RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 HEMK1Q9Y5R4 338 aaPredicted RBP11.68□□□□□ -0.54
BRCA1-213ENST00000476777 CENPEQ02224 2701 aa11.67□□□□□ -0.54
BRCA1-213ENST00000476777 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.67□□□□□ -0.54
BRCA1-213ENST00000476777 A0A1B0GVL5 298 aa11.67□□□□□ -0.54
BRCA1-213ENST00000476777 CPED1A4D0V7 1026 aa11.67□□□□□ -0.54
BRCA1-213ENST00000476777 F5H5T6 163 aa11.67□□□□□ -0.54
BRCA1-213ENST00000476777 RNF225M0QZC1 329 aaPredicted RBP11.67□□□□□ -0.54
BRCA1-213ENST00000476777 CENPBP07199 599 aaPredicted RBP11.67□□□□□ -0.54
BRCA1-213ENST00000476777 EPB41P11171 864 aaKnown RBP11.67□□□□□ -0.54
BRCA1-213ENST00000476777 PFKFB1P16118 471 aa11.67□□□□□ -0.54
BRCA1-213ENST00000476777 ZNF18P17022 549 aa11.67□□□□□ -0.54
BRCA1-213ENST00000476777 RPL34P49207 117 aaKnown RBP11.67□□□□□ -0.54
BRCA1-213ENST00000476777 OXCT1P55809 520 aa11.67□□□□□ -0.54
BRCA1-213ENST00000476777 HNRNPKP61978 463 aaKnown RBP eCLIP11.67□□□□□ -0.54
BRCA1-213ENST00000476777 NUCB2P80303 420 aa11.67□□□□□ -0.54
BRCA1-213ENST00000476777 LRMPQ12912 555 aa11.67□□□□□ -0.54
BRCA1-213ENST00000476777 ZNF177Q13360 481 aaPredicted RBP11.67□□□□□ -0.54
BRCA1-213ENST00000476777 FZD2Q14332 565 aa11.67□□□□□ -0.54
BRCA1-213ENST00000476777 ZSCAN23Q3MJ62 389 aa11.67□□□□□ -0.54
BRCA1-213ENST00000476777 ZCCHC8Q6NZY4 707 aaKnown RBP11.67□□□□□ -0.54
BRCA1-213ENST00000476777 BEND5Q7L4P6 421 aa11.67□□□□□ -0.54
BRCA1-213ENST00000476777 EFL1Q7Z2Z2 1120 aaKnown RBP11.67□□□□□ -0.54
BRCA1-213ENST00000476777 ARL14Q8N4G2 192 aa11.67□□□□□ -0.54
BRCA1-213ENST00000476777 ZNF548Q8NEK5 533 aaPredicted RBP11.67□□□□□ -0.54
BRCA1-213ENST00000476777 OR52K2Q8NGK3 314 aa11.67□□□□□ -0.54
BRCA1-213ENST00000476777 ARRDC3Q96B67 414 aa11.67□□□□□ -0.54
BRCA1-213ENST00000476777 FAM149B1Q96BN6 582 aa11.67□□□□□ -0.54
BRCA1-213ENST00000476777 CCNL2Q96S94 520 aaPredicted RBP11.67□□□□□ -0.54
BRCA1-213ENST00000476777 FEM1AQ9BSK4 669 aa11.67□□□□□ -0.54
BRCA1-213ENST00000476777 STARD5Q9NSY2 213 aa11.67□□□□□ -0.54
BRCA1-213ENST00000476777 USP25Q9UHP3 1055 aa11.67□□□□□ -0.54
BRCA1-213ENST00000476777 SLC25A13Q9UJS0 675 aa11.67□□□□□ -0.54
BRCA1-213ENST00000476777 ZFR2Q9UPR6 939 aaKnown RBP11.67□□□□□ -0.54
BRCA1-213ENST00000476777 EME2A4GXA9 379 aaPredicted RBP11.66□□□□□ -0.54
BRCA1-213ENST00000476777 TCAF2A6NFQ2 919 aa11.66□□□□□ -0.54
BRCA1-213ENST00000476777 A6NNZ2 444 aa11.66□□□□□ -0.54
BRCA1-213ENST00000476777 KCNU1A8MYU2 1149 aa11.66□□□□□ -0.54
BRCA1-213ENST00000476777 RNF103O00237 685 aa11.66□□□□□ -0.54
BRCA1-213ENST00000476777 CASC3O15234 703 aaKnown RBP11.66□□□□□ -0.54
BRCA1-213ENST00000476777 BNIP3LO60238 219 aa11.66□□□□□ -0.54
BRCA1-213ENST00000476777 TCEA3O75764 348 aa11.66□□□□□ -0.54
BRCA1-213ENST00000476777 TNFSF15O95150 251 aa11.66□□□□□ -0.54
BRCA1-213ENST00000476777 CALCAP01258 141 aa11.66□□□□□ -0.54
BRCA1-213ENST00000476777 IGLV3-25P01717 112 aa11.66□□□□□ -0.54
BRCA1-213ENST00000476777 CSF2P04141 144 aa11.66□□□□□ -0.54
BRCA1-213ENST00000476777 NME1P15531 152 aaKnown RBP11.66□□□□□ -0.54
BRCA1-213ENST00000476777 TBXAS1P24557 533 aaPredicted RBP11.66□□□□□ -0.54
BRCA1-213ENST00000476777 BRD2P25440 801 aaKnown RBP11.66□□□□□ -0.54
BRCA1-213ENST00000476777 MLLT3P42568 568 aaPredicted RBP11.66□□□□□ -0.54
BRCA1-213ENST00000476777 DPYDQ12882 1025 aa11.66□□□□□ -0.54
BRCA1-213ENST00000476777 EIF4EBP2Q13542 120 aaPredicted RBP11.66□□□□□ -0.54
BRCA1-213ENST00000476777 TMEM259Q4ZIN3 620 aa11.66□□□□□ -0.54
BRCA1-213ENST00000476777 DCAF17Q5H9S7 520 aaPredicted RBP11.66□□□□□ -0.54
BRCA1-213ENST00000476777 C6orf132Q5T0Z8 1188 aa11.66□□□□□ -0.54
BRCA1-213ENST00000476777 TTC39BQ5VTQ0 682 aaPredicted RBP11.66□□□□□ -0.54
BRCA1-213ENST00000476777 SEL1L3Q68CR1 1132 aa11.66□□□□□ -0.54
BRCA1-213ENST00000476777 OR6B2Q6IFH4 312 aa11.66□□□□□ -0.54
BRCA1-213ENST00000476777 FBXL22Q6P050 247 aa11.66□□□□□ -0.54
BRCA1-213ENST00000476777 FOXR1Q6PIV2 292 aa11.66□□□□□ -0.54
BRCA1-213ENST00000476777 PTAR1Q7Z6K3 402 aaPredicted RBP11.66□□□□□ -0.54
BRCA1-213ENST00000476777 DCP2Q8IU60 420 aaKnown RBP11.66□□□□□ -0.54
BRCA1-213ENST00000476777 SH2D3CQ8N5H7 860 aa11.66□□□□□ -0.54
BRCA1-213ENST00000476777 TPCN2Q8NHX9 752 aa11.66□□□□□ -0.54
BRCA1-213ENST00000476777 WDR36Q8NI36 951 aaKnown RBP11.66□□□□□ -0.54
BRCA1-213ENST00000476777 FAM174AQ8TBP5 190 aa11.66□□□□□ -0.54
BRCA1-213ENST00000476777 CCDC47Q96A33 483 aaKnown RBP11.66□□□□□ -0.54
BRCA1-213ENST00000476777 BMFQ96LC9 184 aa11.66□□□□□ -0.54
BRCA1-213ENST00000476777 PPP1R9BQ96SB3 815 aa11.66□□□□□ -0.54
BRCA1-213ENST00000476777 NCKIPSDQ9NZQ3 722 aa11.66□□□□□ -0.54
BRCA1-213ENST00000476777 KLF15Q9UIH9 416 aa11.66□□□□□ -0.54
BRCA1-213ENST00000476777 RCOR1Q9UKL0 485 aa11.66□□□□□ -0.54
BRCA1-213ENST00000476777 ATXN7L1Q9ULK2 861 aaPredicted RBP11.66□□□□□ -0.54
BRCA1-213ENST00000476777 HPSEQ9Y251 543 aa11.66□□□□□ -0.54
BRCA1-213ENST00000476777 OR51B4Q9Y5P0 310 aa11.66□□□□□ -0.54
BRCA1-213ENST00000476777 HS3ST3A1Q9Y663 406 aa11.66□□□□□ -0.54
BRCA1-213ENST00000476777 CSNK1G3Q9Y6M4 447 aa11.66□□□□□ -0.54
BRCA1-213ENST00000476777 NBPF19A0A087WUL8 3843 aa11.66□□□□□ -0.54
BRCA1-213ENST00000476777 SPTY2D1-AS1A0A0U1RR47 76 aa11.65□□□□□ -0.54
BRCA1-213ENST00000476777 POM121BA6NF01 834 aa11.65□□□□□ -0.54
BRCA1-213ENST00000476777 KPNA3O00505 521 aaPredicted RBP11.65□□□□□ -0.54
BRCA1-213ENST00000476777 RIOK3O14730 519 aaKnown RBP11.65□□□□□ -0.54
BRCA1-213ENST00000476777 CETN3O15182 167 aa11.65□□□□□ -0.54
BRCA1-213ENST00000476777 SART1O43290 800 aaKnown RBP11.65□□□□□ -0.54
BRCA1-213ENST00000476777 PCDH8O95206 1070 aa11.65□□□□□ -0.54
BRCA1-213ENST00000476777 TRUB2O95900 331 aaKnown RBP11.65□□□□□ -0.54
BRCA1-213ENST00000476777 MT-CO1P00395 513 aa11.65□□□□□ -0.54
BRCA1-213ENST00000476777 ITGA2BP08514 1039 aa11.65□□□□□ -0.54
BRCA1-213ENST00000476777 ITGB6P18564 788 aa11.65□□□□□ -0.54
BRCA1-213ENST00000476777 CMA1P23946 247 aa11.65□□□□□ -0.54
BRCA1-213ENST00000476777 CHRNA3P32297 505 aa11.65□□□□□ -0.54
BRCA1-213ENST00000476777 GPD2P43304 727 aa11.65□□□□□ -0.54
BRCA1-213ENST00000476777 IRAK1P51617 712 aa11.65□□□□□ -0.54
BRCA1-213ENST00000476777 PDX1P52945 283 aa11.65□□□□□ -0.54
BRCA1-213ENST00000476777 PITX1P78337 314 aaPredicted RBP11.65□□□□□ -0.54
BRCA1-213ENST00000476777 NFKB2Q00653 900 aa11.65□□□□□ -0.54
BRCA1-213ENST00000476777 CENPCQ03188 943 aa11.65□□□□□ -0.54
BRCA1-213ENST00000476777 CCDC15Q0P6D6 951 aa11.65□□□□□ -0.54
BRCA1-213ENST00000476777 FGL2Q14314 439 aa11.65□□□□□ -0.54
BRCA1-213ENST00000476777 STILQ15468 1287 aa11.65□□□□□ -0.54
BRCA1-213ENST00000476777 DEFB133Q30KQ1 61 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms