RNA–Protein interactions for RNA: ENST00000474617.1

CCM2-206, Transcript of CCM2 scaffold protein, humanhuman

TSL 5 BASIC

Gene CCM2, Length 1,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-206ENST00000474617 HERC2P3Q9BVR0 1158 aa22.15■■□□□ 1.14
CCM2-206ENST00000474617 FSD1LQ9BXM9 530 aa22.15■■□□□ 1.14
CCM2-206ENST00000474617 NUDT5Q9UKK9 219 aa22.15■■□□□ 1.14
CCM2-206ENST00000474617 TET1Q8NFU7 2136 aa22.14■■□□□ 1.14
CCM2-206ENST00000474617 NUP205Q92621 2012 aa22.14■■□□□ 1.13
CCM2-206ENST00000474617 HMX2A2RU54 273 aa22.14■■□□□ 1.13
CCM2-206ENST00000474617 F5H423 210 aaPredicted RBP22.14■■□□□ 1.13
CCM2-206ENST00000474617 RAMP2O60895 175 aa22.14■■□□□ 1.13
CCM2-206ENST00000474617 ABLIM3O94929 683 aa22.14■■□□□ 1.13
CCM2-206ENST00000474617 MPOP05164 745 aa22.14■■□□□ 1.13
CCM2-206ENST00000474617 ATP5BP06576 529 aaKnown RBP22.14■■□□□ 1.13
CCM2-206ENST00000474617 LAG3P18627 525 aa22.14■■□□□ 1.13
CCM2-206ENST00000474617 ADRA1AP35348 466 aa22.14■■□□□ 1.13
CCM2-206ENST00000474617 LIMK2P53671 638 aa22.14■■□□□ 1.13
CCM2-206ENST00000474617 CRADDP78560 199 aa22.14■■□□□ 1.13
CCM2-206ENST00000474617 PDE1BQ01064 536 aa22.14■■□□□ 1.13
CCM2-206ENST00000474617 DSG1Q02413 1049 aa22.14■■□□□ 1.13
CCM2-206ENST00000474617 SLC14A2Q15849 920 aa22.14■■□□□ 1.13
CCM2-206ENST00000474617 TRIM60Q495X7 471 aa22.14■■□□□ 1.13
CCM2-206ENST00000474617 MARC1Q5VT66 337 aa22.14■■□□□ 1.13
CCM2-206ENST00000474617 FBXL22Q6P050 247 aa22.14■■□□□ 1.13
CCM2-206ENST00000474617 PKN3Q6P5Z2 889 aa22.14■■□□□ 1.13
CCM2-206ENST00000474617 FAM47EQ6ZV65 393 aa22.14■■□□□ 1.13
CCM2-206ENST00000474617 CMTR2Q8IYT2 770 aaKnown RBP22.14■■□□□ 1.13
CCM2-206ENST00000474617 TOP1MTQ969P6 601 aa22.14■■□□□ 1.13
CCM2-206ENST00000474617 B3GALT6Q96L58 329 aa22.14■■□□□ 1.13
CCM2-206ENST00000474617 DDX50Q9BQ39 737 aaKnown RBP22.14■■□□□ 1.13
CCM2-206ENST00000474617 TSSK1BQ9BXA7 367 aa22.14■■□□□ 1.13
CCM2-206ENST00000474617 TRIM55Q9BYV6 548 aa22.14■■□□□ 1.13
CCM2-206ENST00000474617 PPP1R12CQ9BZL4 782 aa22.14■■□□□ 1.13
CCM2-206ENST00000474617 SP110Q9HB58 689 aa22.14■■□□□ 1.13
CCM2-206ENST00000474617 MPP6Q9NZW5 540 aa22.14■■□□□ 1.13
CCM2-206ENST00000474617 SIRPGQ9P1W8 387 aa22.14■■□□□ 1.13
CCM2-206ENST00000474617 DOCK4Q8N1I0 1966 aa22.13■■□□□ 1.13
CCM2-206ENST00000474617 CFAP73A6NFT4 308 aa22.13■■□□□ 1.13
CCM2-206ENST00000474617 F5H5T6 163 aa22.13■■□□□ 1.13
CCM2-206ENST00000474617 H0YHG0 523 aa22.13■■□□□ 1.13
CCM2-206ENST00000474617 ATF6P18850 670 aa22.13■■□□□ 1.13
CCM2-206ENST00000474617 MAGEA12P43365 314 aa22.13■■□□□ 1.13
CCM2-206ENST00000474617 SCTRP47872 440 aa22.13■■□□□ 1.13
CCM2-206ENST00000474617 HARS2P49590 506 aaKnown RBP22.13■■□□□ 1.13
CCM2-206ENST00000474617 ATN1P54259 1190 aaPredicted RBP22.13■■□□□ 1.13
CCM2-206ENST00000474617 VEPH1Q14D04 833 aa22.13■■□□□ 1.13
CCM2-206ENST00000474617 RABGAP1LQ5R372 815 aa22.13■■□□□ 1.13
CCM2-206ENST00000474617 HECTD3Q5T447 861 aa22.13■■□□□ 1.13
CCM2-206ENST00000474617 CGB2Q6NT52 195 aa22.13■■□□□ 1.13
CCM2-206ENST00000474617 NLRP9Q7RTR0 991 aa22.13■■□□□ 1.13
CCM2-206ENST00000474617 KCNMB4Q86W47 210 aa22.13■■□□□ 1.13
CCM2-206ENST00000474617 TMEM173Q86WV6 379 aaPredicted RBP22.13■■□□□ 1.13
CCM2-206ENST00000474617 MIB1Q86YT6 1006 aa22.13■■□□□ 1.13
CCM2-206ENST00000474617 BCL7CQ8WUZ0 217 aaPredicted RBP22.13■■□□□ 1.13
CCM2-206ENST00000474617 TMEM169Q96HH4 297 aa22.13■■□□□ 1.13
CCM2-206ENST00000474617 C7orf26Q96N11 449 aa22.13■■□□□ 1.13
CCM2-206ENST00000474617 RANBP9Q96S59 729 aa22.13■■□□□ 1.13
CCM2-206ENST00000474617 SIKE1Q9BRV8 207 aa22.13■■□□□ 1.13
CCM2-206ENST00000474617 CRISPLD1Q9H336 500 aa22.13■■□□□ 1.13
CCM2-206ENST00000474617 NOL6Q9H6R4 1146 aaKnown RBP22.13■■□□□ 1.13
CCM2-206ENST00000474617 TMEM39AQ9NV64 488 aa22.13■■□□□ 1.13
CCM2-206ENST00000474617 UXTQ9UBK9 157 aaPredicted RBP22.13■■□□□ 1.13
CCM2-206ENST00000474617 SCN5AQ14524 2016 aa22.13■■□□□ 1.13
CCM2-206ENST00000474617 SHROOM3Q8TF72 1996 aa22.12■■□□□ 1.13
CCM2-206ENST00000474617 NT5C1B-RDH14C9J2C7 533 aa22.12■■□□□ 1.13
CCM2-206ENST00000474617 UGT1A9O60656 530 aa22.12■■□□□ 1.13
CCM2-206ENST00000474617 HLA-DQB2P05538 268 aa22.12■■□□□ 1.13
CCM2-206ENST00000474617 CLTBP09497 229 aa22.12■■□□□ 1.13
CCM2-206ENST00000474617 OR1D2P34982 312 aa22.12■■□□□ 1.13
CCM2-206ENST00000474617 BMPR2Q13873 1038 aa22.12■■□□□ 1.13
CCM2-206ENST00000474617 POLD3Q15054 466 aaPredicted RBP22.12■■□□□ 1.13
CCM2-206ENST00000474617 CCDC153Q494R4 210 aa22.12■■□□□ 1.13
CCM2-206ENST00000474617 GALNTL6Q49A17 601 aa22.12■■□□□ 1.13
CCM2-206ENST00000474617 TEDDM1Q5T9Z0 273 aa22.12■■□□□ 1.13
CCM2-206ENST00000474617 PRSS55Q6UWB4 352 aaPredicted RBP22.12■■□□□ 1.13
CCM2-206ENST00000474617 ARHGAP36Q6ZRI8 547 aa22.12■■□□□ 1.13
CCM2-206ENST00000474617 OTOP3Q7RTS5 596 aa22.12■■□□□ 1.13
CCM2-206ENST00000474617 OTOAQ7RTW8 1153 aa22.12■■□□□ 1.13
CCM2-206ENST00000474617 TAS1R1Q7RTX1 841 aa22.12■■□□□ 1.13
CCM2-206ENST00000474617 DEFB128Q7Z7B8 93 aa22.12■■□□□ 1.13
CCM2-206ENST00000474617 CNTN4Q8IWV2 1026 aa22.12■■□□□ 1.13
CCM2-206ENST00000474617 C10orf67Q8IYJ2 551 aa22.12■■□□□ 1.13
CCM2-206ENST00000474617 BBS5Q8N3I7 341 aa22.12■■□□□ 1.13
CCM2-206ENST00000474617 ZNF689Q96CS4 500 aaPredicted RBP22.12■■□□□ 1.13
CCM2-206ENST00000474617 IMP4Q96G21 291 aaKnown RBP22.12■■□□□ 1.13
CCM2-206ENST00000474617 RPRD1AQ96P16 312 aaPredicted RBP22.12■■□□□ 1.13
CCM2-206ENST00000474617 UGT1A7Q9HAW7 530 aa22.12■■□□□ 1.13
CCM2-206ENST00000474617 UGT1A10Q9HAW8 530 aa22.12■■□□□ 1.13
CCM2-206ENST00000474617 UGT1A8Q9HAW9 530 aa22.12■■□□□ 1.13
CCM2-206ENST00000474617 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP22.12■■□□□ 1.13
CCM2-206ENST00000474617 PCMTD2Q9NV79 361 aa22.12■■□□□ 1.13
CCM2-206ENST00000474617 TRPM5Q9NZQ8 1165 aa22.12■■□□□ 1.13
CCM2-206ENST00000474617 ZNF212Q9UDV6 495 aa22.12■■□□□ 1.13
CCM2-206ENST00000474617 MID2Q9UJV3 735 aa22.12■■□□□ 1.13
CCM2-206ENST00000474617 C2CD2LO14523 706 aa22.11■■□□□ 1.13
CCM2-206ENST00000474617 USP12O75317 370 aa22.11■■□□□ 1.13
CCM2-206ENST00000474617 LATS1O95835 1130 aa22.11■■□□□ 1.13
CCM2-206ENST00000474617 PEX11BO96011 259 aa22.11■■□□□ 1.13
CCM2-206ENST00000474617 TACR2P21452 398 aa22.11■■□□□ 1.13
CCM2-206ENST00000474617 PPM1AP35813 382 aa22.11■■□□□ 1.13
CCM2-206ENST00000474617 PBX3P40426 434 aa22.11■■□□□ 1.13
CCM2-206ENST00000474617 ALDH1A3P47895 512 aa22.11■■□□□ 1.13
CCM2-206ENST00000474617 LIG3P49916 1009 aa22.11■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms