RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 KCNK9Q9NPC2 374 aa2.07□□□□□ -2.08
CCDC39-203ENST00000473854 ZFP57Q9NU63 452 aa2.07□□□□□ -2.08
CCDC39-203ENST00000473854 CADPSQ9ULU8 1353 aa2.07□□□□□ -2.08
CCDC39-203ENST00000473854 CUX2O14529 1486 aa2.07□□□□□ -2.08
CCDC39-203ENST00000473854 RAD54L2Q9Y4B4 1467 aa2.07□□□□□ -2.08
CCDC39-203ENST00000473854 ZNF318Q5VUA4 2279 aa2.06□□□□□ -2.08
CCDC39-203ENST00000473854 C17orf102A2RUQ5 167 aa2.06□□□□□ -2.08
CCDC39-203ENST00000473854 MCIDASD6RGH6 385 aa2.06□□□□□ -2.08
CCDC39-203ENST00000473854 KIF1CO43896 1103 aaKnown RBP2.06□□□□□ -2.08
CCDC39-203ENST00000473854 TUSC2O75896 110 aa2.06□□□□□ -2.08
CCDC39-203ENST00000473854 MT-ND5P03915 603 aa2.06□□□□□ -2.08
CCDC39-203ENST00000473854 PRSS1P07477 247 aa2.06□□□□□ -2.08
CCDC39-203ENST00000473854 UNGP13051 313 aaPredicted RBP2.06□□□□□ -2.08
CCDC39-203ENST00000473854 IGFBP2P18065 325 aa2.06□□□□□ -2.08
CCDC39-203ENST00000473854 ZNF132P52740 706 aa2.06□□□□□ -2.08
CCDC39-203ENST00000473854 SHC2P98077 582 aa2.06□□□□□ -2.08
CCDC39-203ENST00000473854 AMPD3Q01432 767 aa2.06□□□□□ -2.08
CCDC39-203ENST00000473854 ZNF239Q16600 458 aaKnown RBP2.06□□□□□ -2.08
CCDC39-203ENST00000473854 XKR6Q5GH73 641 aa2.06□□□□□ -2.08
CCDC39-203ENST00000473854 TYW3Q6IPR3 259 aaKnown RBP2.06□□□□□ -2.08
CCDC39-203ENST00000473854 PIK3AP1Q6ZUJ8 805 aa2.06□□□□□ -2.08
CCDC39-203ENST00000473854 PATL1Q86TB9 770 aaKnown RBP2.06□□□□□ -2.08
CCDC39-203ENST00000473854 TTC30AQ86WT1 665 aa2.06□□□□□ -2.08
CCDC39-203ENST00000473854 ZDHHC23Q8IYP9 409 aa2.06□□□□□ -2.08
CCDC39-203ENST00000473854 CEP76Q8TAP6 659 aa2.06□□□□□ -2.08
CCDC39-203ENST00000473854 LGALS12Q96DT0 336 aa2.06□□□□□ -2.08
CCDC39-203ENST00000473854 MSLNLQ96KJ4 702 aa2.06□□□□□ -2.08
CCDC39-203ENST00000473854 SNX22Q96L94 193 aa2.06□□□□□ -2.08
CCDC39-203ENST00000473854 TMEM60Q9H2L4 133 aa2.06□□□□□ -2.08
CCDC39-203ENST00000473854 FNIP2Q9P278 1114 aa2.06□□□□□ -2.08
CCDC39-203ENST00000473854 RNF215Q9Y6U7 377 aa2.06□□□□□ -2.08
CCDC39-203ENST00000473854 A0A1B0GVM2 712 aa2.05□□□□□ -2.08
CCDC39-203ENST00000473854 GAGE7O76087 117 aa2.05□□□□□ -2.08
CCDC39-203ENST00000473854 GAGE12FP0CL80 117 aa2.05□□□□□ -2.08
CCDC39-203ENST00000473854 GAGE12GP0CL81 117 aa2.05□□□□□ -2.08
CCDC39-203ENST00000473854 GAGE12IP0CL82 117 aa2.05□□□□□ -2.08
CCDC39-203ENST00000473854 FGF5P12034 268 aa2.05□□□□□ -2.08
CCDC39-203ENST00000473854 SP100P23497 879 aaPredicted RBP2.05□□□□□ -2.08
CCDC39-203ENST00000473854 MCM3P25205 808 aa2.05□□□□□ -2.08
CCDC39-203ENST00000473854 KLRC2P26717 231 aa2.05□□□□□ -2.08
CCDC39-203ENST00000473854 ADPRHP54922 357 aa2.05□□□□□ -2.08
CCDC39-203ENST00000473854 DRG2P55039 364 aaKnown RBP2.05□□□□□ -2.08
CCDC39-203ENST00000473854 TMPRSS3P57727 454 aa2.05□□□□□ -2.08
CCDC39-203ENST00000473854 TLE3Q04726 772 aa2.05□□□□□ -2.08
CCDC39-203ENST00000473854 GAGE1Q13065 139 aa2.05□□□□□ -2.08
CCDC39-203ENST00000473854 GAGE4Q13068 117 aa2.05□□□□□ -2.08
CCDC39-203ENST00000473854 VWA5B1Q5TIE3 1220 aa2.05□□□□□ -2.08
CCDC39-203ENST00000473854 APOA5Q6Q788 366 aa2.05□□□□□ -2.08
CCDC39-203ENST00000473854 C16orf89Q6UX73 402 aa2.05□□□□□ -2.08
CCDC39-203ENST00000473854 MDGA2Q7Z553 956 aa2.05□□□□□ -2.08
CCDC39-203ENST00000473854 KCNH5Q8NCM2 988 aa2.05□□□□□ -2.08
CCDC39-203ENST00000473854 RFWD2Q8NHY2 731 aa2.05□□□□□ -2.08
CCDC39-203ENST00000473854 DEPTORQ8TB45 409 aa2.05□□□□□ -2.08
CCDC39-203ENST00000473854 SLC35G2Q8TBE7 412 aa2.05□□□□□ -2.08
CCDC39-203ENST00000473854 IP6K1Q92551 441 aa2.05□□□□□ -2.08
CCDC39-203ENST00000473854 GRAMD1AQ96CP6 724 aa2.05□□□□□ -2.08
CCDC39-203ENST00000473854 ATOH8Q96SQ7 321 aa2.05□□□□□ -2.08
CCDC39-203ENST00000473854 FBRSL1Q9HCM7 1045 aaKnown RBP2.05□□□□□ -2.08
CCDC39-203ENST00000473854 TBC1D23Q9NUY8 699 aa2.05□□□□□ -2.08
CCDC39-203ENST00000473854 ZDHHC7Q9NXF8 308 aa2.05□□□□□ -2.08
CCDC39-203ENST00000473854 IP6K2Q9UHH9 426 aa2.05□□□□□ -2.08
CCDC39-203ENST00000473854 ZBTB1Q9Y2K1 713 aa2.05□□□□□ -2.08
CCDC39-203ENST00000473854 TNIKQ9UKE5 1360 aa2.05□□□□□ -2.08
CCDC39-203ENST00000473854 ARHGAP35Q9NRY4 1499 aa2.05□□□□□ -2.08
CCDC39-203ENST00000473854 MRC2Q9UBG0 1479 aa2.05□□□□□ -2.08
CCDC39-203ENST00000473854 TIAM1Q13009 1591 aa2.05□□□□□ -2.08
CCDC39-203ENST00000473854 GXYLT2A0PJZ3 443 aa2.04□□□□□ -2.08
CCDC39-203ENST00000473854 DYTNA2CJ06 578 aa2.04□□□□□ -2.08
CCDC39-203ENST00000473854 EFCAB5A4FU69 1503 aa2.04□□□□□ -2.08
CCDC39-203ENST00000473854 HNRNPCL2B2RXH8 293 aa2.04□□□□□ -2.08
CCDC39-203ENST00000473854 NPIPB11E5RHQ5 1161 aa2.04□□□□□ -2.08
CCDC39-203ENST00000473854 C16orf97H3BN30 126 aa2.04□□□□□ -2.08
CCDC39-203ENST00000473854 NPC1O15118 1278 aa2.04□□□□□ -2.08
CCDC39-203ENST00000473854 THAP12O43422 761 aa2.04□□□□□ -2.08
CCDC39-203ENST00000473854 TMCC1O94876 653 aa2.04□□□□□ -2.08
CCDC39-203ENST00000473854 KAT7O95251 611 aa2.04□□□□□ -2.08
CCDC39-203ENST00000473854 AFPP02771 609 aaKnown RBP2.04□□□□□ -2.08
CCDC39-203ENST00000473854 ANXA2P07355 339 aaKnown RBP2.04□□□□□ -2.08
CCDC39-203ENST00000473854 IGHV4-30-4P0DP06 118 aa2.04□□□□□ -2.08
CCDC39-203ENST00000473854 MYF6P23409 242 aa2.04□□□□□ -2.08
CCDC39-203ENST00000473854 MST1P26927 711 aa2.04□□□□□ -2.08
CCDC39-203ENST00000473854 TYK2P29597 1187 aa2.04□□□□□ -2.08
CCDC39-203ENST00000473854 LIFRP42702 1097 aa2.04□□□□□ -2.08
CCDC39-203ENST00000473854 CYP2J2P51589 502 aa2.04□□□□□ -2.08
CCDC39-203ENST00000473854 LUMP51884 338 aaPredicted RBP2.04□□□□□ -2.08
CCDC39-203ENST00000473854 CACNB3P54284 484 aa2.04□□□□□ -2.08
CCDC39-203ENST00000473854 NLRP5P59047 1200 aa2.04□□□□□ -2.08
CCDC39-203ENST00000473854 SREBF2Q12772 1141 aa2.04□□□□□ -2.08
CCDC39-203ENST00000473854 ATP1A4Q13733 1029 aa2.04□□□□□ -2.08
CCDC39-203ENST00000473854 CNN3Q15417 329 aaKnown RBP2.04□□□□□ -2.08
CCDC39-203ENST00000473854 PLK5Q496M5 336 aa2.04□□□□□ -2.08
CCDC39-203ENST00000473854 CEP170Q5SW79 1584 aa2.04□□□□□ -2.08
CCDC39-203ENST00000473854 NCAPH2Q6IBW4 605 aa2.04□□□□□ -2.08
CCDC39-203ENST00000473854 KLHL24Q6TFL4 600 aa2.04□□□□□ -2.08
CCDC39-203ENST00000473854 KIF27Q86VH2 1401 aa2.04□□□□□ -2.08
CCDC39-203ENST00000473854 SFR1Q86XK3 245 aa2.04□□□□□ -2.08
CCDC39-203ENST00000473854 VPS8Q8N3P4 1428 aa2.04□□□□□ -2.08
CCDC39-203ENST00000473854 METTL27Q8N6F8 245 aaPredicted RBP2.04□□□□□ -2.08
CCDC39-203ENST00000473854 TEX45Q8NA69 505 aa2.04□□□□□ -2.08
CCDC39-203ENST00000473854 NEXN-AS1Q8NBZ9 246 aa2.04□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms