q9UNX3 145 aaKnown RBP5.09□□□□□ -1.59
SF3B6-202ENST00000478050 CHKBQ9Y259 395 aa5.09□□□□□ -1.59
SF3B6-202ENST00000478050 TLR6Q9Y2C9 796 aa5.09□□□□□ -1.59
SF3B6-202ENST00000478050 SLC45A1Q9Y2W3 748 aa5.09□□□□□ -1.59
SF3B6-202ENST00000478050 SHROOM3Q8TF72 1996 aa5.09□□□□□ -1.6
SF3B6-202ENST00000478050 UNC79Q9P2D8 2635 aa5.08□□□□□ -1.6
SF3B6-202ENST00000478050 TCRBV9S1A1TA0A576 114 aa5.08□□□□□ -1.6
SF3B6-202ENST00000478050 TCAF2A6NFQ2 919 aa5.08□□□□□ -1.6
SF3B6-202ENST00000478050 HACD1B0YJ81 288 aa5.08□□□□□ -1.6
SF3B6-202ENST00000478050 TRAFD1O14545 582 aaPredicted RBP5.08□□□□□ -1.6
SF3B6-202ENST00000478050 COPEO14579 308 aa5.08□□□□□ -1.6
SF3B6-202ENST00000478050 KLF11O14901 512 aa5.08□□□□□ -1.6
SF3B6-202ENST00000478050 XPOTO43592 962 aaKnown RBP5.08□□□□□ -1.6
SF3B6-202ENST00000478050 STRNO43815 780 aa5.08□□□□□ -1.6
SF3B6-202ENST00000478050 GCATO75600 419 aa5.08□□□□□ -1.6
SF3B6-202ENST00000478050 KRT38O76015 456 aa5.08□□□□□ -1.6
SF3B6-202ENST00000478050 TGDSO95455 350 aa5.08□□□□□ -1.6
SF3B6-202ENST00000478050 NPTXRO95502 500 aa5.08□□□□□ -1.6
SF3B6-202ENST00000478050 CD4P01730 458 aa5.08□□□□□ -1.6
SF3B6-202ENST00000478050 ATP5BP06576 529 aaKnown RBP5.08□□□□□ -1.6
SF3B6-202ENST00000478050 MMP3P08254 477 aa5.08□□□□□ -1.6
SF3B6-202ENST00000478050 SNRPAP09012 282 aaKnown RBP5.08□□□□□ -1.6
SF3B6-202ENST00000478050 ZNF286BP0CG31 522 aa5.08□□□□□ -1.6
SF3B6-202ENST00000478050 CCL5P13501 91 aa5.08□□□□□ -1.6
SF3B6-202ENST00000478050 PRKCHP24723 683 aa5.08□□□□□ -1.6
SF3B6-202ENST00000478050 CYP2F1P24903 491 aa5.08□□□□□ -1.6
SF3B6-202ENST00000478050 ADRA1DP25100 572 aa5.08□□□□□ -1.6
SF3B6-202ENST00000478050 RBL1P28749 1068 aa5.08□□□□□ -1.6
SF3B6-202ENST00000478050 AXLP30530 894 aa5.08□□□□□ -1.6
SF3B6-202ENST00000478050 FDFT1P37268 417 aa5.08□□□□□ -1.6
SF3B6-202ENST00000478050 CCNFP41002 786 aa5.08□□□□□ -1.6
SF3B6-202ENST00000478050 PSMC4P43686 418 aa5.08□□□□□ -1.6
SF3B6-202ENST00000478050 ACADSBP45954 432 aa5.08□□□□□ -1.6
SF3B6-202ENST00000478050 NR2C2P49116 596 aa5.08□□□□□ -1.6
SF3B6-202ENST00000478050 RPL34P49207 117 aaKnown RBP5.08□□□□□ -1.6
SF3B6-202ENST00000478050 RGS7P49802 495 aa5.08□□□□□ -1.6
SF3B6-202ENST00000478050 SERPINB9P50453 376 aa5.08□□□□□ -1.6
SF3B6-202ENST00000478050 BCAT1P54687 386 aa5.08□□□□□ -1.6
SF3B6-202ENST00000478050 YWHAZP63104 245 aaKnown RBP5.08□□□□□ -1.6
SF3B6-202ENST00000478050 SARNPP82979 210 aaKnown RBP5.08□□□□□ -1.6
SF3B6-202ENST00000478050 CDK18Q07002 472 aa5.08□□□□□ -1.6
SF3B6-202ENST00000478050 BST2Q10589 180 aaKnown RBP5.08□□□□□ -1.6
SF3B6-202ENST00000478050 DPYSL2Q16555 572 aa5.08□□□□□ -1.6
SF3B6-202ENST00000478050 KBTBD12Q3ZCT8 623 aa5.08□□□□□ -1.6
SF3B6-202ENST00000478050 SNAP47Q5SQN1 464 aa5.08□□□□□ -1.6
SF3B6-202ENST00000478050 WASHC2DQ5SRD0 308 aa5.08□□□□□ -1.6
SF3B6-202ENST00000478050 FAM91A1Q658Y4 838 aa5.08□□□□□ -1.6
SF3B6-202ENST00000478050 SCYL2Q6P3W7 929 aa5.08□□□□□ -1.6
SF3B6-202ENST00000478050 SLC27A1Q6PCB7 646 aa5.08□□□□□ -1.6
SF3B6-202ENST00000478050 C1orf228Q6PIY5 440 aa5.08□□□□□ -1.6
SF3B6-202ENST00000478050 BZW1Q7L1Q6 419 aaKnown RBP5.08□□□□□ -1.6
SF3B6-202ENST00000478050 SLC26A9Q7LBE3 791 aa5.08□□□□□ -1.6
SF3B6-202ENST00000478050 STRADAQ7RTN6 431 aa5.08□□□□□ -1.6
SF3B6-202ENST00000478050 NLRP9Q7RTR0 991 aa5.08□□□□□ -1.6
SF3B6-202ENST00000478050 NECAB2Q7Z6G3 386 aa5.08□□□□□ -1.6
SF3B6-202ENST00000478050 ZC3H18Q86VM9 953 aaKnown RBP5.08□□□□□ -1.6
SF3B6-202ENST00000478050 JAZF1Q86VZ6 243 aa5.08□□□□□ -1.6
SF3B6-202ENST00000478050 TTC30AQ86WT1 665 aa5.08□□□□□ -1.6
SF3B6-202ENST00000478050 VPS52Q8N1B4 723 aa5.08□□□□□ -1.6
SF3B6-202ENST00000478050 KIF2BQ8N4N8 673 aa5.08□□□□□ -1.6
SF3B6-202ENST00000478050 PQLC3Q8N755 202 aa5.08□□□□□ -1.6
SF3B6-202ENST00000478050 CFAP61Q8NHU2 1237 aa5.08□□□□□ -1.6
SF3B6-202ENST00000478050 PCDH19Q8TAB3 1148 aa5.08□□□□□ -1.6
SF3B6-202ENST00000478050 RAB3IL1Q8TBN0 382 aa5.08□□□□□ -1.6
SF3B6-202ENST00000478050 FAM172AQ8WUF8 416 aa5.08□□□□□ -1.6
SF3B6-202ENST00000478050 SLC35F5Q8WV83 523 aa5.08□□□□□ -1.6
SF3B6-202ENST00000478050 CENPIQ92674 756 aaPredicted RBP5.08□□□□□ -1.6
SF3B6-202ENST00000478050 RELTQ969Z4 430 aa5.08□□□□□ -1.6
SF3B6-202ENST00000478050 ZBTB10Q96DT7 871 aa5.08□□□□□ -1.6
SF3B6-202ENST00000478050 MTBPQ96DY7 904 aa5.08□□□□□ -1.6
SF3B6-202ENST00000478050 CFAP36Q96G28 342 aa5.08□□□□□ -1.6
SF3B6-202ENST00000478050 ZNF560Q96MR9 790 aa5.08□□□□□ -1.6
SF3B6-202ENST00000478050 ANKRD27Q96NW4 1050 aa5.08□□□□□ -1.6
SF3B6-202ENST00000478050 QKIQ96PU8 341 aaKnown RBP eCLIP5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms