RNA–Protein interactions for RNA: ENST00000477182.5

LSM2-212, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-212ENST00000477182 OLFM2O95897 454 aa11.9□□□□□ -0.5
LSM2-212ENST00000477182 F9P00740 461 aa11.9□□□□□ -0.5
LSM2-212ENST00000477182 IRF1P10914 325 aa11.9□□□□□ -0.5
LSM2-212ENST00000477182 ADH5P11766 374 aa11.9□□□□□ -0.5
LSM2-212ENST00000477182 TNNT1P13805 278 aa11.9□□□□□ -0.5
LSM2-212ENST00000477182 MSNP26038 577 aaKnown RBP11.9□□□□□ -0.5
LSM2-212ENST00000477182 MAOBP27338 520 aa11.9□□□□□ -0.5
LSM2-212ENST00000477182 MIPP30301 263 aa11.9□□□□□ -0.5
LSM2-212ENST00000477182 NTSR1P30989 418 aa11.9□□□□□ -0.5
LSM2-212ENST00000477182 GJC1P36383 396 aa11.9□□□□□ -0.5
LSM2-212ENST00000477182 TBX4P57082 545 aa11.9□□□□□ -0.5
LSM2-212ENST00000477182 TAS2R40P59535 323 aa11.9□□□□□ -0.5
LSM2-212ENST00000477182 SEMG2Q02383 582 aa11.9□□□□□ -0.5
LSM2-212ENST00000477182 KDSRQ06136 332 aa11.9□□□□□ -0.5
LSM2-212ENST00000477182 MESP2Q0VG99 397 aa11.9□□□□□ -0.5
LSM2-212ENST00000477182 TRIP4Q15650 581 aaPredicted RBP11.9□□□□□ -0.5
LSM2-212ENST00000477182 PTPRNQ16849 979 aa11.9□□□□□ -0.5
LSM2-212ENST00000477182 HLA-BQ31612 363 aa11.9□□□□□ -0.5
LSM2-212ENST00000477182 ZC3H12AQ5D1E8 599 aaKnown RBP11.9□□□□□ -0.5
LSM2-212ENST00000477182 ZNF569Q5MCW4 686 aa11.9□□□□□ -0.5
LSM2-212ENST00000477182 SCYL2Q6P3W7 929 aa11.9□□□□□ -0.5
LSM2-212ENST00000477182 PCSK4Q6UW60 755 aa11.9□□□□□ -0.5
LSM2-212ENST00000477182 SND1Q7KZF4 910 aaKnown RBP eCLIP11.9□□□□□ -0.5
LSM2-212ENST00000477182 SLFN11Q7Z7L1 901 aa11.9□□□□□ -0.5
LSM2-212ENST00000477182 FAM131BQ86XD5 332 aa11.9□□□□□ -0.5
LSM2-212ENST00000477182 SYCE1Q8N0S2 351 aa11.9□□□□□ -0.5
LSM2-212ENST00000477182 SLC35F6Q8N357 371 aa11.9□□□□□ -0.5
LSM2-212ENST00000477182 FAM181AQ8N9Y4 354 aa11.9□□□□□ -0.5
LSM2-212ENST00000477182 TRIM58Q8NG06 486 aa11.9□□□□□ -0.5
LSM2-212ENST00000477182 SNIP1Q8TAD8 396 aaKnown RBP11.9□□□□□ -0.5
LSM2-212ENST00000477182 RNF34Q969K3 372 aa11.9□□□□□ -0.5
LSM2-212ENST00000477182 PEBP4Q96S96 227 aa11.9□□□□□ -0.5
LSM2-212ENST00000477182 KLF16Q9BXK1 252 aaPredicted RBP11.9□□□□□ -0.5
LSM2-212ENST00000477182 IL21RQ9HBE5 538 aa11.9□□□□□ -0.5
LSM2-212ENST00000477182 PCSK1NQ9UHG2 260 aa11.9□□□□□ -0.5
LSM2-212ENST00000477182 TLR6Q9Y2C9 796 aa11.9□□□□□ -0.5
LSM2-212ENST00000477182 FNDC3AQ9Y2H6 1198 aaKnown RBP11.9□□□□□ -0.5
LSM2-212ENST00000477182 HBS1LQ9Y450 684 aaKnown RBP11.9□□□□□ -0.5
LSM2-212ENST00000477182 CPQQ9Y646 472 aa11.9□□□□□ -0.5
LSM2-212ENST00000477182 AK5Q9Y6K8 562 aa11.9□□□□□ -0.5
LSM2-212ENST00000477182 MGAQ8IWI9 3026 aa11.89□□□□□ -0.51
LSM2-212ENST00000477182 CABIN1Q9Y6J0 2220 aa11.89□□□□□ -0.51
LSM2-212ENST00000477182 TLX3O43711 291 aaPredicted RBP11.89□□□□□ -0.51
LSM2-212ENST00000477182 PRPSAP2O60256 369 aa11.89□□□□□ -0.51
LSM2-212ENST00000477182 CDK4P11802 303 aa11.89□□□□□ -0.51
LSM2-212ENST00000477182 NDUFV2P19404 249 aa11.89□□□□□ -0.51
LSM2-212ENST00000477182 IL1R2P27930 398 aa11.89□□□□□ -0.51
LSM2-212ENST00000477182 PCK1P35558 622 aa11.89□□□□□ -0.51
LSM2-212ENST00000477182 SLC1A1P43005 524 aa11.89□□□□□ -0.51
LSM2-212ENST00000477182 CXCR3P49682 368 aa11.89□□□□□ -0.51
LSM2-212ENST00000477182 GNG11P61952 73 aa11.89□□□□□ -0.51
LSM2-212ENST00000477182 SLC7A9P82251 487 aa11.89□□□□□ -0.51
LSM2-212ENST00000477182 COG7P83436 770 aa11.89□□□□□ -0.51
LSM2-212ENST00000477182 RHDQ02161 417 aa11.89□□□□□ -0.51
LSM2-212ENST00000477182 SRSF1Q07955 248 aaKnown RBP eCLIP11.89□□□□□ -0.51
LSM2-212ENST00000477182 NNTQ13423 1086 aa11.89□□□□□ -0.51
LSM2-212ENST00000477182 EIF4EBP2Q13542 120 aaPredicted RBP11.89□□□□□ -0.51
LSM2-212ENST00000477182 RHBDF2Q6PJF5 856 aa11.89□□□□□ -0.51
LSM2-212ENST00000477182 PEX26Q7Z412 305 aa11.89□□□□□ -0.51
LSM2-212ENST00000477182 NT5DC3Q86UY8 548 aa11.89□□□□□ -0.51
LSM2-212ENST00000477182 C12orf40Q86WS4 652 aa11.89□□□□□ -0.51
LSM2-212ENST00000477182 ZCCHC9Q8N567 271 aaKnown RBP11.89□□□□□ -0.51
LSM2-212ENST00000477182 CCDC185Q8N715 623 aa11.89□□□□□ -0.51
LSM2-212ENST00000477182 CADM4Q8NFZ8 388 aa11.89□□□□□ -0.51
LSM2-212ENST00000477182 WBP2Q969T9 261 aa11.89□□□□□ -0.51
LSM2-212ENST00000477182 SLC39A13Q96H72 371 aa11.89□□□□□ -0.51
LSM2-212ENST00000477182 ZFRQ96KR1 1074 aaKnown RBP11.89□□□□□ -0.51
LSM2-212ENST00000477182 FCRL2Q96LA5 508 aaPredicted RBP11.89□□□□□ -0.51
LSM2-212ENST00000477182 NCAPGQ9BPX3 1015 aa11.89□□□□□ -0.51
LSM2-212ENST00000477182 ZWILCHQ9H900 591 aa11.89□□□□□ -0.51
LSM2-212ENST00000477182 TMPRSS4Q9NRS4 437 aa11.89□□□□□ -0.51
LSM2-212ENST00000477182 TBC1D14Q9P2M4 693 aa11.89□□□□□ -0.51
LSM2-212ENST00000477182 AMFRQ9UKV5 643 aa11.89□□□□□ -0.51
LSM2-212ENST00000477182 PACSIN2Q9UNF0 486 aaPredicted RBP11.89□□□□□ -0.51
LSM2-212ENST00000477182 DOCK4Q8N1I0 1966 aa11.88□□□□□ -0.51
LSM2-212ENST00000477182 A0A1W2PQF6 199 aa11.88□□□□□ -0.51
LSM2-212ENST00000477182 BCAT2O15382 392 aaPredicted RBP11.88□□□□□ -0.51
LSM2-212ENST00000477182 STC2O76061 302 aa11.88□□□□□ -0.51
LSM2-212ENST00000477182 MOCS2O96007 188 aaPredicted RBP11.88□□□□□ -0.51
LSM2-212ENST00000477182 IGLV3-27P01718 113 aa11.88□□□□□ -0.51
LSM2-212ENST00000477182 APOEP02649 317 aa11.88□□□□□ -0.51
LSM2-212ENST00000477182 JUPP14923 745 aa11.88□□□□□ -0.51
LSM2-212ENST00000477182 CD6P30203 668 aa11.88□□□□□ -0.51
LSM2-212ENST00000477182 CCR1P32246 355 aa11.88□□□□□ -0.51
LSM2-212ENST00000477182 IL12RB1P42701 662 aa11.88□□□□□ -0.51
LSM2-212ENST00000477182 GRK6P43250 576 aa11.88□□□□□ -0.51
LSM2-212ENST00000477182 MARCKSL1P49006 195 aa11.88□□□□□ -0.51
LSM2-212ENST00000477182 CXADRP78310 365 aa11.88□□□□□ -0.51
LSM2-212ENST00000477182 ZXDBP98169 803 aa11.88□□□□□ -0.51
LSM2-212ENST00000477182 SLC25A11Q02978 314 aaKnown RBP11.88□□□□□ -0.51
LSM2-212ENST00000477182 GAD2Q05329 585 aa11.88□□□□□ -0.51
LSM2-212ENST00000477182 HADHQ16836 314 aaKnown RBP11.88□□□□□ -0.51
LSM2-212ENST00000477182 INAVAQ3KP66 663 aa11.88□□□□□ -0.51
LSM2-212ENST00000477182 CCDC157Q569K6 752 aa11.88□□□□□ -0.51
LSM2-212ENST00000477182 TXNRD3NBQ6F5E7 133 aa11.88□□□□□ -0.51
LSM2-212ENST00000477182 DHRS13Q6UX07 377 aa11.88□□□□□ -0.51
LSM2-212ENST00000477182 CYP4V2Q6ZWL3 525 aaPredicted RBP11.88□□□□□ -0.51
LSM2-212ENST00000477182 DDX42Q86XP3 938 aaKnown RBP eCLIP11.88□□□□□ -0.51
LSM2-212ENST00000477182 PHTF2Q8N3S3 785 aa11.88□□□□□ -0.51
LSM2-212ENST00000477182 PLD4Q96BZ4 506 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms