RNA–Protein interactions for RNA: ENST00000477983.1

LMBR1-216, Transcript of limb development membrane protein 1, humanhuman

TSL 2

Gene LMBR1, Length 605 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-216ENST00000477983 CCZ1P86791 482 aaPredicted RBP4.98□□□□□ -1.61
LMBR1-216ENST00000477983 CLCA4Q14CN2 919 aa4.98□□□□□ -1.61
LMBR1-216ENST00000477983 FAM110CQ1W6H9 321 aa4.98□□□□□ -1.61
LMBR1-216ENST00000477983 GFOD2Q3B7J2 385 aa4.98□□□□□ -1.61
LMBR1-216ENST00000477983 TUBB8Q3ZCM7 444 aa4.98□□□□□ -1.61
LMBR1-216ENST00000477983 SLC9C1Q4G0N8 1177 aa4.98□□□□□ -1.61
LMBR1-216ENST00000477983 MCMDC2Q4G0Z9 681 aa4.98□□□□□ -1.61
LMBR1-216ENST00000477983 EARS2Q5JPH6 523 aaKnown RBP4.98□□□□□ -1.61
LMBR1-216ENST00000477983 MANEALQ5VSG8 457 aa4.98□□□□□ -1.61
LMBR1-216ENST00000477983 NOL8Q76FK4 1167 aaKnown RBP4.98□□□□□ -1.61
LMBR1-216ENST00000477983 ENGASEQ8NFI3 743 aa4.98□□□□□ -1.61
LMBR1-216ENST00000477983 MRPS27Q92552 414 aaKnown RBP4.98□□□□□ -1.61
LMBR1-216ENST00000477983 SNX22Q96L94 193 aa4.98□□□□□ -1.61
LMBR1-216ENST00000477983 UTP14AQ9BVJ6 771 aaKnown RBP4.98□□□□□ -1.61
LMBR1-216ENST00000477983 SELENOOQ9BVL4 669 aa4.98□□□□□ -1.61
LMBR1-216ENST00000477983 USP29Q9HBJ7 922 aa4.98□□□□□ -1.61
LMBR1-216ENST00000477983 GPR108Q9NPR9 543 aa4.98□□□□□ -1.61
LMBR1-216ENST00000477983 ZNF212Q9UDV6 495 aa4.98□□□□□ -1.61
LMBR1-216ENST00000477983 FRMPD2Q68DX3 1309 aaPredicted RBP4.97□□□□□ -1.61
LMBR1-216ENST00000477983 SH3TC1Q8TE82 1336 aa4.97□□□□□ -1.61
LMBR1-216ENST00000477983 CNTNAP2Q9UHC6 1331 aa4.97□□□□□ -1.61
LMBR1-216ENST00000477983 ATRNO75882 1429 aa4.97□□□□□ -1.61
LMBR1-216ENST00000477983 THSD7AQ9UPZ6 1657 aa4.97□□□□□ -1.61
LMBR1-216ENST00000477983 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.97□□□□□ -1.61
LMBR1-216ENST00000477983 GOLGA6CA6NDK9 693 aa4.97□□□□□ -1.61
LMBR1-216ENST00000477983 GOLGA6BA6NDN3 693 aa4.97□□□□□ -1.61
LMBR1-216ENST00000477983 STX10O60499 249 aa4.97□□□□□ -1.61
LMBR1-216ENST00000477983 TULP3O75386 442 aa4.97□□□□□ -1.61
LMBR1-216ENST00000477983 TAF5LO75529 589 aa4.97□□□□□ -1.61
LMBR1-216ENST00000477983 GOLGA6DP0CG33 693 aa4.97□□□□□ -1.61
LMBR1-216ENST00000477983 RPL17P18621 184 aaKnown RBP4.97□□□□□ -1.61
LMBR1-216ENST00000477983 CMA1P23946 247 aa4.97□□□□□ -1.61
LMBR1-216ENST00000477983 HTR7P34969 479 aa4.97□□□□□ -1.61
LMBR1-216ENST00000477983 YPEL5P62699 121 aa4.97□□□□□ -1.61
LMBR1-216ENST00000477983 TFCP2Q12800 502 aa4.97□□□□□ -1.61
LMBR1-216ENST00000477983 STIM1Q13586 685 aa4.97□□□□□ -1.61
LMBR1-216ENST00000477983 BRD3Q15059 726 aa4.97□□□□□ -1.61
LMBR1-216ENST00000477983 CAMK4Q16566 473 aa4.97□□□□□ -1.61
LMBR1-216ENST00000477983 PFKFB3Q16875 520 aaPredicted RBP4.97□□□□□ -1.61
LMBR1-216ENST00000477983 ADCK5Q3MIX3 580 aa4.97□□□□□ -1.61
LMBR1-216ENST00000477983 TMED8Q6PL24 325 aaPredicted RBP4.97□□□□□ -1.61
LMBR1-216ENST00000477983 DHX40Q8IX18 779 aaKnown RBP4.97□□□□□ -1.61
LMBR1-216ENST00000477983 ZNF34Q8IZ26 560 aa4.97□□□□□ -1.61
LMBR1-216ENST00000477983 SDR16C5Q8N3Y7 309 aa4.97□□□□□ -1.61
LMBR1-216ENST00000477983 IQUBQ8NA54 791 aa4.97□□□□□ -1.61
LMBR1-216ENST00000477983 MNS1Q8NEH6 495 aa4.97□□□□□ -1.61
LMBR1-216ENST00000477983 BCAS4Q8TDM0 211 aa4.97□□□□□ -1.61
LMBR1-216ENST00000477983 EXOC4Q96A65 974 aa4.97□□□□□ -1.61
LMBR1-216ENST00000477983 P2RY11Q96G91 374 aa4.97□□□□□ -1.61
LMBR1-216ENST00000477983 SDF4Q9BRK5 362 aa4.97□□□□□ -1.61
LMBR1-216ENST00000477983 FSD1Q9BTV5 496 aa4.97□□□□□ -1.61
LMBR1-216ENST00000477983 NAA15Q9BXJ9 866 aaKnown RBP4.97□□□□□ -1.61
LMBR1-216ENST00000477983 FAM107BQ9H098 131 aa4.97□□□□□ -1.61
LMBR1-216ENST00000477983 BTBD1Q9H0C5 482 aa4.97□□□□□ -1.61
LMBR1-216ENST00000477983 GOLGA6AQ9NYA3 693 aa4.97□□□□□ -1.61
LMBR1-216ENST00000477983 TRMT112Q9UI30 125 aaKnown RBP4.97□□□□□ -1.61
LMBR1-216ENST00000477983 ZNF215Q9UL58 517 aaPredicted RBP4.97□□□□□ -1.61
LMBR1-216ENST00000477983 HPSEQ9Y251 543 aa4.97□□□□□ -1.61
LMBR1-216ENST00000477983 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.97□□□□□ -1.61
LMBR1-216ENST00000477983 ABCC12Q96J65 1359 aa4.96□□□□□ -1.62
LMBR1-216ENST00000477983 NUP98P52948 1817 aa4.96□□□□□ -1.62
LMBR1-216ENST00000477983 FAM237AA0A1B0GTK4 181 aa4.96□□□□□ -1.62
LMBR1-216ENST00000477983 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.96□□□□□ -1.62
LMBR1-216ENST00000477983 H3BNX3 289 aa4.96□□□□□ -1.62
LMBR1-216ENST00000477983 EYA2O00167 538 aa4.96□□□□□ -1.62
LMBR1-216ENST00000477983 CA12O43570 354 aa4.96□□□□□ -1.62
LMBR1-216ENST00000477983 PRAMEF2O60811 474 aa4.96□□□□□ -1.62
LMBR1-216ENST00000477983 PPP6R2O75170 966 aa4.96□□□□□ -1.62
LMBR1-216ENST00000477983 ERLIN1O75477 346 aa4.96□□□□□ -1.62
LMBR1-216ENST00000477983 EIF3JO75822 258 aaKnown RBP4.96□□□□□ -1.62
LMBR1-216ENST00000477983 CAMTA2O94983 1202 aa4.96□□□□□ -1.62
LMBR1-216ENST00000477983 LARGE1O95461 756 aa4.96□□□□□ -1.62
LMBR1-216ENST00000477983 ZFYP08048 801 aaPredicted RBP4.96□□□□□ -1.62
LMBR1-216ENST00000477983 SLC3A2P08195 630 aaKnown RBP4.96□□□□□ -1.62
LMBR1-216ENST00000477983 FGF2P09038 288 aa4.96□□□□□ -1.62
LMBR1-216ENST00000477983 RHCEP18577 417 aa4.96□□□□□ -1.62
LMBR1-216ENST00000477983 RHDQ02161 417 aa4.96□□□□□ -1.62
LMBR1-216ENST00000477983 LRMPQ12912 555 aa4.96□□□□□ -1.62
LMBR1-216ENST00000477983 IFIT5Q13325 482 aaKnown RBP4.96□□□□□ -1.62
LMBR1-216ENST00000477983 SEMA5AQ13591 1074 aa4.96□□□□□ -1.62
LMBR1-216ENST00000477983 ERV3-1Q14264 604 aa4.96□□□□□ -1.62
LMBR1-216ENST00000477983 CCDC57Q2TAC2 916 aa4.96□□□□□ -1.62
LMBR1-216ENST00000477983 LRRC24Q50LG9 513 aa4.96□□□□□ -1.62
LMBR1-216ENST00000477983 SUSD4Q5VX71 490 aa4.96□□□□□ -1.62
LMBR1-216ENST00000477983 KIAA1161Q6NSJ0 714 aa4.96□□□□□ -1.62
LMBR1-216ENST00000477983 SYNE3Q6ZMZ3 975 aa4.96□□□□□ -1.62
LMBR1-216ENST00000477983 SMIM5Q71RC9 77 aa4.96□□□□□ -1.62
LMBR1-216ENST00000477983 MMP21Q8N119 569 aa4.96□□□□□ -1.62
LMBR1-216ENST00000477983 TRIML1Q8N9V2 468 aa4.96□□□□□ -1.62
LMBR1-216ENST00000477983 FAM71DQ8N9W8 422 aa4.96□□□□□ -1.62
LMBR1-216ENST00000477983 FAM227BQ96M60 508 aa4.96□□□□□ -1.62
LMBR1-216ENST00000477983 NEUROD6Q96NK8 337 aa4.96□□□□□ -1.62
LMBR1-216ENST00000477983 CAMK1GQ96NX5 476 aa4.96□□□□□ -1.62
LMBR1-216ENST00000477983 STRBPQ96SI9 672 aaKnown RBP4.96□□□□□ -1.62
LMBR1-216ENST00000477983 PUS3Q9BZE2 481 aaKnown RBP4.96□□□□□ -1.62
LMBR1-216ENST00000477983 UBXN6Q9BZV1 441 aa4.96□□□□□ -1.62
LMBR1-216ENST00000477983 IL25Q9H293 177 aa4.96□□□□□ -1.62
LMBR1-216ENST00000477983 ARFGAP3Q9NP61 516 aa4.96□□□□□ -1.62
LMBR1-216ENST00000477983 WWOXQ9NZC7 414 aa4.96□□□□□ -1.62
LMBR1-216ENST00000477983 MYO1AQ9UBC5 1043 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms