RNA–Protein interactions for RNA: ENST00000476858.5

APTX-220, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,068 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-220ENST00000476858 FSCN3Q9NQT6 498 aa12.72□□□□□ -0.37
APTX-220ENST00000476858 ITM2CQ9NQX7 267 aa12.72□□□□□ -0.37
APTX-220ENST00000476858 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.72□□□□□ -0.37
APTX-220ENST00000476858 IP6K2Q9UHH9 426 aa12.72□□□□□ -0.37
APTX-220ENST00000476858 HS3ST2Q9Y278 367 aa12.72□□□□□ -0.37
APTX-220ENST00000476858 DUSP10Q9Y6W6 482 aa12.72□□□□□ -0.37
APTX-220ENST00000476858 NUMA1Q14980 2115 aa12.71□□□□□ -0.37
APTX-220ENST00000476858 THADAQ6YHU6 1953 aa12.71□□□□□ -0.37
APTX-220ENST00000476858 EDDM13A0A1B0GTR0 161 aa12.71□□□□□ -0.37
APTX-220ENST00000476858 WASH4PA8MWX3 477 aa12.71□□□□□ -0.37
APTX-220ENST00000476858 J3KR12 359 aa12.71□□□□□ -0.37
APTX-220ENST00000476858 GJB3O75712 270 aa12.71□□□□□ -0.37
APTX-220ENST00000476858 EPN2O95208 641 aa12.71□□□□□ -0.37
APTX-220ENST00000476858 LCA5LO95447 670 aa12.71□□□□□ -0.37
APTX-220ENST00000476858 ITPKAP23677 461 aa12.71□□□□□ -0.37
APTX-220ENST00000476858 MAOBP27338 520 aa12.71□□□□□ -0.37
APTX-220ENST00000476858 MAPKAPK2P49137 400 aa12.71□□□□□ -0.37
APTX-220ENST00000476858 DHPSP49366 369 aaPredicted RBP12.71□□□□□ -0.37
APTX-220ENST00000476858 PIGHQ14442 188 aaPredicted RBP12.71□□□□□ -0.37
APTX-220ENST00000476858 MESDQ14696 234 aa12.71□□□□□ -0.37
APTX-220ENST00000476858 TSR1Q2NL82 804 aaKnown RBP12.71□□□□□ -0.37
APTX-220ENST00000476858 IL31Q6EBC2 164 aa12.71□□□□□ -0.37
APTX-220ENST00000476858 LAIR1Q6GTX8 287 aa12.71□□□□□ -0.37
APTX-220ENST00000476858 C22orf39Q6P5X5 142 aa12.71□□□□□ -0.37
APTX-220ENST00000476858 POLNQ7Z5Q5 900 aa12.71□□□□□ -0.37
APTX-220ENST00000476858 KIAA2013Q8IYS2 634 aa12.71□□□□□ -0.37
APTX-220ENST00000476858 EFCAB3Q8N7B9 438 aa12.71□□□□□ -0.37
APTX-220ENST00000476858 ATP11CQ8NB49 1132 aa12.71□□□□□ -0.37
APTX-220ENST00000476858 KDM1BQ8NB78 822 aa12.71□□□□□ -0.37
APTX-220ENST00000476858 OR2A12Q8NGT7 310 aa12.71□□□□□ -0.37
APTX-220ENST00000476858 OR6K2Q8NGY2 324 aa12.71□□□□□ -0.37
APTX-220ENST00000476858 TSC1Q92574 1164 aa12.71□□□□□ -0.37
APTX-220ENST00000476858 PRCCQ92733 491 aaPredicted RBP12.71□□□□□ -0.37
APTX-220ENST00000476858 NSMCE3Q96MG7 304 aa12.71□□□□□ -0.37
APTX-220ENST00000476858 PANX2Q96RD6 677 aa12.71□□□□□ -0.37
APTX-220ENST00000476858 EPAS1Q99814 870 aa12.71□□□□□ -0.37
APTX-220ENST00000476858 GPR174Q9BXC1 333 aa12.71□□□□□ -0.37
APTX-220ENST00000476858 SEMA4AQ9H3S1 761 aa12.71□□□□□ -0.37
APTX-220ENST00000476858 LRRC19Q9H756 370 aa12.71□□□□□ -0.37
APTX-220ENST00000476858 WSB2Q9NYS7 404 aaPredicted RBP12.71□□□□□ -0.37
APTX-220ENST00000476858 NCDNQ9UBB6 729 aa12.71□□□□□ -0.37
APTX-220ENST00000476858 SUN2Q9UH99 717 aa12.71□□□□□ -0.37
APTX-220ENST00000476858 SLC25A13Q9UJS0 675 aa12.71□□□□□ -0.37
APTX-220ENST00000476858 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.71□□□□□ -0.37
APTX-220ENST00000476858 EP300Q09472 2414 aaPredicted RBP12.71□□□□□ -0.38
APTX-220ENST00000476858 A0A1W2PP55 124 aa12.7□□□□□ -0.38
APTX-220ENST00000476858 MYO1FO00160 1098 aa12.7□□□□□ -0.38
APTX-220ENST00000476858 GDF9O60383 454 aa12.7□□□□□ -0.38
APTX-220ENST00000476858 RAMP2O60895 175 aa12.7□□□□□ -0.38
APTX-220ENST00000476858 MTA2O94776 668 aa12.7□□□□□ -0.38
APTX-220ENST00000476858 CDC25BP30305 580 aa12.7□□□□□ -0.38
APTX-220ENST00000476858 DRD3P35462 400 aa12.7□□□□□ -0.38
APTX-220ENST00000476858 SSR1P43307 286 aaKnown RBP12.7□□□□□ -0.38
APTX-220ENST00000476858 MAGEA1P43355 309 aa12.7□□□□□ -0.38
APTX-220ENST00000476858 SERPINH1P50454 418 aaKnown RBP12.7□□□□□ -0.38
APTX-220ENST00000476858 AIF1P55008 147 aa12.7□□□□□ -0.38
APTX-220ENST00000476858 RPL6Q02878 288 aaKnown RBP12.7□□□□□ -0.38
APTX-220ENST00000476858 SULT2A1Q06520 285 aa12.7□□□□□ -0.38
APTX-220ENST00000476858 POLD3Q15054 466 aaPredicted RBP12.7□□□□□ -0.38
APTX-220ENST00000476858 CST6Q15828 149 aa12.7□□□□□ -0.38
APTX-220ENST00000476858 DPYSL2Q16555 572 aa12.7□□□□□ -0.38
APTX-220ENST00000476858 ATXN7L2Q5T6C5 722 aaPredicted RBP12.7□□□□□ -0.38
APTX-220ENST00000476858 AFMIDQ63HM1 303 aa12.7□□□□□ -0.38
APTX-220ENST00000476858 ZNF776Q68DI1 518 aaPredicted RBP12.7□□□□□ -0.38
APTX-220ENST00000476858 UMODL1-AS1Q8N2C9 162 aa12.7□□□□□ -0.38
APTX-220ENST00000476858 RAPGEF5Q92565 580 aa12.7□□□□□ -0.38
APTX-220ENST00000476858 RUBCNQ92622 972 aa12.7□□□□□ -0.38
APTX-220ENST00000476858 ARRDC3Q96B67 414 aa12.7□□□□□ -0.38
APTX-220ENST00000476858 CSPG4P5Q96PW8 444 aa12.7□□□□□ -0.38
APTX-220ENST00000476858 HINFPQ9BQA5 517 aa12.7□□□□□ -0.38
APTX-220ENST00000476858 DESI2Q9BSY9 194 aa12.7□□□□□ -0.38
APTX-220ENST00000476858 C2orf49Q9BVC5 232 aaPredicted RBP12.7□□□□□ -0.38
APTX-220ENST00000476858 TM6SF2Q9BZW4 377 aa12.7□□□□□ -0.38
APTX-220ENST00000476858 LACRTQ9GZZ8 138 aa12.7□□□□□ -0.38
APTX-220ENST00000476858 NEUROG2Q9H2A3 272 aa12.7□□□□□ -0.38
APTX-220ENST00000476858 PABPC3Q9H361 631 aaKnown RBP12.7□□□□□ -0.38
APTX-220ENST00000476858 C6orf106Q9H6K1 298 aaPredicted RBP12.7□□□□□ -0.38
APTX-220ENST00000476858 UVRAGQ9P2Y5 699 aa12.7□□□□□ -0.38
APTX-220ENST00000476858 TRIM10Q9UDY6 481 aa12.7□□□□□ -0.38
APTX-220ENST00000476858 PCDHA13Q9Y5I0 950 aa12.7□□□□□ -0.38
APTX-220ENST00000476858 GVINP1Q7Z2Y8 2422 aa12.7□□□□□ -0.38
APTX-220ENST00000476858 BCLAF3A2AJT9 711 aaKnown RBP12.69□□□□□ -0.38
APTX-220ENST00000476858 TARSL2A2RTX5 802 aaKnown RBP12.69□□□□□ -0.38
APTX-220ENST00000476858 INSIG1O15503 277 aa12.69□□□□□ -0.38
APTX-220ENST00000476858 KDELR3O43731 214 aa12.69□□□□□ -0.38
APTX-220ENST00000476858 NDUFA10O95299 355 aa12.69□□□□□ -0.38
APTX-220ENST00000476858 MAP3K6O95382 1288 aa12.69□□□□□ -0.38
APTX-220ENST00000476858 IGLV3-19P01714 112 aa12.69□□□□□ -0.38
APTX-220ENST00000476858 RETP07949 1114 aa12.69□□□□□ -0.38
APTX-220ENST00000476858 CD6P30203 668 aa12.69□□□□□ -0.38
APTX-220ENST00000476858 SLC8A1P32418 973 aa12.69□□□□□ -0.38
APTX-220ENST00000476858 RGRP47804 291 aa12.69□□□□□ -0.38
APTX-220ENST00000476858 MARCKSL1P49006 195 aa12.69□□□□□ -0.38
APTX-220ENST00000476858 PAPOLAP51003 745 aaKnown RBP12.69□□□□□ -0.38
APTX-220ENST00000476858 OXCT1P55809 520 aa12.69□□□□□ -0.38
APTX-220ENST00000476858 KRT83P78385 493 aa12.69□□□□□ -0.38
APTX-220ENST00000476858 CREB5Q02930 508 aa12.69□□□□□ -0.38
APTX-220ENST00000476858 SERINC3Q13530 473 aa12.69□□□□□ -0.38
APTX-220ENST00000476858 DPYSL3Q14195 570 aa12.69□□□□□ -0.38
APTX-220ENST00000476858 CYTH1Q15438 398 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms