RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 CCDC197Q8NCU1 140 aa8.09□□□□□ -1.11
VMA21-203ENST00000477649 RAB3IL1Q8TBN0 382 aa8.09□□□□□ -1.11
VMA21-203ENST00000477649 PHOSPHO2Q8TCD6 241 aa8.09□□□□□ -1.11
VMA21-203ENST00000477649 DEPDC1BQ8WUY9 529 aa8.09□□□□□ -1.11
VMA21-203ENST00000477649 ARNTL2Q8WYA1 636 aa8.09□□□□□ -1.11
VMA21-203ENST00000477649 PEX13Q92968 403 aa8.09□□□□□ -1.11
VMA21-203ENST00000477649 APOPT1Q96IL0 206 aa8.09□□□□□ -1.11
VMA21-203ENST00000477649 PAWRQ96IZ0 340 aaKnown RBP8.09□□□□□ -1.11
VMA21-203ENST00000477649 RPRD1AQ96P16 312 aaPredicted RBP8.09□□□□□ -1.11
VMA21-203ENST00000477649 AGAP3Q96P47 875 aa8.09□□□□□ -1.11
VMA21-203ENST00000477649 YME1L1Q96TA2 773 aa8.09□□□□□ -1.11
VMA21-203ENST00000477649 CPNE1Q99829 537 aa8.09□□□□□ -1.11
VMA21-203ENST00000477649 KIFC1Q9BW19 673 aa8.09□□□□□ -1.11
VMA21-203ENST00000477649 KRTAP4-6Q9BYQ5 205 aa8.09□□□□□ -1.11
VMA21-203ENST00000477649 IQCGQ9H095 443 aaKnown RBP8.09□□□□□ -1.11
VMA21-203ENST00000477649 SP110Q9HB58 689 aa8.09□□□□□ -1.11
VMA21-203ENST00000477649 CYP4F11Q9HBI6 524 aa8.09□□□□□ -1.11
VMA21-203ENST00000477649 ARNT2Q9HBZ2 717 aa8.09□□□□□ -1.11
VMA21-203ENST00000477649 RBM22Q9NW64 420 aaKnown RBP eCLIP8.09□□□□□ -1.11
VMA21-203ENST00000477649 PRKAG2Q9UGJ0 569 aa8.09□□□□□ -1.11
VMA21-203ENST00000477649 STOML2Q9UJZ1 356 aa8.09□□□□□ -1.11
VMA21-203ENST00000477649 SOX13Q9UN79 622 aa8.09□□□□□ -1.11
VMA21-203ENST00000477649 LZTS1Q9Y250 596 aa8.09□□□□□ -1.11
VMA21-203ENST00000477649 ZNF510Q9Y2H8 683 aa8.09□□□□□ -1.11
VMA21-203ENST00000477649 YIPF1Q9Y548 306 aa8.09□□□□□ -1.11
VMA21-203ENST00000477649 CXorf51AA0A1B0GTR3 108 aa8.08□□□□□ -1.12
VMA21-203ENST00000477649 ILVBLA1L0T0 632 aa8.08□□□□□ -1.12
VMA21-203ENST00000477649 TYW5A2RUC4 315 aaKnown RBP8.08□□□□□ -1.12
VMA21-203ENST00000477649 PRRG1O14668 218 aa8.08□□□□□ -1.12
VMA21-203ENST00000477649 KLF11O14901 512 aa8.08□□□□□ -1.12
VMA21-203ENST00000477649 TIMM44O43615 452 aa8.08□□□□□ -1.12
VMA21-203ENST00000477649 LPXNO60711 386 aa8.08□□□□□ -1.12
VMA21-203ENST00000477649 BANF1O75531 89 aa8.08□□□□□ -1.12
VMA21-203ENST00000477649 IL1BP01584 269 aa8.08□□□□□ -1.12
VMA21-203ENST00000477649 CTSAP10619 480 aa8.08□□□□□ -1.12
VMA21-203ENST00000477649 HMGA1P17096 107 aaKnown RBP8.08□□□□□ -1.12
VMA21-203ENST00000477649 TACR2P21452 398 aa8.08□□□□□ -1.12
VMA21-203ENST00000477649 MGAT1P26572 445 aa8.08□□□□□ -1.12
VMA21-203ENST00000477649 OR1E1P30953 314 aa8.08□□□□□ -1.12
VMA21-203ENST00000477649 SPRP35270 261 aaPredicted RBP8.08□□□□□ -1.12
VMA21-203ENST00000477649 PBX3P40426 434 aa8.08□□□□□ -1.12
VMA21-203ENST00000477649 PGFP49763 221 aa8.08□□□□□ -1.12
VMA21-203ENST00000477649 PAPOLAP51003 745 aaKnown RBP8.08□□□□□ -1.12
VMA21-203ENST00000477649 SEC24CP53992 1094 aa8.08□□□□□ -1.12
VMA21-203ENST00000477649 CSE1LP55060 971 aaKnown RBP8.08□□□□□ -1.12
VMA21-203ENST00000477649 OXCT1P55809 520 aa8.08□□□□□ -1.12
VMA21-203ENST00000477649 SESN2P58004 480 aaPredicted RBP8.08□□□□□ -1.12
VMA21-203ENST00000477649 HTRA4P83105 476 aaPredicted RBP8.08□□□□□ -1.12
VMA21-203ENST00000477649 NIPAL4Q0D2K0 466 aa8.08□□□□□ -1.12
VMA21-203ENST00000477649 ZBTB17Q13105 803 aa8.08□□□□□ -1.12
VMA21-203ENST00000477649 SERINC3Q13530 473 aa8.08□□□□□ -1.12
VMA21-203ENST00000477649 POLD3Q15054 466 aaPredicted RBP8.08□□□□□ -1.12
VMA21-203ENST00000477649 LRRC26Q2I0M4 334 aa8.08□□□□□ -1.12
VMA21-203ENST00000477649 ARTNQ5T4W7 220 aa8.08□□□□□ -1.12
VMA21-203ENST00000477649 PDPK2PQ6A1A2 396 aa8.08□□□□□ -1.12
VMA21-203ENST00000477649 KYAT3Q6YP21 454 aaKnown RBP8.08□□□□□ -1.12
VMA21-203ENST00000477649 C14orf80Q86SX3 495 aa8.08□□□□□ -1.12
VMA21-203ENST00000477649 SETD3Q86TU7 594 aaPredicted RBP8.08□□□□□ -1.12
VMA21-203ENST00000477649 MIB1Q86YT6 1006 aa8.08□□□□□ -1.12
VMA21-203ENST00000477649 AGGF1Q8N302 714 aaeCLIP8.08□□□□□ -1.12
VMA21-203ENST00000477649 FIBCD1Q8N539 461 aa8.08□□□□□ -1.12
VMA21-203ENST00000477649 TTC9BQ8N6N2 239 aa8.08□□□□□ -1.12
VMA21-203ENST00000477649 CNTD1Q8N815 330 aa8.08□□□□□ -1.12
VMA21-203ENST00000477649 ANKRD42Q8N9B4 389 aa8.08□□□□□ -1.12
VMA21-203ENST00000477649 PPHLN1Q8NEY8 458 aaKnown RBP8.08□□□□□ -1.12
VMA21-203ENST00000477649 ZNF398Q8TD17 642 aa8.08□□□□□ -1.12
VMA21-203ENST00000477649 LRRC8CQ8TDW0 803 aa8.08□□□□□ -1.12
VMA21-203ENST00000477649 DIS3LQ8TF46 1054 aaKnown RBP8.08□□□□□ -1.12
VMA21-203ENST00000477649 GIPC2Q8TF65 315 aa8.08□□□□□ -1.12
VMA21-203ENST00000477649 SCG3Q8WXD2 468 aaKnown RBP8.08□□□□□ -1.12
VMA21-203ENST00000477649 PSMG2Q969U7 264 aa8.08□□□□□ -1.12
VMA21-203ENST00000477649 VWCEQ96DN2 955 aa8.08□□□□□ -1.12
VMA21-203ENST00000477649 CERS2Q96G23 380 aa8.08□□□□□ -1.12
VMA21-203ENST00000477649 CELF6Q96J87 481 aaKnown RBP8.08□□□□□ -1.12
VMA21-203ENST00000477649 SEC16BQ96JE7 1060 aa8.08□□□□□ -1.12
VMA21-203ENST00000477649 B3GALT6Q96L58 329 aa8.08□□□□□ -1.12
VMA21-203ENST00000477649 TGS1Q96RS0 853 aaKnown RBP8.08□□□□□ -1.12
VMA21-203ENST00000477649 RANBP9Q96S59 729 aa8.08□□□□□ -1.12
VMA21-203ENST00000477649 TBL1YQ9BQ87 522 aa8.08□□□□□ -1.12
VMA21-203ENST00000477649 MLPHQ9BV36 600 aaPredicted RBP8.08□□□□□ -1.12
VMA21-203ENST00000477649 VN1R3Q9BXE9 311 aa8.08□□□□□ -1.12
VMA21-203ENST00000477649 FSD1LQ9BXM9 530 aa8.08□□□□□ -1.12
VMA21-203ENST00000477649 MTIF3Q9H2K0 278 aaKnown RBP8.08□□□□□ -1.12
VMA21-203ENST00000477649 CRISPLD1Q9H336 500 aa8.08□□□□□ -1.12
VMA21-203ENST00000477649 ZFATQ9P243 1243 aa8.08□□□□□ -1.12
VMA21-203ENST00000477649 PRKAG3Q9UGI9 489 aa8.08□□□□□ -1.12
VMA21-203ENST00000477649 DCDC2Q9UHG0 476 aa8.08□□□□□ -1.12
VMA21-203ENST00000477649 ZMYM5Q9UJ78 669 aa8.08□□□□□ -1.12
VMA21-203ENST00000477649 INSL6Q9Y581 213 aa8.08□□□□□ -1.12
VMA21-203ENST00000477649 SNX10Q9Y5X0 201 aa8.08□□□□□ -1.12
VMA21-203ENST00000477649 MRPL42Q9Y6G3 142 aaKnown RBP8.08□□□□□ -1.12
VMA21-203ENST00000477649 RPS6KL1Q9Y6S9 549 aa8.08□□□□□ -1.12
VMA21-203ENST00000477649 FNDC1Q4ZHG4 1894 aaPredicted RBP8.08□□□□□ -1.12
VMA21-203ENST00000477649 MICAL3Q7RTP6 2002 aa8.08□□□□□ -1.12
VMA21-203ENST00000477649 LTBP2Q14767 1821 aa8.08□□□□□ -1.12
VMA21-203ENST00000477649 A0A1B0GVM2 712 aa8.07□□□□□ -1.12
VMA21-203ENST00000477649 TCAF2A6NFQ2 919 aa8.07□□□□□ -1.12
VMA21-203ENST00000477649 TRIM49D1C9J1S8 452 aa8.07□□□□□ -1.12
VMA21-203ENST00000477649 COPEO14579 308 aa8.07□□□□□ -1.12
VMA21-203ENST00000477649 BIRC5O15392 142 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms