RNA–Protein interactions for RNA: ENST00000475043.5

PDPN-204, Transcript of podoplanin, humanhuman

TSL 3 BASIC

Gene PDPN, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-204ENST00000475043 DNAAF2Q9NVR5 837 aaKnown RBP9.66□□□□□ -0.86
PDPN-204ENST00000475043 OR12D3Q9UGF7 316 aa9.66□□□□□ -0.86
PDPN-204ENST00000475043 VPS51Q9UID3 782 aa9.66□□□□□ -0.86
PDPN-204ENST00000475043 FZD4Q9ULV1 537 aa9.66□□□□□ -0.86
PDPN-204ENST00000475043 SLCO1B1Q9Y6L6 691 aa9.66□□□□□ -0.86
PDPN-204ENST00000475043 GON4LQ3T8J9 2241 aa9.66□□□□□ -0.86
PDPN-204ENST00000475043 IGLV3-10A0A075B6K4 115 aa9.65□□□□□ -0.86
PDPN-204ENST00000475043 TBC1D3DA0A087WVF3 549 aa9.65□□□□□ -0.86
PDPN-204ENST00000475043 TBC1D3IA0A087WXS9 549 aa9.65□□□□□ -0.86
PDPN-204ENST00000475043 TBC1D3EA0A087X179 549 aa9.65□□□□□ -0.86
PDPN-204ENST00000475043 TBC1D3KA0A087X1G2 549 aa9.65□□□□□ -0.86
PDPN-204ENST00000475043 SPAARA0A1B0GVQ0 90 aa9.65□□□□□ -0.86
PDPN-204ENST00000475043 SYCE3A1L190 88 aa9.65□□□□□ -0.86
PDPN-204ENST00000475043 TBC1D3FA6NER0 549 aaPredicted RBP9.65□□□□□ -0.86
PDPN-204ENST00000475043 LRRC53A6NM62 1247 aa9.65□□□□□ -0.86
PDPN-204ENST00000475043 TMCO5BA8MYB1 307 aa9.65□□□□□ -0.86
PDPN-204ENST00000475043 TBC1D3LB9A6J9 549 aa9.65□□□□□ -0.86
PDPN-204ENST00000475043 C1QTNF3-AMACRE9PGA6 284 aa9.65□□□□□ -0.86
PDPN-204ENST00000475043 K7ERQ8 282 aa9.65□□□□□ -0.86
PDPN-204ENST00000475043 PLK4O00444 970 aa9.65□□□□□ -0.86
PDPN-204ENST00000475043 MT-CO1P00395 513 aa9.65□□□□□ -0.86
PDPN-204ENST00000475043 IGHV4-34P06331 123 aa9.65□□□□□ -0.86
PDPN-204ENST00000475043 TBC1D3HP0C7X1 549 aa9.65□□□□□ -0.86
PDPN-204ENST00000475043 SRCP12931 536 aa9.65□□□□□ -0.86
PDPN-204ENST00000475043 CD59P13987 128 aa9.65□□□□□ -0.86
PDPN-204ENST00000475043 TNFAIP3P21580 790 aa9.65□□□□□ -0.86
PDPN-204ENST00000475043 GLDCP23378 1020 aa9.65□□□□□ -0.86
PDPN-204ENST00000475043 RRM1P23921 792 aa9.65□□□□□ -0.86
PDPN-204ENST00000475043 PMLP29590 882 aa9.65□□□□□ -0.86
PDPN-204ENST00000475043 ADRA1BP35368 520 aa9.65□□□□□ -0.86
PDPN-204ENST00000475043 PTPN9P43378 593 aa9.65□□□□□ -0.86
PDPN-204ENST00000475043 METAP1P53582 386 aa9.65□□□□□ -0.86
PDPN-204ENST00000475043 ADPRHP54922 357 aa9.65□□□□□ -0.86
PDPN-204ENST00000475043 SIM1P81133 766 aaPredicted RBP9.65□□□□□ -0.86
PDPN-204ENST00000475043 SLC14A1Q13336 389 aa9.65□□□□□ -0.86
PDPN-204ENST00000475043 HLA-BQ31612 363 aa9.65□□□□□ -0.86
PDPN-204ENST00000475043 FAM46CQ5VWP2 391 aa9.65□□□□□ -0.86
PDPN-204ENST00000475043 TBC1D3GQ6DHY5 549 aa9.65□□□□□ -0.86
PDPN-204ENST00000475043 TBC1D3CQ6IPX1 549 aa9.65□□□□□ -0.86
PDPN-204ENST00000475043 DNAJC24Q6P3W2 148 aa9.65□□□□□ -0.86
PDPN-204ENST00000475043 SCYL2Q6P3W7 929 aa9.65□□□□□ -0.86
PDPN-204ENST00000475043 WDR59Q6PJI9 974 aa9.65□□□□□ -0.86
PDPN-204ENST00000475043 LAYNQ6UX15 382 aa9.65□□□□□ -0.86
PDPN-204ENST00000475043 MON1BQ7L1V2 547 aa9.65□□□□□ -0.86
PDPN-204ENST00000475043 STRADAQ7RTN6 431 aa9.65□□□□□ -0.86
PDPN-204ENST00000475043 TBC1D3Q8IZP1 549 aaPredicted RBP9.65□□□□□ -0.86
PDPN-204ENST00000475043 DCAF4L2Q8NA75 395 aa9.65□□□□□ -0.86
PDPN-204ENST00000475043 C3orf20Q8ND61 904 aa9.65□□□□□ -0.86
PDPN-204ENST00000475043 OR7D4Q8NG98 312 aa9.65□□□□□ -0.86
PDPN-204ENST00000475043 OR2T34Q8NGX1 318 aa9.65□□□□□ -0.86
PDPN-204ENST00000475043 PIP4K2CQ8TBX8 421 aa9.65□□□□□ -0.86
PDPN-204ENST00000475043 SETD7Q8WTS6 366 aaKnown RBP9.65□□□□□ -0.86
PDPN-204ENST00000475043 CCDC114Q96M63 670 aa9.65□□□□□ -0.86
PDPN-204ENST00000475043 CAMK1GQ96NX5 476 aa9.65□□□□□ -0.86
PDPN-204ENST00000475043 MCEEQ96PE7 176 aa9.65□□□□□ -0.86
PDPN-204ENST00000475043 PSMB7Q99436 277 aa9.65□□□□□ -0.86
PDPN-204ENST00000475043 IL21RQ9HBE5 538 aa9.65□□□□□ -0.86
PDPN-204ENST00000475043 ATP13A1Q9HD20 1204 aa9.65□□□□□ -0.86
PDPN-204ENST00000475043 AASDHPPTQ9NRN7 309 aa9.65□□□□□ -0.86
PDPN-204ENST00000475043 ADAMTS1Q9UHI8 967 aa9.65□□□□□ -0.86
PDPN-204ENST00000475043 SARDHQ9UL12 918 aa9.65□□□□□ -0.86
PDPN-204ENST00000475043 HS3ST2Q9Y278 367 aa9.65□□□□□ -0.86
PDPN-204ENST00000475043 ANKRD6Q9Y2G4 727 aa9.65□□□□□ -0.86
PDPN-204ENST00000475043 PCDHB9Q9Y5E1 797 aa9.65□□□□□ -0.86
PDPN-204ENST00000475043 A0A1W2PPC4 97 aa9.64□□□□□ -0.87
PDPN-204ENST00000475043 ILVBLA1L0T0 632 aa9.64□□□□□ -0.87
PDPN-204ENST00000475043 SIGLEC16A6NMB1 481 aa9.64□□□□□ -0.87
PDPN-204ENST00000475043 UPK3BL1B0FP48 263 aa9.64□□□□□ -0.87
PDPN-204ENST00000475043 UPK3BL2E5RIL1 263 aa9.64□□□□□ -0.87
PDPN-204ENST00000475043 KPNA3O00505 521 aaPredicted RBP9.64□□□□□ -0.87
PDPN-204ENST00000475043 MCF2LO15068 1137 aa9.64□□□□□ -0.87
PDPN-204ENST00000475043 ALOX15BO15296 676 aa9.64□□□□□ -0.87
PDPN-204ENST00000475043 SMAD6O43541 496 aaKnown RBP9.64□□□□□ -0.87
PDPN-204ENST00000475043 SH3BP5O60239 455 aa9.64□□□□□ -0.87
PDPN-204ENST00000475043 RTN2O75298 545 aa9.64□□□□□ -0.87
PDPN-204ENST00000475043 GJB3O75712 270 aa9.64□□□□□ -0.87
PDPN-204ENST00000475043 PLEKP08567 350 aaPredicted RBP9.64□□□□□ -0.87
PDPN-204ENST00000475043 DESP17661 470 aa9.64□□□□□ -0.87
PDPN-204ENST00000475043 DRD3P35462 400 aa9.64□□□□□ -0.87
PDPN-204ENST00000475043 RECQLP46063 649 aaPredicted RBP9.64□□□□□ -0.87
PDPN-204ENST00000475043 GRIA4P48058 902 aa9.64□□□□□ -0.87
PDPN-204ENST00000475043 HDAC4P56524 1084 aa9.64□□□□□ -0.87
PDPN-204ENST00000475043 GSCP56915 257 aaPredicted RBP9.64□□□□□ -0.87
PDPN-204ENST00000475043 C21orf59P57076 290 aa9.64□□□□□ -0.87
PDPN-204ENST00000475043 RPL7AP62424 266 aaKnown RBP9.64□□□□□ -0.87
PDPN-204ENST00000475043 TPM4P67936 248 aa9.64□□□□□ -0.87
PDPN-204ENST00000475043 BNC1Q01954 994 aa9.64□□□□□ -0.87
PDPN-204ENST00000475043 GNA12Q03113 381 aa9.64□□□□□ -0.87
PDPN-204ENST00000475043 ASIC2Q16515 512 aa9.64□□□□□ -0.87
PDPN-204ENST00000475043 KIF19Q2TAC6 998 aa9.64□□□□□ -0.87
PDPN-204ENST00000475043 KLHL40Q2TBA0 621 aa9.64□□□□□ -0.87
PDPN-204ENST00000475043 ACAD10Q6JQN1 1059 aa9.64□□□□□ -0.87
PDPN-204ENST00000475043 RETSATQ6NUM9 610 aa9.64□□□□□ -0.87
PDPN-204ENST00000475043 DCUN1D2Q6PH85 259 aa9.64□□□□□ -0.87
PDPN-204ENST00000475043 ZNF783Q6ZMS7 281 aa9.64□□□□□ -0.87
PDPN-204ENST00000475043 IRF2BP2Q7Z5L9 587 aa9.64□□□□□ -0.87
PDPN-204ENST00000475043 SLFN11Q7Z7L1 901 aa9.64□□□□□ -0.87
PDPN-204ENST00000475043 PIP4P1Q86T03 277 aa9.64□□□□□ -0.87
PDPN-204ENST00000475043 NAXDQ8IW45 347 aa9.64□□□□□ -0.87
PDPN-204ENST00000475043 CCDC185Q8N715 623 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms