RNA–Protein interactions for RNA: ENST00000473371.1

NHLRC3-204, Transcript of NHL repeat containing 3, humanhuman

TSL 2

Gene NHLRC3, Length 3,237 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-204ENST00000473371 GRM3Q14832 879 aa14.48□□□□□ -0.09
NHLRC3-204ENST00000473371 TREML2Q5T2D2 321 aa14.48□□□□□ -0.09
NHLRC3-204ENST00000473371 CERCAMQ5T4B2 595 aa14.48□□□□□ -0.09
NHLRC3-204ENST00000473371 BORAQ6PGQ7 559 aa14.48□□□□□ -0.09
NHLRC3-204ENST00000473371 NT5DC4Q86YG4 428 aa14.48□□□□□ -0.09
NHLRC3-204ENST00000473371 ANKRD52Q8NB46 1076 aa14.48□□□□□ -0.09
NHLRC3-204ENST00000473371 RDH11Q8TC12 318 aa14.48□□□□□ -0.09
NHLRC3-204ENST00000473371 NDRG1Q92597 394 aaKnown RBP14.48□□□□□ -0.09
NHLRC3-204ENST00000473371 CCT7Q99832 543 aa14.48□□□□□ -0.09
NHLRC3-204ENST00000473371 APOL2Q9BQE5 337 aa14.48□□□□□ -0.09
NHLRC3-204ENST00000473371 HAUS8Q9BT25 410 aa14.48□□□□□ -0.09
NHLRC3-204ENST00000473371 DNAAF2Q9NVR5 837 aaKnown RBP14.48□□□□□ -0.09
NHLRC3-204ENST00000473371 PPP1R1BQ9UD71 204 aaPredicted RBP14.48□□□□□ -0.09
NHLRC3-204ENST00000473371 CIDEBQ9UHD4 219 aa14.48□□□□□ -0.09
NHLRC3-204ENST00000473371 PADI4Q9UM07 663 aa14.48□□□□□ -0.09
NHLRC3-204ENST00000473371 RUVBL2Q9Y230 463 aaKnown RBP14.48□□□□□ -0.09
NHLRC3-204ENST00000473371 TRIM38O00635 465 aa14.48□□□□□ -0.09
NHLRC3-204ENST00000473371 CABYRO75952 493 aa14.48□□□□□ -0.09
NHLRC3-204ENST00000473371 JUNP05412 331 aaKnown RBP14.48□□□□□ -0.09
NHLRC3-204ENST00000473371 MATKP42679 507 aa14.48□□□□□ -0.09
NHLRC3-204ENST00000473371 GMPSP49915 693 aaPredicted RBP14.48□□□□□ -0.09
NHLRC3-204ENST00000473371 COG7P83436 770 aa14.48□□□□□ -0.09
NHLRC3-204ENST00000473371 ANO4Q32M45 955 aa14.48□□□□□ -0.09
NHLRC3-204ENST00000473371 DCAF6Q58WW2 860 aa14.48□□□□□ -0.09
NHLRC3-204ENST00000473371 IL23RQ5VWK5 629 aa14.48□□□□□ -0.09
NHLRC3-204ENST00000473371 ATP6V1E2Q96A05 226 aa14.48□□□□□ -0.09
NHLRC3-204ENST00000473371 SLC2A11Q9BYW1 496 aa14.48□□□□□ -0.09
NHLRC3-204ENST00000473371 IL22Q9GZX6 179 aa14.48□□□□□ -0.09
NHLRC3-204ENST00000473371 SEMA6AQ9H2E6 1030 aa14.48□□□□□ -0.09
NHLRC3-204ENST00000473371 SUDS3Q9H7L9 328 aaPredicted RBP14.48□□□□□ -0.09
NHLRC3-204ENST00000473371 PRDM16Q9HAZ2 1276 aa14.48□□□□□ -0.09
NHLRC3-204ENST00000473371 CITO14578 2027 aa14.47□□□□□ -0.09
NHLRC3-204ENST00000473371 A0A1B0GTW7 788 aa14.47□□□□□ -0.09
NHLRC3-204ENST00000473371 EEF2KO00418 725 aaKnown RBP14.47□□□□□ -0.09
NHLRC3-204ENST00000473371 ACOT8O14734 319 aa14.47□□□□□ -0.09
NHLRC3-204ENST00000473371 INSRRP14616 1297 aa14.47□□□□□ -0.09
NHLRC3-204ENST00000473371 SCNN1AP37088 669 aa14.47□□□□□ -0.09
NHLRC3-204ENST00000473371 AVPR1AP37288 418 aa14.47□□□□□ -0.09
NHLRC3-204ENST00000473371 USP10Q14694 798 aaKnown RBP14.47□□□□□ -0.09
NHLRC3-204ENST00000473371 RFTN1Q14699 578 aaPredicted RBP14.47□□□□□ -0.09
NHLRC3-204ENST00000473371 KIZQ2M2Z5 673 aa14.47□□□□□ -0.09
NHLRC3-204ENST00000473371 MGAT5BQ3V5L5 792 aa14.47□□□□□ -0.09
NHLRC3-204ENST00000473371 FBXO16Q8IX29 292 aaPredicted RBP14.47□□□□□ -0.09
NHLRC3-204ENST00000473371 CNTD1Q8N815 330 aa14.47□□□□□ -0.09
NHLRC3-204ENST00000473371 TSPAN14Q8NG11 270 aa14.47□□□□□ -0.09
NHLRC3-204ENST00000473371 SLC7A14Q8TBB6 771 aa14.47□□□□□ -0.09
NHLRC3-204ENST00000473371 MPHOSPH6Q99547 160 aaKnown RBP14.47□□□□□ -0.09
NHLRC3-204ENST00000473371 SPATC1LQ9H0A9 340 aa14.47□□□□□ -0.09
NHLRC3-204ENST00000473371 CXCL16Q9H2A7 254 aa14.47□□□□□ -0.09
NHLRC3-204ENST00000473371 CHCHD3Q9NX63 227 aaKnown RBP14.47□□□□□ -0.09
NHLRC3-204ENST00000473371 ANKRD6Q9Y2G4 727 aa14.47□□□□□ -0.09
NHLRC3-204ENST00000473371 COPG1Q9Y678 874 aaKnown RBP14.47□□□□□ -0.09
NHLRC3-204ENST00000473371 GJA3Q9Y6H8 435 aa14.47□□□□□ -0.09
NHLRC3-204ENST00000473371 CEPT1Q9Y6K0 416 aa14.47□□□□□ -0.09
NHLRC3-204ENST00000473371 LOC285556D6RIA3 1793 aa14.47□□□□□ -0.09
NHLRC3-204ENST00000473371 A0A0J9YVX5 310 aa14.47□□□□□ -0.09
NHLRC3-204ENST00000473371 CCDC78A2IDD5 438 aa14.47□□□□□ -0.09
NHLRC3-204ENST00000473371 IRF6O14896 467 aa14.47□□□□□ -0.09
NHLRC3-204ENST00000473371 DDHD2O94830 711 aa14.47□□□□□ -0.09
NHLRC3-204ENST00000473371 PTPN3P26045 913 aa14.47□□□□□ -0.09
NHLRC3-204ENST00000473371 ACADSBP45954 432 aa14.47□□□□□ -0.09
NHLRC3-204ENST00000473371 PRKAA2P54646 552 aa14.47□□□□□ -0.09
NHLRC3-204ENST00000473371 PITX1P78337 314 aaPredicted RBP14.47□□□□□ -0.09
NHLRC3-204ENST00000473371 DCTN2Q13561 401 aaKnown RBP14.47□□□□□ -0.09
NHLRC3-204ENST00000473371 SLC25A52Q3SY17 297 aa14.47□□□□□ -0.09
NHLRC3-204ENST00000473371 ALDH16A1Q8IZ83 802 aa14.47□□□□□ -0.09
NHLRC3-204ENST00000473371 CCNYL1Q8N7R7 359 aa14.47□□□□□ -0.09
NHLRC3-204ENST00000473371 KCTD4Q8WVF5 259 aa14.47□□□□□ -0.09
NHLRC3-204ENST00000473371 KLRG1Q96E93 195 aa14.47□□□□□ -0.09
NHLRC3-204ENST00000473371 CASS4Q9NQ75 786 aa14.47□□□□□ -0.09
NHLRC3-204ENST00000473371 CHRAC1Q9NRG0 131 aa14.47□□□□□ -0.09
NHLRC3-204ENST00000473371 TCAF2A6NFQ2 919 aa14.47□□□□□ -0.09
NHLRC3-204ENST00000473371 TPH1P17752 444 aa14.47□□□□□ -0.09
NHLRC3-204ENST00000473371 PTPN1P18031 435 aaKnown RBP14.47□□□□□ -0.09
NHLRC3-204ENST00000473371 ADARP55265 1226 aaKnown RBP14.47□□□□□ -0.09
NHLRC3-204ENST00000473371 POU5F1BQ06416 359 aa14.47□□□□□ -0.09
NHLRC3-204ENST00000473371 NSUN2Q08J23 767 aaKnown RBP eCLIP14.47□□□□□ -0.09
NHLRC3-204ENST00000473371 UNC93AQ86WB7 457 aa14.47□□□□□ -0.09
NHLRC3-204ENST00000473371 PCDH20Q8N6Y1 951 aaKnown RBP14.47□□□□□ -0.09
NHLRC3-204ENST00000473371 LZICQ8WZA0 190 aa14.47□□□□□ -0.09
NHLRC3-204ENST00000473371 COQ10BQ9H8M1 238 aa14.47□□□□□ -0.09
NHLRC3-204ENST00000473371 CNOT11Q9UKZ1 510 aaKnown RBP14.47□□□□□ -0.09
NHLRC3-204ENST00000473371 GMEB1Q9Y692 573 aa14.47□□□□□ -0.09
NHLRC3-204ENST00000473371 SCN4AP35499 1836 aa14.46□□□□□ -0.09
NHLRC3-204ENST00000473371 ARHGEF37A1IGU5 675 aa14.46□□□□□ -0.09
NHLRC3-204ENST00000473371 CAPNS1P04632 268 aa14.46□□□□□ -0.09
NHLRC3-204ENST00000473371 SBK3P0C264 359 aa14.46□□□□□ -0.09
NHLRC3-204ENST00000473371 ZNF26P17031 533 aaPredicted RBP14.46□□□□□ -0.09
NHLRC3-204ENST00000473371 CDH2P19022 906 aaPredicted RBP14.46□□□□□ -0.09
NHLRC3-204ENST00000473371 RPS12P25398 132 aaKnown RBP14.46□□□□□ -0.09
NHLRC3-204ENST00000473371 SCNN1BP51168 640 aa14.46□□□□□ -0.09
NHLRC3-204ENST00000473371 PSME3P61289 254 aa14.46□□□□□ -0.09
NHLRC3-204ENST00000473371 PPIDQ08752 370 aaKnown RBP14.46□□□□□ -0.09
NHLRC3-204ENST00000473371 NME3Q13232 169 aa14.46□□□□□ -0.09
NHLRC3-204ENST00000473371 PAFAH1B3Q15102 231 aaKnown RBP14.46□□□□□ -0.09
NHLRC3-204ENST00000473371 PTAR1Q7Z6K3 402 aaPredicted RBP14.46□□□□□ -0.09
NHLRC3-204ENST00000473371 GAB3Q8WWW8 586 aa14.46□□□□□ -0.09
NHLRC3-204ENST00000473371 TRPV6Q9H1D0 765 aa14.46□□□□□ -0.09
NHLRC3-204ENST00000473371 SETD4Q9NVD3 440 aa14.46□□□□□ -0.09
NHLRC3-204ENST00000473371 AP4S1Q9Y587 144 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms