RNA–Protein interactions for RNA: ENST00000473711.1

SP140-208, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 644 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-208ENST00000473711 CYBBP04839 570 aa10.96□□□□□ -0.65
SP140-208ENST00000473711 HOXB8P17481 243 aaPredicted RBP10.96□□□□□ -0.65
SP140-208ENST00000473711 IGFBP4P22692 258 aa10.96□□□□□ -0.65
SP140-208ENST00000473711 PSMB4P28070 264 aa10.96□□□□□ -0.65
SP140-208ENST00000473711 CD68P34810 354 aaPredicted RBP10.96□□□□□ -0.65
SP140-208ENST00000473711 HSPA9P38646 679 aaKnown RBP10.96□□□□□ -0.65
SP140-208ENST00000473711 VIPR2P41587 438 aa10.96□□□□□ -0.65
SP140-208ENST00000473711 LMAN1P49257 510 aa10.96□□□□□ -0.65
SP140-208ENST00000473711 IFI35P80217 286 aaPredicted RBP10.96□□□□□ -0.65
SP140-208ENST00000473711 DLX2Q07687 328 aaPredicted RBP10.96□□□□□ -0.65
SP140-208ENST00000473711 IL10RBQ08334 325 aa10.96□□□□□ -0.65
SP140-208ENST00000473711 USP4Q13107 963 aa10.96□□□□□ -0.65
SP140-208ENST00000473711 ADGRE1Q14246 886 aa10.96□□□□□ -0.65
SP140-208ENST00000473711 ANO4Q32M45 955 aa10.96□□□□□ -0.65
SP140-208ENST00000473711 FSCBQ5H9T9 825 aa10.96□□□□□ -0.65
SP140-208ENST00000473711 FAM78AQ5JUQ0 283 aa10.96□□□□□ -0.65
SP140-208ENST00000473711 ATAT1Q5SQI0 421 aa10.96□□□□□ -0.65
SP140-208ENST00000473711 CXorf57Q6NSI4 855 aaKnown RBP10.96□□□□□ -0.65
SP140-208ENST00000473711 OTOP3Q7RTS5 596 aa10.96□□□□□ -0.65
SP140-208ENST00000473711 TMC3Q7Z5M5 1100 aa10.96□□□□□ -0.65
SP140-208ENST00000473711 SETD3Q86TU7 594 aaPredicted RBP10.96□□□□□ -0.65
SP140-208ENST00000473711 HOOK3Q86VS8 718 aa10.96□□□□□ -0.65
SP140-208ENST00000473711 NPAS3Q8IXF0 933 aa10.96□□□□□ -0.65
SP140-208ENST00000473711 ZCCHC9Q8N567 271 aaKnown RBP10.96□□□□□ -0.65
SP140-208ENST00000473711 CELF5Q8N6W0 485 aaKnown RBP10.96□□□□□ -0.65
SP140-208ENST00000473711 CNTD1Q8N815 330 aa10.96□□□□□ -0.65
SP140-208ENST00000473711 ST13P5Q8NFI4 369 aaPredicted RBP10.96□□□□□ -0.65
SP140-208ENST00000473711 NSMCE1Q8WV22 266 aa10.96□□□□□ -0.65
SP140-208ENST00000473711 MAML1Q92585 1016 aa10.96□□□□□ -0.65
SP140-208ENST00000473711 FGF13Q92913 245 aa10.96□□□□□ -0.65
SP140-208ENST00000473711 PABPC5Q96DU9 382 aaKnown RBP10.96□□□□□ -0.65
SP140-208ENST00000473711 RSPRY1Q96DX4 576 aa10.96□□□□□ -0.65
SP140-208ENST00000473711 TEKT5Q96M29 485 aa10.96□□□□□ -0.65
SP140-208ENST00000473711 LRRC3BQ96PB8 259 aa10.96□□□□□ -0.65
SP140-208ENST00000473711 VAT1Q99536 393 aa10.96□□□□□ -0.65
SP140-208ENST00000473711 IL12RB2Q99665 862 aa10.96□□□□□ -0.65
SP140-208ENST00000473711 TXLNGYQ9BZA5 131 aa10.96□□□□□ -0.65
SP140-208ENST00000473711 FOXP3Q9BZS1 431 aa10.96□□□□□ -0.65
SP140-208ENST00000473711 MUC3BQ9H195 1237 aa10.96□□□□□ -0.65
SP140-208ENST00000473711 S1PR5Q9H228 398 aa10.96□□□□□ -0.65
SP140-208ENST00000473711 CLDND1Q9NY35 253 aa10.96□□□□□ -0.65
SP140-208ENST00000473711 CLEC1BQ9P126 229 aa10.96□□□□□ -0.65
SP140-208ENST00000473711 IGSF9Q9P2J2 1179 aa10.96□□□□□ -0.65
SP140-208ENST00000473711 TBC1D14Q9P2M4 693 aa10.96□□□□□ -0.65
SP140-208ENST00000473711 RSPH14Q9UHP6 348 aa10.96□□□□□ -0.65
SP140-208ENST00000473711 SHOC2Q9UQ13 582 aa10.96□□□□□ -0.65
SP140-208ENST00000473711 WNT6Q9Y6F9 365 aa10.96□□□□□ -0.65
SP140-208ENST00000473711 CEP290O15078 2479 aa10.96□□□□□ -0.66
SP140-208ENST00000473711 A0A1W2PPC1 479 aa10.95□□□□□ -0.66
SP140-208ENST00000473711 KDELR3O43731 214 aa10.95□□□□□ -0.66
SP140-208ENST00000473711 PRAMEF11O60813 436 aa10.95□□□□□ -0.66
SP140-208ENST00000473711 SASH3O75995 380 aa10.95□□□□□ -0.66
SP140-208ENST00000473711 TMEM63AO94886 807 aa10.95□□□□□ -0.66
SP140-208ENST00000473711 PEX11BO96011 259 aa10.95□□□□□ -0.66
SP140-208ENST00000473711 APRTP07741 180 aa10.95□□□□□ -0.66
SP140-208ENST00000473711 TCF3P15923 654 aa10.95□□□□□ -0.66
SP140-208ENST00000473711 NFKB1P19838 968 aa10.95□□□□□ -0.66
SP140-208ENST00000473711 GLDCP23378 1020 aa10.95□□□□□ -0.66
SP140-208ENST00000473711 MZF1P28698 734 aaPredicted RBP10.95□□□□□ -0.66
SP140-208ENST00000473711 WEE1P30291 646 aa10.95□□□□□ -0.66
SP140-208ENST00000473711 ETFBP38117 255 aa10.95□□□□□ -0.66
SP140-208ENST00000473711 CSKP41240 450 aa10.95□□□□□ -0.66
SP140-208ENST00000473711 MLLT3P42568 568 aaPredicted RBP10.95□□□□□ -0.66
SP140-208ENST00000473711 MAGEA6P43360 314 aa10.95□□□□□ -0.66
SP140-208ENST00000473711 PMS2P54278 862 aa10.95□□□□□ -0.66
SP140-208ENST00000473711 OXCT1P55809 520 aa10.95□□□□□ -0.66
SP140-208ENST00000473711 SLC10A7Q0GE19 358 aa10.95□□□□□ -0.66
SP140-208ENST00000473711 SEMA5AQ13591 1074 aa10.95□□□□□ -0.66
SP140-208ENST00000473711 CDH18Q13634 790 aa10.95□□□□□ -0.66
SP140-208ENST00000473711 SPARCL1Q14515 664 aa10.95□□□□□ -0.66
SP140-208ENST00000473711 SLMAPQ14BN4 828 aa10.95□□□□□ -0.66
SP140-208ENST00000473711 HP1BP3Q5SSJ5 553 aaPredicted RBP10.95□□□□□ -0.66
SP140-208ENST00000473711 FNBP1LQ5T0N5 605 aa10.95□□□□□ -0.66
SP140-208ENST00000473711 MARC1Q5VT66 337 aa10.95□□□□□ -0.66
SP140-208ENST00000473711 ITPRIPL1Q6GPH6 555 aa10.95□□□□□ -0.66
SP140-208ENST00000473711 CES5AQ6NT32 575 aa10.95□□□□□ -0.66
SP140-208ENST00000473711 TMEM25Q86YD3 366 aa10.95□□□□□ -0.66
SP140-208ENST00000473711 MFN1Q8IWA4 741 aa10.95□□□□□ -0.66
SP140-208ENST00000473711 CCDC117Q8IWD4 279 aaPredicted RBP10.95□□□□□ -0.66
SP140-208ENST00000473711 MICALL1Q8N3F8 863 aa10.95□□□□□ -0.66
SP140-208ENST00000473711 MREGQ8N565 214 aa10.95□□□□□ -0.66
SP140-208ENST00000473711 WFDC5Q8TCV5 224 aa10.95□□□□□ -0.66
SP140-208ENST00000473711 UBLCP1Q8WVY7 318 aaPredicted RBP10.95□□□□□ -0.66
SP140-208ENST00000473711 SMARCD2Q92925 531 aa10.95□□□□□ -0.66
SP140-208ENST00000473711 IRF7Q92985 503 aa10.95□□□□□ -0.66
SP140-208ENST00000473711 EXOC4Q96A65 974 aa10.95□□□□□ -0.66
SP140-208ENST00000473711 FAM161BQ96MY7 647 aa10.95□□□□□ -0.66
SP140-208ENST00000473711 RBM15Q96T37 977 aaKnown RBP eCLIP10.95□□□□□ -0.66
SP140-208ENST00000473711 TSPYL1Q9H0U9 437 aa10.95□□□□□ -0.66
SP140-208ENST00000473711 GBA3Q9H227 469 aa10.95□□□□□ -0.66
SP140-208ENST00000473711 SEMA4AQ9H3S1 761 aa10.95□□□□□ -0.66
SP140-208ENST00000473711 GLOD4Q9HC38 313 aa10.95□□□□□ -0.66
SP140-208ENST00000473711 ATP13A1Q9HD20 1204 aa10.95□□□□□ -0.66
SP140-208ENST00000473711 SAYSD1Q9NPB0 183 aa10.95□□□□□ -0.66
SP140-208ENST00000473711 NT5MQ9NPB1 228 aa10.95□□□□□ -0.66
SP140-208ENST00000473711 CLEC4EQ9ULY5 219 aa10.95□□□□□ -0.66
SP140-208ENST00000473711 TTLL3Q9Y4R7 772 aa10.95□□□□□ -0.66
SP140-208ENST00000473711 ACTL7AQ9Y615 435 aa10.95□□□□□ -0.66
SP140-208ENST00000473711 TMEM265A0A087WTH1 108 aa10.94□□□□□ -0.66
SP140-208ENST00000473711 CBX4O00257 560 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms