RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 RNF112Q9ULX5 631 aa11.2□□□□□ -0.62
COL27A1-204ENST00000477421 C9IYK1 514 aa11.2□□□□□ -0.62
COL27A1-204ENST00000477421 DAB1O75553 588 aa11.2□□□□□ -0.62
COL27A1-204ENST00000477421 SOAT2O75908 522 aa11.2□□□□□ -0.62
COL27A1-204ENST00000477421 BAIAP3O94812 1187 aa11.2□□□□□ -0.62
COL27A1-204ENST00000477421 SERPINF2P08697 491 aa11.2□□□□□ -0.62
COL27A1-204ENST00000477421 FGFR1P11362 822 aa11.2□□□□□ -0.62
COL27A1-204ENST00000477421 PPARGP37231 505 aaPredicted RBP11.2□□□□□ -0.62
COL27A1-204ENST00000477421 PTPN9P43378 593 aa11.2□□□□□ -0.62
COL27A1-204ENST00000477421 SLC11A2P49281 568 aa11.2□□□□□ -0.62
COL27A1-204ENST00000477421 ZNF132P52740 706 aa11.2□□□□□ -0.62
COL27A1-204ENST00000477421 GJA9P57773 515 aa11.2□□□□□ -0.62
COL27A1-204ENST00000477421 PRKAA1Q13131 559 aa11.2□□□□□ -0.62
COL27A1-204ENST00000477421 RNF219Q5W0B1 726 aaPredicted RBP11.2□□□□□ -0.62
COL27A1-204ENST00000477421 OLFML2BQ68BL8 750 aa11.2□□□□□ -0.62
COL27A1-204ENST00000477421 ZNF280DQ6N043 979 aa11.2□□□□□ -0.62
COL27A1-204ENST00000477421 TDRPQ86YL5 185 aa11.2□□□□□ -0.62
COL27A1-204ENST00000477421 CARNMT1Q8N4J0 409 aa11.2□□□□□ -0.62
COL27A1-204ENST00000477421 DQX1Q8TE96 717 aaKnown RBP11.2□□□□□ -0.62
COL27A1-204ENST00000477421 ZBTB18Q99592 522 aa11.2□□□□□ -0.62
COL27A1-204ENST00000477421 ING2Q9H160 280 aa11.2□□□□□ -0.62
COL27A1-204ENST00000477421 DSEQ9UL01 958 aa11.2□□□□□ -0.62
COL27A1-204ENST00000477421 NENFQ9UMX5 172 aa11.2□□□□□ -0.62
COL27A1-204ENST00000477421 MEIS3P2A8K0S8 358 aa11.2□□□□□ -0.62
COL27A1-204ENST00000477421 NRP1O14786 923 aa11.2□□□□□ -0.62
COL27A1-204ENST00000477421 RAG1P15918 1043 aa11.2□□□□□ -0.62
COL27A1-204ENST00000477421 GRK4P32298 578 aa11.2□□□□□ -0.62
COL27A1-204ENST00000477421 ALDH1A3P47895 512 aa11.2□□□□□ -0.62
COL27A1-204ENST00000477421 SCIMPQ6UWF3 145 aa11.2□□□□□ -0.62
COL27A1-204ENST00000477421 TMEM110Q86TL2 294 aa11.2□□□□□ -0.62
COL27A1-204ENST00000477421 PQLC3Q8N755 202 aa11.2□□□□□ -0.62
COL27A1-204ENST00000477421 SNX31Q8N9S9 440 aa11.2□□□□□ -0.62
COL27A1-204ENST00000477421 SERPINB11Q96P15 392 aa11.2□□□□□ -0.62
COL27A1-204ENST00000477421 CAAP1Q9H8G2 361 aa11.2□□□□□ -0.62
COL27A1-204ENST00000477421 ABCC13Q9NSE7 274 aa11.2□□□□□ -0.62
COL27A1-204ENST00000477421 TAS2R1Q9NYW7 299 aa11.2□□□□□ -0.62
COL27A1-204ENST00000477421 VPS28Q9UK41 221 aa11.2□□□□□ -0.62
COL27A1-204ENST00000477421 KCNH4Q9UQ05 1017 aa11.2□□□□□ -0.62
COL27A1-204ENST00000477421 STRCQ7RTU9 1775 aa11.2□□□□□ -0.62
COL27A1-204ENST00000477421 MANSC4A6NHS7 340 aaPredicted RBP11.19□□□□□ -0.62
COL27A1-204ENST00000477421 TRPC5OSA6NMA1 111 aa11.19□□□□□ -0.62
COL27A1-204ENST00000477421 TBKBP1A7MCY6 615 aa11.19□□□□□ -0.62
COL27A1-204ENST00000477421 UBDO15205 165 aa11.19□□□□□ -0.62
COL27A1-204ENST00000477421 MPSTP25325 297 aa11.19□□□□□ -0.62
COL27A1-204ENST00000477421 WNT3AP56704 352 aa11.19□□□□□ -0.62
COL27A1-204ENST00000477421 DENND6AQ8IWF6 608 aa11.19□□□□□ -0.62
COL27A1-204ENST00000477421 TP53INP2Q8IXH6 220 aa11.19□□□□□ -0.62
COL27A1-204ENST00000477421 TOP6BLQ8N6T0 577 aa11.19□□□□□ -0.62
COL27A1-204ENST00000477421 PCSK9Q8NBP7 692 aaKnown RBP11.19□□□□□ -0.62
COL27A1-204ENST00000477421 ABTB1Q969K4 478 aaPredicted RBP11.19□□□□□ -0.62
COL27A1-204ENST00000477421 GCNAQ96QF7 691 aa11.19□□□□□ -0.62
COL27A1-204ENST00000477421 SEMA3CQ99985 751 aa11.19□□□□□ -0.62
COL27A1-204ENST00000477421 SLC4A5Q9BY07 1137 aa11.19□□□□□ -0.62
COL27A1-204ENST00000477421 CCDC90BQ9GZT6 254 aa11.19□□□□□ -0.62
COL27A1-204ENST00000477421 LRMDAQ9H2I8 198 aa11.19□□□□□ -0.62
COL27A1-204ENST00000477421 HBS1LQ9Y450 684 aaKnown RBP11.19□□□□□ -0.62
COL27A1-204ENST00000477421 ANKRD12Q6UB98 2062 aa11.19□□□□□ -0.62
COL27A1-204ENST00000477421 ARL5CA6NH57 179 aa11.19□□□□□ -0.62
COL27A1-204ENST00000477421 MGRN1O60291 552 aa11.19□□□□□ -0.62
COL27A1-204ENST00000477421 TRIM16O95361 564 aa11.19□□□□□ -0.62
COL27A1-204ENST00000477421 GUCA1CO95843 209 aa11.19□□□□□ -0.62
COL27A1-204ENST00000477421 MPOP05164 745 aa11.19□□□□□ -0.62
COL27A1-204ENST00000477421 PRKAR2AP13861 404 aaKnown RBP11.19□□□□□ -0.62
COL27A1-204ENST00000477421 WEE1P30291 646 aa11.19□□□□□ -0.62
COL27A1-204ENST00000477421 AKT1P31749 480 aa11.19□□□□□ -0.62
COL27A1-204ENST00000477421 PBX3P40426 434 aa11.19□□□□□ -0.62
COL27A1-204ENST00000477421 OXCT1P55809 520 aa11.19□□□□□ -0.62
COL27A1-204ENST00000477421 POU4F1Q01851 419 aa11.19□□□□□ -0.62
COL27A1-204ENST00000477421 SREBF2Q12772 1141 aa11.19□□□□□ -0.62
COL27A1-204ENST00000477421 TIGD5Q53EQ6 642 aa11.19□□□□□ -0.62
COL27A1-204ENST00000477421 SPRYD7Q5W111 196 aa11.19□□□□□ -0.62
COL27A1-204ENST00000477421 CLEC20AQ6ZU45 233 aa11.19□□□□□ -0.62
COL27A1-204ENST00000477421 TAC4Q86UU9 113 aa11.19□□□□□ -0.62
COL27A1-204ENST00000477421 PCYOX1LQ8NBM8 494 aa11.19□□□□□ -0.62
COL27A1-204ENST00000477421 HDAC10Q969S8 669 aa11.19□□□□□ -0.62
COL27A1-204ENST00000477421 TMEM169Q96HH4 297 aa11.19□□□□□ -0.62
COL27A1-204ENST00000477421 QKIQ96PU8 341 aaKnown RBP eCLIP11.19□□□□□ -0.62
COL27A1-204ENST00000477421 VAT1Q99536 393 aa11.19□□□□□ -0.62
COL27A1-204ENST00000477421 C16orf70Q9BSU1 422 aa11.19□□□□□ -0.62
COL27A1-204ENST00000477421 TXLNGYQ9BZA5 131 aa11.19□□□□□ -0.62
COL27A1-204ENST00000477421 ATP13A1Q9HD20 1204 aa11.19□□□□□ -0.62
COL27A1-204ENST00000477421 RRN3Q9NYV6 651 aa11.19□□□□□ -0.62
COL27A1-204ENST00000477421 WARS2Q9UGM6 360 aaKnown RBP11.19□□□□□ -0.62
COL27A1-204ENST00000477421 APPL1Q9UKG1 709 aa11.19□□□□□ -0.62
COL27A1-204ENST00000477421 PYGLP06737 847 aa11.19□□□□□ -0.62
COL27A1-204ENST00000477421 ACADSP16219 412 aa11.19□□□□□ -0.62
COL27A1-204ENST00000477421 EDNRBP24530 442 aa11.19□□□□□ -0.62
COL27A1-204ENST00000477421 NMBRP28336 390 aa11.19□□□□□ -0.62
COL27A1-204ENST00000477421 RPL14P50914 215 aaKnown RBP11.19□□□□□ -0.62
COL27A1-204ENST00000477421 MPP1Q00013 466 aa11.19□□□□□ -0.62
COL27A1-204ENST00000477421 STX5Q13190 355 aa11.19□□□□□ -0.62
COL27A1-204ENST00000477421 TBCCQ15814 346 aa11.19□□□□□ -0.62
COL27A1-204ENST00000477421 PFKFB4Q16877 469 aa11.19□□□□□ -0.62
COL27A1-204ENST00000477421 PCID2Q5JVF3 399 aa11.19□□□□□ -0.62
COL27A1-204ENST00000477421 FSTL4Q6MZW2 842 aa11.19□□□□□ -0.62
COL27A1-204ENST00000477421 ESRP1Q6NXG1 681 aaKnown RBP11.19□□□□□ -0.62
COL27A1-204ENST00000477421 RINLQ6ZS11 566 aa11.19□□□□□ -0.62
COL27A1-204ENST00000477421 CDHR3Q6ZTQ4 885 aa11.19□□□□□ -0.62
COL27A1-204ENST00000477421 CIR1Q86X95 450 aaPredicted RBP11.19□□□□□ -0.62
COL27A1-204ENST00000477421 ULK2Q8IYT8 1036 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms