RNA–Protein interactions for RNA: ENST00000475218.2

UPF3A-204, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 1 (best)

Gene UPF3A, Length 1,791 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-204ENST00000475218 RACK1P63244 317 aaKnown RBP14.45□□□□□ -0.1
UPF3A-204ENST00000475218 SHBQ15464 509 aa14.45□□□□□ -0.1
UPF3A-204ENST00000475218 CDO1Q16878 200 aa14.45□□□□□ -0.1
UPF3A-204ENST00000475218 ZNF423Q2M1K9 1284 aa14.45□□□□□ -0.1
UPF3A-204ENST00000475218 IL27RAQ6UWB1 636 aa14.45□□□□□ -0.1
UPF3A-204ENST00000475218 GLRX5Q86SX6 157 aa14.45□□□□□ -0.1
UPF3A-204ENST00000475218 SLCO6A1Q86UG4 719 aa14.45□□□□□ -0.1
UPF3A-204ENST00000475218 NLRP14Q86W24 1093 aa14.45□□□□□ -0.1
UPF3A-204ENST00000475218 CHCHD4Q8N4Q1 142 aa14.45□□□□□ -0.1
UPF3A-204ENST00000475218 CCDC185Q8N715 623 aa14.45□□□□□ -0.1
UPF3A-204ENST00000475218 CHST14Q8NCH0 376 aa14.45□□□□□ -0.1
UPF3A-204ENST00000475218 PIP4K2CQ8TBX8 421 aa14.45□□□□□ -0.1
UPF3A-204ENST00000475218 OR8D1Q8WZ84 308 aa14.45□□□□□ -0.1
UPF3A-204ENST00000475218 PAXBP1Q9Y5B6 917 aa14.45□□□□□ -0.1
UPF3A-204ENST00000475218 PCDHGB2Q9Y5G2 931 aa14.45□□□□□ -0.1
UPF3A-204ENST00000475218 PLXNB3Q9ULL4 1909 aa14.44□□□□□ -0.1
UPF3A-204ENST00000475218 CHD6Q8TD26 2715 aa14.44□□□□□ -0.1
UPF3A-204ENST00000475218 ALOX15BO15296 676 aa14.44□□□□□ -0.1
UPF3A-204ENST00000475218 PLRG1O43660 514 aaKnown RBP14.44□□□□□ -0.1
UPF3A-204ENST00000475218 TPM2P07951 284 aa14.44□□□□□ -0.1
UPF3A-204ENST00000475218 OR1E1P30953 314 aa14.44□□□□□ -0.1
UPF3A-204ENST00000475218 ARF5P84085 180 aa14.44□□□□□ -0.1
UPF3A-204ENST00000475218 NRG1Q02297 640 aaPredicted RBP14.44□□□□□ -0.1
UPF3A-204ENST00000475218 ANO6Q4KMQ2 910 aa14.44□□□□□ -0.1
UPF3A-204ENST00000475218 PRAMEF14Q5SWL7 426 aa14.44□□□□□ -0.1
UPF3A-204ENST00000475218 PIP5KL1Q5T9C9 394 aa14.44□□□□□ -0.1
UPF3A-204ENST00000475218 UNQ6494/PRO21346Q6UXR6 183 aa14.44□□□□□ -0.1
UPF3A-204ENST00000475218 LRRC31Q6UY01 552 aa14.44□□□□□ -0.1
UPF3A-204ENST00000475218 IRF2BP2Q7Z5L9 587 aa14.44□□□□□ -0.1
UPF3A-204ENST00000475218 PNPLA1Q8N8W4 532 aa14.44□□□□□ -0.1
UPF3A-204ENST00000475218 ATP11CQ8NB49 1132 aa14.44□□□□□ -0.1
UPF3A-204ENST00000475218 BAP1Q92560 729 aa14.44□□□□□ -0.1
UPF3A-204ENST00000475218 PPP1R9BQ96SB3 815 aa14.44□□□□□ -0.1
UPF3A-204ENST00000475218 C2orf49Q9BVC5 232 aaPredicted RBP14.44□□□□□ -0.1
UPF3A-204ENST00000475218 ADAM22Q9P0K1 906 aa14.44□□□□□ -0.1
UPF3A-204ENST00000475218 PPARGC1AQ9UBK2 798 aaKnown RBP14.44□□□□□ -0.1
UPF3A-204ENST00000475218 PTPRBP23467 1997 aa14.43□□□□□ -0.1
UPF3A-204ENST00000475218 ILVBLA1L0T0 632 aa14.43□□□□□ -0.1
UPF3A-204ENST00000475218 FAM221BA6H8Z2 402 aa14.43□□□□□ -0.1
UPF3A-204ENST00000475218 GOLGA6L22H0YM25 854 aa14.43□□□□□ -0.1
UPF3A-204ENST00000475218 PROS1P07225 676 aa14.43□□□□□ -0.1
UPF3A-204ENST00000475218 FTH1P19P0C7X4 201 aa14.43□□□□□ -0.1
UPF3A-204ENST00000475218 ACVRL1P37023 503 aa14.43□□□□□ -0.1
UPF3A-204ENST00000475218 IL9RQ01113 521 aa14.43□□□□□ -0.1
UPF3A-204ENST00000475218 TEAD4Q15561 434 aa14.43□□□□□ -0.1
UPF3A-204ENST00000475218 PPP1R15BQ5SWA1 713 aa14.43□□□□□ -0.1
UPF3A-204ENST00000475218 ACBD5Q5T8D3 534 aaPredicted RBP14.43□□□□□ -0.1
UPF3A-204ENST00000475218 WDR59Q6PJI9 974 aa14.43□□□□□ -0.1
UPF3A-204ENST00000475218 STRADAQ7RTN6 431 aa14.43□□□□□ -0.1
UPF3A-204ENST00000475218 DRC7Q8IY82 874 aa14.43□□□□□ -0.1
UPF3A-204ENST00000475218 ARRDC3Q96B67 414 aa14.43□□□□□ -0.1
UPF3A-204ENST00000475218 AGPAT1Q99943 283 aa14.43□□□□□ -0.1
UPF3A-204ENST00000475218 FUCA2Q9BTY2 467 aa14.43□□□□□ -0.1
UPF3A-204ENST00000475218 ZYG11BQ9C0D3 744 aa14.43□□□□□ -0.1
UPF3A-204ENST00000475218 TNKS2Q9H2K2 1166 aa14.43□□□□□ -0.1
UPF3A-204ENST00000475218 TMEM51Q9NW97 253 aa14.43□□□□□ -0.1
UPF3A-204ENST00000475218 TAS2R14Q9NYV8 317 aa14.43□□□□□ -0.1
UPF3A-204ENST00000475218 OR12D3Q9UGF7 316 aa14.43□□□□□ -0.1
UPF3A-204ENST00000475218 NEUROG3Q9Y4Z2 214 aa14.43□□□□□ -0.1
UPF3A-204ENST00000475218 DSPP15924 2871 aaKnown RBP14.43□□□□□ -0.1
UPF3A-204ENST00000475218 SLC7A4O43246 635 aa14.42□□□□□ -0.1
UPF3A-204ENST00000475218 BNIP3LO60238 219 aa14.42□□□□□ -0.1
UPF3A-204ENST00000475218 DKK1O94907 266 aa14.42□□□□□ -0.1
UPF3A-204ENST00000475218 KRT3P12035 628 aa14.42□□□□□ -0.1
UPF3A-204ENST00000475218 SDC4P31431 198 aa14.42□□□□□ -0.1
UPF3A-204ENST00000475218 NSFP46459 744 aaKnown RBP14.42□□□□□ -0.1
UPF3A-204ENST00000475218 KRT83P78385 493 aa14.42□□□□□ -0.1
UPF3A-204ENST00000475218 SFSWAPQ12872 951 aaKnown RBP14.42□□□□□ -0.1
UPF3A-204ENST00000475218 HNRNPDQ14103 355 aaKnown RBP14.42□□□□□ -0.1
UPF3A-204ENST00000475218 C6orf118Q5T5N4 469 aa14.42□□□□□ -0.1
UPF3A-204ENST00000475218 E4F1Q66K89 784 aaPredicted RBP14.42□□□□□ -0.1
UPF3A-204ENST00000475218 C22orf39Q6P5X5 142 aa14.42□□□□□ -0.1
UPF3A-204ENST00000475218 ZNF783Q6ZMS7 281 aa14.42□□□□□ -0.1
UPF3A-204ENST00000475218 C3orf20Q8ND61 904 aa14.42□□□□□ -0.1
UPF3A-204ENST00000475218 FAM172AQ8WUF8 416 aa14.42□□□□□ -0.1
UPF3A-204ENST00000475218 PCMTD1Q96MG8 357 aaPredicted RBP14.42□□□□□ -0.1
UPF3A-204ENST00000475218 BPIFA3Q9BQP9 254 aa14.42□□□□□ -0.1
UPF3A-204ENST00000475218 ACE2Q9BYF1 805 aaPredicted RBP14.42□□□□□ -0.1
UPF3A-204ENST00000475218 OSBPL2Q9H1P3 480 aa14.42□□□□□ -0.1
UPF3A-204ENST00000475218 RTN4Q9NQC3 1192 aaKnown RBP14.42□□□□□ -0.1
UPF3A-204ENST00000475218 NBEAQ8NFP9 2946 aa14.42□□□□□ -0.1
UPF3A-204ENST00000475218 TBC1D3DA0A087WVF3 549 aa14.42□□□□□ -0.1
UPF3A-204ENST00000475218 TBC1D3IA0A087WXS9 549 aa14.42□□□□□ -0.1
UPF3A-204ENST00000475218 TBC1D3EA0A087X179 549 aa14.42□□□□□ -0.1
UPF3A-204ENST00000475218 TBC1D3KA0A087X1G2 549 aa14.42□□□□□ -0.1
UPF3A-204ENST00000475218 A0A1B0GTQ1 180 aa14.42□□□□□ -0.1
UPF3A-204ENST00000475218 TBC1D3FA6NER0 549 aaPredicted RBP14.42□□□□□ -0.1
UPF3A-204ENST00000475218 TBC1D3LB9A6J9 549 aa14.42□□□□□ -0.1
UPF3A-204ENST00000475218 PCDHGA12O60330 932 aa14.42□□□□□ -0.1
UPF3A-204ENST00000475218 LRIG2O94898 1065 aa14.42□□□□□ -0.1
UPF3A-204ENST00000475218 CAPNS1P04632 268 aa14.42□□□□□ -0.1
UPF3A-204ENST00000475218 TBC1D3HP0C7X1 549 aa14.42□□□□□ -0.1
UPF3A-204ENST00000475218 CDK11BP21127 795 aaKnown RBP14.42□□□□□ -0.1
UPF3A-204ENST00000475218 MAT2AP31153 395 aaKnown RBP14.42□□□□□ -0.1
UPF3A-204ENST00000475218 CHRNA3P32297 505 aa14.42□□□□□ -0.1
UPF3A-204ENST00000475218 RPL7AP62424 266 aaKnown RBP14.42□□□□□ -0.1
UPF3A-204ENST00000475218 OGDHQ02218 1023 aa14.42□□□□□ -0.1
UPF3A-204ENST00000475218 GNA12Q03113 381 aa14.42□□□□□ -0.1
UPF3A-204ENST00000475218 TBC1D3GQ6DHY5 549 aa14.42□□□□□ -0.1
UPF3A-204ENST00000475218 TBC1D3CQ6IPX1 549 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms