RNA–Protein interactions for RNA: ENST00000476215.5

PTCD3-211, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-211ENST00000476215 TTLL5Q6EMB2 1281 aa5.35□□□□□ -1.55
PTCD3-211ENST00000476215 HMBOX1Q6NT76 420 aa5.35□□□□□ -1.55
PTCD3-211ENST00000476215 AAGABQ6PD74 315 aa5.35□□□□□ -1.55
PTCD3-211ENST00000476215 GJB7Q6PEY0 223 aa5.35□□□□□ -1.55
PTCD3-211ENST00000476215 GHDCQ8N2G8 530 aa5.35□□□□□ -1.55
PTCD3-211ENST00000476215 LSM14AQ8ND56 463 aaKnown RBP5.35□□□□□ -1.55
PTCD3-211ENST00000476215 IL17REQ8NFR9 667 aa5.35□□□□□ -1.55
PTCD3-211ENST00000476215 DENND1AQ8TEH3 1009 aa5.35□□□□□ -1.55
PTCD3-211ENST00000476215 PIGOQ8TEQ8 1089 aa5.35□□□□□ -1.55
PTCD3-211ENST00000476215 COQ8BQ96D53 544 aa5.35□□□□□ -1.55
PTCD3-211ENST00000476215 FRG2BQ96QU4 278 aa5.35□□□□□ -1.55
PTCD3-211ENST00000476215 PHF7Q9BWX1 381 aaPredicted RBP5.35□□□□□ -1.55
PTCD3-211ENST00000476215 ACTR5Q9H9F9 607 aaPredicted RBP5.35□□□□□ -1.55
PTCD3-211ENST00000476215 MSRB1Q9NZV6 116 aa5.35□□□□□ -1.55
PTCD3-211ENST00000476215 CNOT7Q9UIV1 285 aaKnown RBP5.35□□□□□ -1.55
PTCD3-211ENST00000476215 ICKQ9UPZ9 632 aa5.35□□□□□ -1.55
PTCD3-211ENST00000476215 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.35□□□□□ -1.55
PTCD3-211ENST00000476215 A0A1W2PPC1 479 aa5.34□□□□□ -1.55
PTCD3-211ENST00000476215 OR6C68A6NDL8 312 aa5.34□□□□□ -1.55
PTCD3-211ENST00000476215 GUCY1B2O75343 617 aa5.34□□□□□ -1.55
PTCD3-211ENST00000476215 DDAH2O95865 285 aa5.34□□□□□ -1.55
PTCD3-211ENST00000476215 FGBP02675 491 aa5.34□□□□□ -1.55
PTCD3-211ENST00000476215 GAD2Q05329 585 aa5.34□□□□□ -1.55
PTCD3-211ENST00000476215 RBMS2Q15434 407 aaKnown RBP5.34□□□□□ -1.55
PTCD3-211ENST00000476215 ETFDHQ16134 617 aa5.34□□□□□ -1.55
PTCD3-211ENST00000476215 PIK3CD-AS1Q5SR53 167 aa5.34□□□□□ -1.55
PTCD3-211ENST00000476215 JAKMIP3Q5VZ66 844 aa5.34□□□□□ -1.55
PTCD3-211ENST00000476215 NAPEPLDQ6IQ20 393 aa5.34□□□□□ -1.55
PTCD3-211ENST00000476215 ADGRG6Q86SQ4 1221 aa5.34□□□□□ -1.55
PTCD3-211ENST00000476215 SETD9Q8NE22 299 aa5.34□□□□□ -1.55
PTCD3-211ENST00000476215 CMASQ8NFW8 434 aaPredicted RBP5.34□□□□□ -1.55
PTCD3-211ENST00000476215 C16orf52Q8NHV5 167 aa5.34□□□□□ -1.55
PTCD3-211ENST00000476215 RFWD2Q8NHY2 731 aa5.34□□□□□ -1.55
PTCD3-211ENST00000476215 FAR1Q8WVX9 515 aa5.34□□□□□ -1.55
PTCD3-211ENST00000476215 RUFY2Q8WXA3 655 aa5.34□□□□□ -1.55
PTCD3-211ENST00000476215 CNOT9Q92600 299 aaKnown RBP5.34□□□□□ -1.55
PTCD3-211ENST00000476215 WDR83Q9BRX9 315 aaKnown RBP5.34□□□□□ -1.55
PTCD3-211ENST00000476215 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.34□□□□□ -1.55
PTCD3-211ENST00000476215 SPAG4Q9NPE6 437 aa5.34□□□□□ -1.55
PTCD3-211ENST00000476215 TBX20Q9UMR3 447 aa5.34□□□□□ -1.55
PTCD3-211ENST00000476215 COG5Q9UP83 839 aa5.34□□□□□ -1.55
PTCD3-211ENST00000476215 A0A0A0MQY5 61 aa5.33□□□□□ -1.56
PTCD3-211ENST00000476215 TARSL2A2RTX5 802 aaKnown RBP5.33□□□□□ -1.56
PTCD3-211ENST00000476215 A6NLC8 198 aa5.33□□□□□ -1.56
PTCD3-211ENST00000476215 A6NNC1 897 aa5.33□□□□□ -1.56
PTCD3-211ENST00000476215 TLX3O43711 291 aaPredicted RBP5.33□□□□□ -1.56
PTCD3-211ENST00000476215 TULP3O75386 442 aa5.33□□□□□ -1.56
PTCD3-211ENST00000476215 TOP3BO95985 862 aaKnown RBP5.33□□□□□ -1.56
PTCD3-211ENST00000476215 PTGER1P34995 402 aa5.33□□□□□ -1.56
PTCD3-211ENST00000476215 SLC16A2P36021 539 aa5.33□□□□□ -1.56
PTCD3-211ENST00000476215 RABEP1Q15276 862 aa5.33□□□□□ -1.56
PTCD3-211ENST00000476215 GPR68Q15743 365 aa5.33□□□□□ -1.56
PTCD3-211ENST00000476215 SLC18A3Q16572 532 aa5.33□□□□□ -1.56
PTCD3-211ENST00000476215 FBXO43Q4G163 708 aa5.33□□□□□ -1.56
PTCD3-211ENST00000476215 PXDC1Q5TGL8 231 aa5.33□□□□□ -1.56
PTCD3-211ENST00000476215 SLC22A25Q6T423 547 aa5.33□□□□□ -1.56
PTCD3-211ENST00000476215 KDELC2Q7Z4H8 507 aa5.33□□□□□ -1.56
PTCD3-211ENST00000476215 SLC25A41Q8N5S1 370 aa5.33□□□□□ -1.56
PTCD3-211ENST00000476215 DPP10Q8N608 796 aa5.33□□□□□ -1.56
PTCD3-211ENST00000476215 C9orf106Q8NAJ2 232 aa5.33□□□□□ -1.56
PTCD3-211ENST00000476215 NAXEQ8NCW5 288 aa5.33□□□□□ -1.56
PTCD3-211ENST00000476215 CENPIQ92674 756 aaPredicted RBP5.33□□□□□ -1.56
PTCD3-211ENST00000476215 ZFYVE19Q96K21 471 aa5.33□□□□□ -1.56
PTCD3-211ENST00000476215 TEFMQ96QE5 360 aaKnown RBP5.33□□□□□ -1.56
PTCD3-211ENST00000476215 SEC62Q99442 399 aaKnown RBP5.33□□□□□ -1.56
PTCD3-211ENST00000476215 EYA3Q99504 573 aa5.33□□□□□ -1.56
PTCD3-211ENST00000476215 NAP1L4Q99733 375 aaKnown RBP5.33□□□□□ -1.56
PTCD3-211ENST00000476215 CLSTN3Q9BQT9 956 aa5.33□□□□□ -1.56
PTCD3-211ENST00000476215 TMEM79Q9BSE2 394 aa5.33□□□□□ -1.56
PTCD3-211ENST00000476215 TRMOQ9BU70 441 aa5.33□□□□□ -1.56
PTCD3-211ENST00000476215 SPRTNQ9H040 489 aaPredicted RBP5.33□□□□□ -1.56
PTCD3-211ENST00000476215 LMAN2LQ9H0V9 348 aa5.33□□□□□ -1.56
PTCD3-211ENST00000476215 UBN1Q9NPG3 1134 aa5.33□□□□□ -1.56
PTCD3-211ENST00000476215 HEY2Q9UBP5 337 aa5.33□□□□□ -1.56
PTCD3-211ENST00000476215 CDH22Q9UJ99 828 aa5.33□□□□□ -1.56
PTCD3-211ENST00000476215 ARHGAP26Q9UNA1 814 aa5.33□□□□□ -1.56
PTCD3-211ENST00000476215 OSGIN2Q9Y236 505 aa5.33□□□□□ -1.56
PTCD3-211ENST00000476215 TRBV5-7A0A0A0MS05 114 aa5.32□□□□□ -1.56
PTCD3-211ENST00000476215 A0A0G2JK05 382 aa5.32□□□□□ -1.56
PTCD3-211ENST00000476215 PER2O15055 1255 aa5.32□□□□□ -1.56
PTCD3-211ENST00000476215 TMCC1O94876 653 aa5.32□□□□□ -1.56
PTCD3-211ENST00000476215 IL1AP01583 271 aa5.32□□□□□ -1.56
PTCD3-211ENST00000476215 CHRM4P08173 479 aa5.32□□□□□ -1.56
PTCD3-211ENST00000476215 CHRNB1P11230 501 aa5.32□□□□□ -1.56
PTCD3-211ENST00000476215 PRF1P14222 555 aa5.32□□□□□ -1.56
PTCD3-211ENST00000476215 LIFRP42702 1097 aa5.32□□□□□ -1.56
PTCD3-211ENST00000476215 GPD2P43304 727 aa5.32□□□□□ -1.56
PTCD3-211ENST00000476215 GALNT2Q10471 571 aa5.32□□□□□ -1.56
PTCD3-211ENST00000476215 INPP5JQ15735 1006 aaPredicted RBP5.32□□□□□ -1.56
PTCD3-211ENST00000476215 UBAP2Q5T6F2 1119 aaKnown RBP5.32□□□□□ -1.56
PTCD3-211ENST00000476215 INTS11Q5TA45 600 aaKnown RBP5.32□□□□□ -1.56
PTCD3-211ENST00000476215 WDR5BQ86VZ2 330 aa5.32□□□□□ -1.56
PTCD3-211ENST00000476215 FAM185AQ8N0U4 392 aa5.32□□□□□ -1.56
PTCD3-211ENST00000476215 DNAAF1Q8NEP3 725 aa5.32□□□□□ -1.56
PTCD3-211ENST00000476215 RAB40AQ8WXH6 277 aa5.32□□□□□ -1.56
PTCD3-211ENST00000476215 ST8SIA4Q92187 359 aa5.32□□□□□ -1.56
PTCD3-211ENST00000476215 HSPH1Q92598 858 aa5.32□□□□□ -1.56
PTCD3-211ENST00000476215 ZBTB10Q96DT7 871 aa5.32□□□□□ -1.56
PTCD3-211ENST00000476215 INTS2Q9H0H0 1204 aaKnown RBP5.32□□□□□ -1.56
PTCD3-211ENST00000476215 SLC32A1Q9H598 525 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms