RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 STRNO43815 780 aa6.9□□□□□ -1.3
SMC5-203ENST00000475540 ITGB6P18564 788 aa6.9□□□□□ -1.3
SMC5-203ENST00000475540 RXRAP19793 462 aa6.9□□□□□ -1.3
SMC5-203ENST00000475540 TKTP29401 623 aaKnown RBP6.9□□□□□ -1.3
SMC5-203ENST00000475540 ENTPD1P49961 510 aa6.9□□□□□ -1.3
SMC5-203ENST00000475540 HTR6P50406 440 aa6.9□□□□□ -1.3
SMC5-203ENST00000475540 MVDP53602 400 aa6.9□□□□□ -1.3
SMC5-203ENST00000475540 ARL4CP56559 192 aa6.9□□□□□ -1.3
SMC5-203ENST00000475540 ARHGAP8P85298 464 aa6.9□□□□□ -1.3
SMC5-203ENST00000475540 GOLGA8FQ08AF8 430 aa6.9□□□□□ -1.3
SMC5-203ENST00000475540 CTXN3Q4LDR2 81 aa6.9□□□□□ -1.3
SMC5-203ENST00000475540 Q6ZTK2 550 aa6.9□□□□□ -1.3
SMC5-203ENST00000475540 CTU1Q7Z7A3 348 aaKnown RBP6.9□□□□□ -1.3
SMC5-203ENST00000475540 NKAPQ8N5F7 415 aaKnown RBP6.9□□□□□ -1.3
SMC5-203ENST00000475540 LINS1Q8NG48 757 aa6.9□□□□□ -1.3
SMC5-203ENST00000475540 NCSTNQ92542 709 aa6.9□□□□□ -1.3
SMC5-203ENST00000475540 KRCC1Q9NPI7 259 aaPredicted RBP6.9□□□□□ -1.3
SMC5-203ENST00000475540 MST1RQ04912 1400 aa6.9□□□□□ -1.31
SMC5-203ENST00000475540 B9A039 149 aa6.89□□□□□ -1.31
SMC5-203ENST00000475540 IKBKBO14920 756 aa6.89□□□□□ -1.31
SMC5-203ENST00000475540 KIF1CO43896 1103 aaKnown RBP6.89□□□□□ -1.31
SMC5-203ENST00000475540 ARSBP15848 533 aa6.89□□□□□ -1.31
SMC5-203ENST00000475540 RFX2P48378 723 aa6.89□□□□□ -1.31
SMC5-203ENST00000475540 THBS3P49746 956 aa6.89□□□□□ -1.31
SMC5-203ENST00000475540 BYSLQ13895 437 aaKnown RBP6.89□□□□□ -1.31
SMC5-203ENST00000475540 ANKRD44Q8N8A2 993 aa6.89□□□□□ -1.31
SMC5-203ENST00000475540 SCAIQ8N9R8 606 aa6.89□□□□□ -1.31
SMC5-203ENST00000475540 BICD2Q8TD16 824 aa6.89□□□□□ -1.31
SMC5-203ENST00000475540 HDAC7Q8WUI4 952 aa6.89□□□□□ -1.31
SMC5-203ENST00000475540 TEFMQ96QE5 360 aaKnown RBP6.89□□□□□ -1.31
SMC5-203ENST00000475540 NOD2Q9HC29 1040 aa6.89□□□□□ -1.31
SMC5-203ENST00000475540 NCKIPSDQ9NZQ3 722 aa6.89□□□□□ -1.31
SMC5-203ENST00000475540 UPB1Q9UBR1 384 aa6.89□□□□□ -1.31
SMC5-203ENST00000475540 ICKQ9UPZ9 632 aa6.89□□□□□ -1.31
SMC5-203ENST00000475540 OSGIN2Q9Y236 505 aa6.89□□□□□ -1.31
SMC5-203ENST00000475540 RRP7AQ9Y3A4 280 aaKnown RBP6.89□□□□□ -1.31
SMC5-203ENST00000475540 MORC2Q9Y6X9 1032 aaPredicted RBP6.89□□□□□ -1.31
SMC5-203ENST00000475540 IGKV2D-30A0A075B6S6 120 aa6.88□□□□□ -1.31
SMC5-203ENST00000475540 C17orf102A2RUQ5 167 aa6.88□□□□□ -1.31
SMC5-203ENST00000475540 STX16-NPEPL1H3BU86 382 aa6.88□□□□□ -1.31
SMC5-203ENST00000475540 STX16O14662 325 aa6.88□□□□□ -1.31
SMC5-203ENST00000475540 RNMTO43148 476 aaKnown RBP6.88□□□□□ -1.31
SMC5-203ENST00000475540 DDAH2O95865 285 aa6.88□□□□□ -1.31
SMC5-203ENST00000475540 UNGP13051 313 aaPredicted RBP6.88□□□□□ -1.31
SMC5-203ENST00000475540 CPA1P15085 419 aa6.88□□□□□ -1.31
SMC5-203ENST00000475540 CHRNB2P17787 502 aa6.88□□□□□ -1.31
SMC5-203ENST00000475540 CCKARP32238 428 aa6.88□□□□□ -1.31
SMC5-203ENST00000475540 CLCNKBP51801 687 aa6.88□□□□□ -1.31
SMC5-203ENST00000475540 TMPRSS3P57727 454 aa6.88□□□□□ -1.31
SMC5-203ENST00000475540 GPR18Q14330 331 aa6.88□□□□□ -1.31
SMC5-203ENST00000475540 CBWD5Q5RIA9 395 aa6.88□□□□□ -1.31
SMC5-203ENST00000475540 LCE1AQ5T7P2 110 aa6.88□□□□□ -1.31
SMC5-203ENST00000475540 DCAF12L2Q5VW00 463 aa6.88□□□□□ -1.31
SMC5-203ENST00000475540 HORMAD2Q8N7B1 307 aa6.88□□□□□ -1.31
SMC5-203ENST00000475540 ENGASEQ8NFI3 743 aa6.88□□□□□ -1.31
SMC5-203ENST00000475540 RILPL2Q969X0 211 aa6.88□□□□□ -1.31
SMC5-203ENST00000475540 MARK4Q96L34 752 aa6.88□□□□□ -1.31
SMC5-203ENST00000475540 NTPCRQ9BSD7 190 aaKnown RBP6.88□□□□□ -1.31
SMC5-203ENST00000475540 HERPUD2Q9BSE4 406 aa6.88□□□□□ -1.31
SMC5-203ENST00000475540 POLDIP3Q9BY77 421 aaKnown RBP6.88□□□□□ -1.31
SMC5-203ENST00000475540 PLAC1Q9HBJ0 212 aa6.88□□□□□ -1.31
SMC5-203ENST00000475540 PLK2Q9NYY3 685 aa6.88□□□□□ -1.31
SMC5-203ENST00000475540 PLEKHB1Q9UF11 243 aaPredicted RBP6.88□□□□□ -1.31
SMC5-203ENST00000475540 FEM1BQ9UK73 627 aa6.88□□□□□ -1.31
SMC5-203ENST00000475540 AVPR1AP37288 418 aa6.87□□□□□ -1.31
SMC5-203ENST00000475540 MLH1P40692 756 aa6.87□□□□□ -1.31
SMC5-203ENST00000475540 PAPOLAP51003 745 aaKnown RBP6.87□□□□□ -1.31
SMC5-203ENST00000475540 ROR2Q01974 943 aaKnown RBP6.87□□□□□ -1.31
SMC5-203ENST00000475540 SYTL3Q4VX76 610 aa6.87□□□□□ -1.31
SMC5-203ENST00000475540 OTUD1Q5VV17 481 aaPredicted RBP6.87□□□□□ -1.31
SMC5-203ENST00000475540 HEPHL1Q6MZM0 1159 aa6.87□□□□□ -1.31
SMC5-203ENST00000475540 WDR5BQ86VZ2 330 aa6.87□□□□□ -1.31
SMC5-203ENST00000475540 ZDHHC23Q8IYP9 409 aa6.87□□□□□ -1.31
SMC5-203ENST00000475540 CEP70Q8NHQ1 597 aa6.87□□□□□ -1.31
SMC5-203ENST00000475540 OIT3Q8WWZ8 545 aa6.87□□□□□ -1.31
SMC5-203ENST00000475540 MASTLQ96GX5 879 aa6.87□□□□□ -1.31
SMC5-203ENST00000475540 URB1-AS1Q96HZ7 61 aa6.87□□□□□ -1.31
SMC5-203ENST00000475540 THOC3Q96J01 351 aaKnown RBP6.87□□□□□ -1.31
SMC5-203ENST00000475540 HIPK2Q9H2X6 1198 aa6.87□□□□□ -1.31
SMC5-203ENST00000475540 CATSPERBQ9H7T0 1116 aa6.87□□□□□ -1.31
SMC5-203ENST00000475540 ITM2CQ9NQX7 267 aa6.87□□□□□ -1.31
SMC5-203ENST00000475540 INSL5Q9Y5Q6 135 aa6.87□□□□□ -1.31
SMC5-203ENST00000475540 OR6C68A6NDL8 312 aa6.86□□□□□ -1.31
SMC5-203ENST00000475540 BECN2A8MW95 431 aa6.86□□□□□ -1.31
SMC5-203ENST00000475540 IFRD1O00458 451 aaPredicted RBP6.86□□□□□ -1.31
SMC5-203ENST00000475540 CBX6O95503 412 aa6.86□□□□□ -1.31
SMC5-203ENST00000475540 MYZAPP0CAP1 466 aa6.86□□□□□ -1.31
SMC5-203ENST00000475540 T-ENOLP0DO92 83 aa6.86□□□□□ -1.31
SMC5-203ENST00000475540 ARRB2P32121 409 aa6.86□□□□□ -1.31
SMC5-203ENST00000475540 HALP42357 657 aa6.86□□□□□ -1.31
SMC5-203ENST00000475540 SELENOVP59797 346 aa6.86□□□□□ -1.31
SMC5-203ENST00000475540 ZP1P60852 638 aa6.86□□□□□ -1.31
SMC5-203ENST00000475540 DUSP6Q16828 381 aa6.86□□□□□ -1.31
SMC5-203ENST00000475540 AP5B1Q2VPB7 878 aa6.86□□□□□ -1.31
SMC5-203ENST00000475540 DENND1BQ6P3S1 775 aa6.86□□□□□ -1.31
SMC5-203ENST00000475540 PDXDC1Q6P996 788 aa6.86□□□□□ -1.31
SMC5-203ENST00000475540 C2CD5Q86YS7 1000 aa6.86□□□□□ -1.31
SMC5-203ENST00000475540 CADM3Q8N126 398 aa6.86□□□□□ -1.31
SMC5-203ENST00000475540 B4GALNT2Q8NHY0 566 aa6.86□□□□□ -1.31
SMC5-203ENST00000475540 TMEM204Q9BSN7 226 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms