RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 SRRM3A6NNA2 597 aaPredicted RBP15.66■□□□□ 0.1
VTI1A-203ENST00000472892 K7ERQ8 282 aa15.66■□□□□ 0.1
VTI1A-203ENST00000472892 EPHB6O15197 1021 aa15.66■□□□□ 0.1
VTI1A-203ENST00000472892 ZZEF1O43149 2961 aa15.66■□□□□ 0.1
VTI1A-203ENST00000472892 SRGAP2O75044 1071 aa15.66■□□□□ 0.1
VTI1A-203ENST00000472892 OR1E1P30953 314 aa15.66■□□□□ 0.1
VTI1A-203ENST00000472892 CHRNA3P32297 505 aa15.66■□□□□ 0.1
VTI1A-203ENST00000472892 SOX5P35711 763 aa15.66■□□□□ 0.1
VTI1A-203ENST00000472892 IL9RQ01113 521 aa15.66■□□□□ 0.1
VTI1A-203ENST00000472892 FMO1Q01740 532 aa15.66■□□□□ 0.1
VTI1A-203ENST00000472892 SHBQ15464 509 aa15.66■□□□□ 0.1
VTI1A-203ENST00000472892 SLC45A4Q5BKX6 768 aa15.66■□□□□ 0.1
VTI1A-203ENST00000472892 NAPEPLDQ6IQ20 393 aa15.66■□□□□ 0.1
VTI1A-203ENST00000472892 ZNF783Q6ZMS7 281 aa15.66■□□□□ 0.1
VTI1A-203ENST00000472892 TFAP2DQ7Z6R9 452 aa15.66■□□□□ 0.1
VTI1A-203ENST00000472892 TRIM69Q86WT6 500 aa15.66■□□□□ 0.1
VTI1A-203ENST00000472892 MFSD2AQ8NA29 543 aa15.66■□□□□ 0.1
VTI1A-203ENST00000472892 TMIEQ8NEW7 156 aa15.66■□□□□ 0.1
VTI1A-203ENST00000472892 ERVMER34-1Q9H9K5 563 aa15.66■□□□□ 0.1
VTI1A-203ENST00000472892 GDF3Q9NR23 364 aa15.66■□□□□ 0.1
VTI1A-203ENST00000472892 FAM207AQ9NSI2 230 aaPredicted RBP15.66■□□□□ 0.1
VTI1A-203ENST00000472892 PPARGC1AQ9UBK2 798 aaKnown RBP15.66■□□□□ 0.1
VTI1A-203ENST00000472892 DMTF1Q9Y222 760 aa15.66■□□□□ 0.1
VTI1A-203ENST00000472892 SIK3Q9Y2K2 1263 aa15.66■□□□□ 0.1
VTI1A-203ENST00000472892 PLXNA2O75051 1894 aa15.65■□□□□ 0.1
VTI1A-203ENST00000472892 LRRC10BA6NIK2 292 aa15.65■□□□□ 0.1
VTI1A-203ENST00000472892 SMAD6O43541 496 aaKnown RBP15.65■□□□□ 0.1
VTI1A-203ENST00000472892 BNIP3LO60238 219 aa15.65■□□□□ 0.1
VTI1A-203ENST00000472892 CTSLP07711 333 aa15.65■□□□□ 0.1
VTI1A-203ENST00000472892 TPM2P07951 284 aa15.65■□□□□ 0.1
VTI1A-203ENST00000472892 UNGP13051 313 aaPredicted RBP15.65■□□□□ 0.1
VTI1A-203ENST00000472892 RRM1P23921 792 aa15.65■□□□□ 0.1
VTI1A-203ENST00000472892 ANP32AP39687 249 aaKnown RBP15.65■□□□□ 0.1
VTI1A-203ENST00000472892 NXPH1P58417 271 aa15.65■□□□□ 0.1
VTI1A-203ENST00000472892 TAS2R38P59533 333 aa15.65■□□□□ 0.1
VTI1A-203ENST00000472892 SLC20A2Q08357 652 aa15.65■□□□□ 0.1
VTI1A-203ENST00000472892 INAVAQ3KP66 663 aa15.65■□□□□ 0.1
VTI1A-203ENST00000472892 POM121L1PQ3SYA9 428 aa15.65■□□□□ 0.1
VTI1A-203ENST00000472892 CCDC14Q49A88 953 aa15.65■□□□□ 0.1
VTI1A-203ENST00000472892 FKBP15Q5T1M5 1219 aa15.65■□□□□ 0.1
VTI1A-203ENST00000472892 FAM131BQ86XD5 332 aa15.65■□□□□ 0.1
VTI1A-203ENST00000472892 EMC1Q8N766 993 aa15.65■□□□□ 0.1
VTI1A-203ENST00000472892 SAP25Q8TEE9 199 aa15.65■□□□□ 0.1
VTI1A-203ENST00000472892 CCDC114Q96M63 670 aa15.65■□□□□ 0.1
VTI1A-203ENST00000472892 ZYG11BQ9C0D3 744 aa15.65■□□□□ 0.1
VTI1A-203ENST00000472892 PREBQ9HCU5 417 aa15.65■□□□□ 0.1
VTI1A-203ENST00000472892 NLRC4Q9NPP4 1024 aa15.65■□□□□ 0.1
VTI1A-203ENST00000472892 METTL5Q9NRN9 209 aaKnown RBP15.65■□□□□ 0.1
VTI1A-203ENST00000472892 TMEM131Q92545 1883 aa15.65■□□□□ 0.1
VTI1A-203ENST00000472892 CHD6Q8TD26 2715 aa15.65■□□□□ 0.1
VTI1A-203ENST00000472892 TAF4O00268 1085 aa15.64■□□□□ 0.09
VTI1A-203ENST00000472892 YKT6O15498 198 aa15.64■□□□□ 0.09
VTI1A-203ENST00000472892 ZNF821O75541 412 aaPredicted RBP15.64■□□□□ 0.09
VTI1A-203ENST00000472892 ZMPSTE24O75844 475 aa15.64■□□□□ 0.09
VTI1A-203ENST00000472892 GLDCP23378 1020 aa15.64■□□□□ 0.09
VTI1A-203ENST00000472892 MAT2AP31153 395 aaKnown RBP15.64■□□□□ 0.09
VTI1A-203ENST00000472892 ADRA1BP35368 520 aa15.64■□□□□ 0.09
VTI1A-203ENST00000472892 STAT1P42224 750 aa15.64■□□□□ 0.09
VTI1A-203ENST00000472892 RXRGP48443 463 aa15.64■□□□□ 0.09
VTI1A-203ENST00000472892 ATP11AP98196 1134 aa15.64■□□□□ 0.09
VTI1A-203ENST00000472892 NRG1Q02297 640 aaPredicted RBP15.64■□□□□ 0.09
VTI1A-203ENST00000472892 CCDC15Q0P6D6 951 aa15.64■□□□□ 0.09
VTI1A-203ENST00000472892 SCAPQ12770 1279 aa15.64■□□□□ 0.09
VTI1A-203ENST00000472892 OVGP1Q12889 678 aa15.64■□□□□ 0.09
VTI1A-203ENST00000472892 RAB6CQ53S08 254 aa15.64■□□□□ 0.09
VTI1A-203ENST00000472892 PIP5KL1Q5T9C9 394 aa15.64■□□□□ 0.09
VTI1A-203ENST00000472892 RETSATQ6NUM9 610 aa15.64■□□□□ 0.09
VTI1A-203ENST00000472892 NEK5Q6P3R8 708 aa15.64■□□□□ 0.09
VTI1A-203ENST00000472892 LINGO4Q6UY18 593 aa15.64■□□□□ 0.09
VTI1A-203ENST00000472892 TRIM72Q6ZMU5 477 aa15.64■□□□□ 0.09
VTI1A-203ENST00000472892 IQCHQ86VS3 1027 aa15.64■□□□□ 0.09
VTI1A-203ENST00000472892 SPATS2Q86XZ4 545 aaKnown RBP15.64■□□□□ 0.09
VTI1A-203ENST00000472892 GATAD2AQ86YP4 633 aa15.64■□□□□ 0.09
VTI1A-203ENST00000472892 OR7D4Q8NG98 312 aa15.64■□□□□ 0.09
VTI1A-203ENST00000472892 SLC30A5Q8TAD4 765 aa15.64■□□□□ 0.09
VTI1A-203ENST00000472892 RXFP2Q8WXD0 754 aa15.64■□□□□ 0.09
VTI1A-203ENST00000472892 PCDHB18PQ96TA0 734 aa15.64■□□□□ 0.09
VTI1A-203ENST00000472892 RAB6CQ9H0N0 254 aa15.64■□□□□ 0.09
VTI1A-203ENST00000472892 OSBPL2Q9H1P3 480 aa15.64■□□□□ 0.09
VTI1A-203ENST00000472892 RETREG1Q9H6L5 497 aa15.64■□□□□ 0.09
VTI1A-203ENST00000472892 NYNRINQ9P2P1 1898 aaKnown RBP15.64■□□□□ 0.09
VTI1A-203ENST00000472892 LIMA1Q9UHB6 759 aaKnown RBP15.64■□□□□ 0.09
VTI1A-203ENST00000472892 CXorf51AA0A1B0GTR3 108 aa15.63■□□□□ 0.09
VTI1A-203ENST00000472892 C2CD4BA6NLJ0 364 aa15.63■□□□□ 0.09
VTI1A-203ENST00000472892 GOLGA8CPA6NN73 597 aa15.63■□□□□ 0.09
VTI1A-203ENST00000472892 PRAMEF26H0Y7S4 382 aa15.63■□□□□ 0.09
VTI1A-203ENST00000472892 RNF103O00237 685 aa15.63■□□□□ 0.09
VTI1A-203ENST00000472892 CBX4O00257 560 aa15.63■□□□□ 0.09
VTI1A-203ENST00000472892 MAGEC1O60732 1142 aa15.63■□□□□ 0.09
VTI1A-203ENST00000472892 RNGTTO60942 597 aaKnown RBP15.63■□□□□ 0.09
VTI1A-203ENST00000472892 PRNPP04156 253 aa15.63■□□□□ 0.09
VTI1A-203ENST00000472892 ITGAVP06756 1048 aa15.63■□□□□ 0.09
VTI1A-203ENST00000472892 SDC4P31431 198 aa15.63■□□□□ 0.09
VTI1A-203ENST00000472892 PTPN9P43378 593 aa15.63■□□□□ 0.09
VTI1A-203ENST00000472892 ARRB1P49407 418 aaPredicted RBP15.63■□□□□ 0.09
VTI1A-203ENST00000472892 COPB1P53618 953 aaKnown RBP15.63■□□□□ 0.09
VTI1A-203ENST00000472892 GNA12Q03113 381 aa15.63■□□□□ 0.09
VTI1A-203ENST00000472892 PTP4A2Q12974 167 aa15.63■□□□□ 0.09
VTI1A-203ENST00000472892 STAT4Q14765 748 aa15.63■□□□□ 0.09
VTI1A-203ENST00000472892 SYCP1Q15431 976 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms