RNA–Protein interactions for RNA: ENST00000475693.1

ATG4B-217, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 2,237 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-217ENST00000475693 C5orf60A6NFR6 353 aa18.46■□□□□ 0.55
ATG4B-217ENST00000475693 HEPACAM2A8MVW5 462 aa18.46■□□□□ 0.55
ATG4B-217ENST00000475693 NCAM2O15394 837 aa18.46■□□□□ 0.55
ATG4B-217ENST00000475693 ARSAP15289 507 aa18.46■□□□□ 0.55
ATG4B-217ENST00000475693 FCARP24071 287 aa18.46■□□□□ 0.55
ATG4B-217ENST00000475693 CD70P32970 193 aa18.46■□□□□ 0.55
ATG4B-217ENST00000475693 CSKP41240 450 aa18.46■□□□□ 0.55
ATG4B-217ENST00000475693 MAPKAPK2P49137 400 aa18.46■□□□□ 0.55
ATG4B-217ENST00000475693 DRG2P55039 364 aaKnown RBP18.46■□□□□ 0.55
ATG4B-217ENST00000475693 CALCOCO2Q13137 446 aa18.46■□□□□ 0.55
ATG4B-217ENST00000475693 GRM2Q14416 872 aa18.46■□□□□ 0.55
ATG4B-217ENST00000475693 RNASEH2BQ5TBB1 312 aaKnown RBP18.46■□□□□ 0.55
ATG4B-217ENST00000475693 ARHGEF18Q6ZSZ5 1173 aa18.46■□□□□ 0.55
ATG4B-217ENST00000475693 MFN1Q8IWA4 741 aa18.46■□□□□ 0.55
ATG4B-217ENST00000475693 CELF5Q8N6W0 485 aaKnown RBP18.46■□□□□ 0.55
ATG4B-217ENST00000475693 HJURPQ8NCD3 748 aaPredicted RBP18.46■□□□□ 0.55
ATG4B-217ENST00000475693 SPATA13Q96N96 652 aa18.46■□□□□ 0.55
ATG4B-217ENST00000475693 KXD1Q9BQD3 176 aa18.46■□□□□ 0.55
ATG4B-217ENST00000475693 EBF3Q9H4W6 596 aa18.46■□□□□ 0.55
ATG4B-217ENST00000475693 CFAP69A5D8W1 941 aa18.45■□□□□ 0.54
ATG4B-217ENST00000475693 CBX4O00257 560 aa18.45■□□□□ 0.54
ATG4B-217ENST00000475693 AVILO75366 819 aa18.45■□□□□ 0.54
ATG4B-217ENST00000475693 LUC7L3O95232 432 aaKnown RBP18.45■□□□□ 0.54
ATG4B-217ENST00000475693 LATS1O95835 1130 aa18.45■□□□□ 0.54
ATG4B-217ENST00000475693 HOXB8P17481 243 aaPredicted RBP18.45■□□□□ 0.54
ATG4B-217ENST00000475693 CCNCP24863 283 aa18.45■□□□□ 0.54
ATG4B-217ENST00000475693 CUL1Q13616 776 aa18.45■□□□□ 0.54
ATG4B-217ENST00000475693 CDH18Q13634 790 aa18.45■□□□□ 0.54
ATG4B-217ENST00000475693 HIBCHQ6NVY1 386 aaPredicted RBP18.45■□□□□ 0.54
ATG4B-217ENST00000475693 PARM1Q6UWI2 310 aa18.45■□□□□ 0.54
ATG4B-217ENST00000475693 RNF135Q8IUD6 432 aa18.45■□□□□ 0.54
ATG4B-217ENST00000475693 FGF14Q92915 247 aa18.45■□□□□ 0.54
ATG4B-217ENST00000475693 BBS2Q9BXC9 721 aa18.45■□□□□ 0.54
ATG4B-217ENST00000475693 CDH7Q9ULB5 785 aa18.45■□□□□ 0.54
ATG4B-217ENST00000475693 TBC1D30Q9Y2I9 924 aa18.45■□□□□ 0.54
ATG4B-217ENST00000475693 ARHGAP42A6NI28 874 aa18.45■□□□□ 0.54
ATG4B-217ENST00000475693 APRTP07741 180 aa18.45■□□□□ 0.54
ATG4B-217ENST00000475693 ITIH2P19823 946 aa18.45■□□□□ 0.54
ATG4B-217ENST00000475693 MTA1Q13330 715 aa18.45■□□□□ 0.54
ATG4B-217ENST00000475693 TEX44Q53QW1 395 aa18.45■□□□□ 0.54
ATG4B-217ENST00000475693 CPXM2Q8N436 756 aa18.45■□□□□ 0.54
ATG4B-217ENST00000475693 SPATA22Q8NHS9 363 aa18.45■□□□□ 0.54
ATG4B-217ENST00000475693 IRF7Q92985 503 aa18.45■□□□□ 0.54
ATG4B-217ENST00000475693 TSGA13Q96PP4 275 aa18.45■□□□□ 0.54
ATG4B-217ENST00000475693 SP110Q9HB58 689 aa18.45■□□□□ 0.54
ATG4B-217ENST00000475693 ATP13A1Q9HD20 1204 aa18.45■□□□□ 0.54
ATG4B-217ENST00000475693 SPHK2Q9NRA0 654 aa18.45■□□□□ 0.54
ATG4B-217ENST00000475693 RBM22Q9NW64 420 aaKnown RBP eCLIP18.45■□□□□ 0.542e-6■□□□□ 10.6
ATG4B-217ENST00000475693 DUS2Q9NX74 493 aaKnown RBP18.45■□□□□ 0.54
ATG4B-217ENST00000475693 WHRNQ9P202 907 aa18.45■□□□□ 0.54
ATG4B-217ENST00000475693 ZNF510Q9Y2H8 683 aa18.45■□□□□ 0.54
ATG4B-217ENST00000475693 FARP1Q9Y4F1 1045 aaPredicted RBP18.45■□□□□ 0.54
ATG4B-217ENST00000475693 RAD54BQ9Y620 910 aa18.45■□□□□ 0.54
ATG4B-217ENST00000475693 A0A087WUV0 522 aaPredicted RBP18.44■□□□□ 0.54
ATG4B-217ENST00000475693 MATN3O15232 486 aa18.44■□□□□ 0.54
ATG4B-217ENST00000475693 HLA-DQB2P05538 268 aa18.44■□□□□ 0.54
ATG4B-217ENST00000475693 NFKB1P19838 968 aa18.44■□□□□ 0.54
ATG4B-217ENST00000475693 SKOR1P84550 965 aa18.44■□□□□ 0.54
ATG4B-217ENST00000475693 MESP2Q0VG99 397 aa18.44■□□□□ 0.54
ATG4B-217ENST00000475693 TTC31Q49AM3 519 aaPredicted RBP18.44■□□□□ 0.54
ATG4B-217ENST00000475693 MPPE1Q53F39 396 aa18.44■□□□□ 0.54
ATG4B-217ENST00000475693 C6orf118Q5T5N4 469 aa18.44■□□□□ 0.54
ATG4B-217ENST00000475693 ACBD5Q5T8D3 534 aaPredicted RBP18.44■□□□□ 0.54
ATG4B-217ENST00000475693 NAIF1Q69YI7 327 aaPredicted RBP18.44■□□□□ 0.54
ATG4B-217ENST00000475693 CHST9Q7L1S5 443 aa18.44■□□□□ 0.54
ATG4B-217ENST00000475693 TSEN2Q8NCE0 465 aaKnown RBP18.44■□□□□ 0.54
ATG4B-217ENST00000475693 FMO2Q99518 471 aa18.44■□□□□ 0.54
ATG4B-217ENST00000475693 FEM1AQ9BSK4 669 aa18.44■□□□□ 0.54
ATG4B-217ENST00000475693 PAK5Q9P286 719 aa18.44■□□□□ 0.54
ATG4B-217ENST00000475693 MUSKO15146 869 aa18.43■□□□□ 0.54
ATG4B-217ENST00000475693 USP12O75317 370 aa18.43■□□□□ 0.54
ATG4B-217ENST00000475693 MT-CO1P00395 513 aa18.43■□□□□ 0.54
ATG4B-217ENST00000475693 TYRP14679 529 aa18.43■□□□□ 0.54
ATG4B-217ENST00000475693 KCNA5P22460 613 aa18.43■□□□□ 0.54
ATG4B-217ENST00000475693 LMAN2Q12907 356 aa18.43■□□□□ 0.54
ATG4B-217ENST00000475693 IHHQ14623 411 aa18.43■□□□□ 0.54
ATG4B-217ENST00000475693 SKIV2LQ15477 1246 aaKnown RBP18.43■□□□□ 0.54
ATG4B-217ENST00000475693 VITQ6UXI7 678 aa18.43■□□□□ 0.54
ATG4B-217ENST00000475693 KDELC2Q7Z4H8 507 aa18.43■□□□□ 0.54
ATG4B-217ENST00000475693 PGBD5Q8N414 524 aa18.43■□□□□ 0.54
ATG4B-217ENST00000475693 PDCD7Q8N8D1 485 aaKnown RBP18.43■□□□□ 0.54
ATG4B-217ENST00000475693 NAT8LQ8N9F0 302 aa18.43■□□□□ 0.54
ATG4B-217ENST00000475693 PRCCQ92733 491 aaPredicted RBP18.43■□□□□ 0.54
ATG4B-217ENST00000475693 GAS2L1Q99501 681 aaPredicted RBP18.43■□□□□ 0.54
ATG4B-217ENST00000475693 NT5MQ9NPB1 228 aa18.43■□□□□ 0.54
ATG4B-217ENST00000475693 BPTFQ12830 3046 aa18.43■□□□□ 0.54
ATG4B-217ENST00000475693 K7ERQ8 282 aa18.43■□□□□ 0.54
ATG4B-217ENST00000475693 MT-CYBP00156 380 aaPredicted RBP18.43■□□□□ 0.54
ATG4B-217ENST00000475693 HLA-FP30511 346 aa18.43■□□□□ 0.54
ATG4B-217ENST00000475693 PARP15Q460N3 678 aa18.43■□□□□ 0.54
ATG4B-217ENST00000475693 MSS51Q4VC12 460 aa18.43■□□□□ 0.54
ATG4B-217ENST00000475693 FNBP1LQ5T0N5 605 aa18.43■□□□□ 0.54
ATG4B-217ENST00000475693 SMRP1Q8NCR6 262 aa18.43■□□□□ 0.54
ATG4B-217ENST00000475693 BPIFB1Q8TDL5 484 aa18.43■□□□□ 0.54
ATG4B-217ENST00000475693 LRRC45Q96CN5 670 aa18.43■□□□□ 0.54
ATG4B-217ENST00000475693 TEKT5Q96M29 485 aa18.43■□□□□ 0.54
ATG4B-217ENST00000475693 CDX2Q99626 313 aaPredicted RBP18.43■□□□□ 0.54
ATG4B-217ENST00000475693 ABCB8Q9NUT2 735 aa18.43■□□□□ 0.54
ATG4B-217ENST00000475693 GDE1Q9NZC3 331 aa18.43■□□□□ 0.54
ATG4B-217ENST00000475693 VPS28Q9UK41 221 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms