RNA–Protein interactions for RNA: ENST00000471567.1

SDC3-203, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 589 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-203ENST00000471567 STK40Q8N2I9 435 aa15.61■□□□□ 0.09
SDC3-203ENST00000471567 TXLNBQ8N3L3 684 aa15.61■□□□□ 0.09
SDC3-203ENST00000471567 FAM160A2Q8N612 972 aaPredicted RBP15.61■□□□□ 0.09
SDC3-203ENST00000471567 KCTD6Q8NC69 237 aa15.61■□□□□ 0.09
SDC3-203ENST00000471567 CASKIN2Q8WXE0 1202 aa15.61■□□□□ 0.09
SDC3-203ENST00000471567 OR8D1Q8WZ84 308 aa15.61■□□□□ 0.09
SDC3-203ENST00000471567 ISG20Q96AZ6 181 aaKnown RBP15.61■□□□□ 0.09
SDC3-203ENST00000471567 HMCESQ96FZ2 354 aa15.61■□□□□ 0.09
SDC3-203ENST00000471567 CCDC114Q96M63 670 aa15.61■□□□□ 0.09
SDC3-203ENST00000471567 CSPG4P5Q96PW8 444 aa15.61■□□□□ 0.09
SDC3-203ENST00000471567 KLC2Q9H0B6 622 aa15.61■□□□□ 0.09
SDC3-203ENST00000471567 MBD1Q9UIS9 605 aaPredicted RBP15.61■□□□□ 0.09
SDC3-203ENST00000471567 CYP8B1Q9UNU6 501 aa15.61■□□□□ 0.09
SDC3-203ENST00000471567 REXO2Q9Y3B8 237 aaKnown RBP15.61■□□□□ 0.09
SDC3-203ENST00000471567 FARP1Q9Y4F1 1045 aaPredicted RBP15.61■□□□□ 0.09
SDC3-203ENST00000471567 PLXND1Q9Y4D7 1925 aa15.6■□□□□ 0.09
SDC3-203ENST00000471567 ARHGAP42A6NI28 874 aa15.6■□□□□ 0.09
SDC3-203ENST00000471567 K7ERQ8 282 aa15.6■□□□□ 0.09
SDC3-203ENST00000471567 MCF2LO15068 1137 aa15.6■□□□□ 0.09
SDC3-203ENST00000471567 PJA2O43164 708 aa15.6■□□□□ 0.09
SDC3-203ENST00000471567 SMAD6O43541 496 aaKnown RBP15.6■□□□□ 0.09
SDC3-203ENST00000471567 GFRA3O60609 400 aa15.6■□□□□ 0.09
SDC3-203ENST00000471567 CD160O95971 181 aa15.6■□□□□ 0.09
SDC3-203ENST00000471567 DNTTP04053 509 aa15.6■□□□□ 0.09
SDC3-203ENST00000471567 RETP07949 1114 aa15.6■□□□□ 0.09
SDC3-203ENST00000471567 VAV1P15498 845 aa15.6■□□□□ 0.09
SDC3-203ENST00000471567 BCKDHBP21953 392 aa15.6■□□□□ 0.09
SDC3-203ENST00000471567 CD6P30203 668 aa15.6■□□□□ 0.09
SDC3-203ENST00000471567 MRE11P49959 708 aa15.6■□□□□ 0.09
SDC3-203ENST00000471567 TPMTP51580 245 aa15.6■□□□□ 0.09
SDC3-203ENST00000471567 VAV2P52735 878 aa15.6■□□□□ 0.09
SDC3-203ENST00000471567 TTC31Q49AM3 519 aaPredicted RBP15.6■□□□□ 0.09
SDC3-203ENST00000471567 ATP13A4Q4VNC1 1196 aa15.6■□□□□ 0.09
SDC3-203ENST00000471567 INO80DQ53TQ3 878 aaPredicted RBP15.6■□□□□ 0.09
SDC3-203ENST00000471567 C22orf39Q6P5X5 142 aa15.6■□□□□ 0.09
SDC3-203ENST00000471567 Q6ZVU0 165 aa15.6■□□□□ 0.09
SDC3-203ENST00000471567 USP30Q70CQ3 517 aa15.6■□□□□ 0.09
SDC3-203ENST00000471567 LPCAT2Q7L5N7 544 aa15.6■□□□□ 0.09
SDC3-203ENST00000471567 ZNF354CQ86Y25 554 aa15.6■□□□□ 0.09
SDC3-203ENST00000471567 PLPP6Q8IY26 295 aa15.6■□□□□ 0.09
SDC3-203ENST00000471567 PCDH20Q8N6Y1 951 aaKnown RBP15.6■□□□□ 0.09
SDC3-203ENST00000471567 RUBCNQ92622 972 aa15.6■□□□□ 0.09
SDC3-203ENST00000471567 SLC39A8Q9C0K1 460 aa15.6■□□□□ 0.09
SDC3-203ENST00000471567 PABPC3Q9H361 631 aaKnown RBP15.6■□□□□ 0.09
SDC3-203ENST00000471567 GMEB2Q9UKD1 530 aa15.6■□□□□ 0.09
SDC3-203ENST00000471567 RCCD1A6NED2 376 aa15.59■□□□□ 0.09
SDC3-203ENST00000471567 BUB1O43683 1085 aa15.59■□□□□ 0.09
SDC3-203ENST00000471567 BUB1BO60566 1050 aaPredicted RBP15.59■□□□□ 0.09
SDC3-203ENST00000471567 ADH1BP00325 375 aa15.59■□□□□ 0.09
SDC3-203ENST00000471567 C5AR1P21730 350 aa15.59■□□□□ 0.09
SDC3-203ENST00000471567 AMPD1P23109 780 aa15.59■□□□□ 0.09
SDC3-203ENST00000471567 IL4RP24394 825 aa15.59■□□□□ 0.09
SDC3-203ENST00000471567 GJC1P36383 396 aa15.59■□□□□ 0.09
SDC3-203ENST00000471567 RECQLP46063 649 aaPredicted RBP15.59■□□□□ 0.09
SDC3-203ENST00000471567 DPYSL3Q14195 570 aa15.59■□□□□ 0.09
SDC3-203ENST00000471567 CST6Q15828 149 aa15.59■□□□□ 0.09
SDC3-203ENST00000471567 LPAL2Q16609 132 aa15.59■□□□□ 0.09
SDC3-203ENST00000471567 FAM46CQ5VWP2 391 aa15.59■□□□□ 0.09
SDC3-203ENST00000471567 C11orf63Q6NUN7 778 aa15.59■□□□□ 0.09
SDC3-203ENST00000471567 TMCO3Q6UWJ1 677 aa15.59■□□□□ 0.09
SDC3-203ENST00000471567 VSIG1Q86XK7 387 aa15.59■□□□□ 0.09
SDC3-203ENST00000471567 MMAAQ8IVH4 418 aaKnown RBP15.59■□□□□ 0.09
SDC3-203ENST00000471567 ARHGAP12Q8IWW6 846 aa15.59■□□□□ 0.09
SDC3-203ENST00000471567 RHOT1Q8IXI2 618 aa15.59■□□□□ 0.09
SDC3-203ENST00000471567 FRMD1Q8N878 549 aa15.59■□□□□ 0.09
SDC3-203ENST00000471567 ACRBPQ8NEB7 543 aa15.59■□□□□ 0.09
SDC3-203ENST00000471567 CCDC112Q8NEF3 446 aa15.59■□□□□ 0.09
SDC3-203ENST00000471567 OR2A12Q8NGT7 310 aa15.59■□□□□ 0.09
SDC3-203ENST00000471567 ZNF670Q9BS34 389 aa15.59■□□□□ 0.09
SDC3-203ENST00000471567 WSB2Q9NYS7 404 aaPredicted RBP15.59■□□□□ 0.09
SDC3-203ENST00000471567 NCDNQ9UBB6 729 aa15.59■□□□□ 0.09
SDC3-203ENST00000471567 TFR2Q9UP52 801 aa15.59■□□□□ 0.09
SDC3-203ENST00000471567 NCKAP1Q9Y2A7 1128 aa15.59■□□□□ 0.09
SDC3-203ENST00000471567 PCDHGA5Q9Y5G8 931 aa15.59■□□□□ 0.09
SDC3-203ENST00000471567 ALG6Q9Y672 507 aa15.59■□□□□ 0.09
SDC3-203ENST00000471567 ZFHX2Q9C0A1 2572 aaPredicted RBP15.59■□□□□ 0.09
SDC3-203ENST00000471567 SPAG17Q6Q759 2223 aa15.59■□□□□ 0.09
SDC3-203ENST00000471567 GPR179Q6PRD1 2367 aa15.58■□□□□ 0.09
SDC3-203ENST00000471567 PIEZO1Q92508 2521 aa15.58■□□□□ 0.09
SDC3-203ENST00000471567 ZNF487B1APH4 448 aa15.58■□□□□ 0.08
SDC3-203ENST00000471567 SPOPO43791 374 aa15.58■□□□□ 0.08
SDC3-203ENST00000471567 NDUFS2O75306 463 aa15.58■□□□□ 0.08
SDC3-203ENST00000471567 ZNF821O75541 412 aaPredicted RBP15.58■□□□□ 0.08
SDC3-203ENST00000471567 EPN2O95208 641 aa15.58■□□□□ 0.08
SDC3-203ENST00000471567 COMTP21964 271 aa15.58■□□□□ 0.08
SDC3-203ENST00000471567 KDELR1P24390 212 aa15.58■□□□□ 0.08
SDC3-203ENST00000471567 SLC8A1P32418 973 aa15.58■□□□□ 0.08
SDC3-203ENST00000471567 SERPINB6P35237 376 aa15.58■□□□□ 0.08
SDC3-203ENST00000471567 PAPOLAP51003 745 aaKnown RBP15.58■□□□□ 0.08
SDC3-203ENST00000471567 CARD16Q5EG05 197 aa15.58■□□□□ 0.08
SDC3-203ENST00000471567 ZFYVE27Q5T4F4 411 aa15.58■□□□□ 0.08
SDC3-203ENST00000471567 KIAA1328Q86T90 577 aa15.58■□□□□ 0.08
SDC3-203ENST00000471567 ALYREFQ86V81 257 aaKnown RBP15.58■□□□□ 0.08
SDC3-203ENST00000471567 NPWQ8N729 165 aa15.58■□□□□ 0.08
SDC3-203ENST00000471567 TMIEQ8NEW7 156 aa15.58■□□□□ 0.08
SDC3-203ENST00000471567 FAF2Q96CS3 445 aa15.58■□□□□ 0.08
SDC3-203ENST00000471567 TOE1Q96GM8 510 aaKnown RBP15.58■□□□□ 0.08
SDC3-203ENST00000471567 CELF6Q96J87 481 aaKnown RBP15.58■□□□□ 0.08
SDC3-203ENST00000471567 CALN1Q9BXU9 219 aa15.58■□□□□ 0.08
SDC3-203ENST00000471567 PCED1AQ9H1Q7 454 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms