RNA–Protein interactions for RNA: ENST00000471215.1

BUD23-215, Transcript of BUD23, rRNA methyltransferase and ribosome maturation factor, human

TSL 2

Gene BUD23, Length 3,886 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BUD23-215	ENST00000471215		F8W8V4	182 aa		10.09	□□□□□ -0.79
BUD23-215	ENST00000471215	TK2	O00142	265 aa		10.09	□□□□□ -0.79
BUD23-215	ENST00000471215	ANXA9	O76027	345 aa		10.09	□□□□□ -0.79
BUD23-215	ENST00000471215	PGK1	P00558	417 aa		10.09	□□□□□ -0.79
BUD23-215	ENST00000471215	HOXD8	P13378	290 aa	Predicted RBP	10.09	□□□□□ -0.79
BUD23-215	ENST00000471215	PAM	P19021	973 aa		10.09	□□□□□ -0.79
BUD23-215	ENST00000471215	RPL34	P49207	117 aa	Known RBP	10.09	□□□□□ -0.79
BUD23-215	ENST00000471215	NUDT2	P50583	147 aa		10.09	□□□□□ -0.79
BUD23-215	ENST00000471215	ATXN3	P54252	364 aa	Predicted RBP	10.09	□□□□□ -0.79
BUD23-215	ENST00000471215	HUNK	P57058	714 aa		10.09	□□□□□ -0.79
BUD23-215	ENST00000471215	UGP2	Q16851	508 aa		10.09	□□□□□ -0.79
BUD23-215	ENST00000471215	SEL1L3	Q68CR1	1132 aa		10.09	□□□□□ -0.79
BUD23-215	ENST00000471215	SCAMP5	Q8TAC9	235 aa		10.09	□□□□□ -0.79
BUD23-215	ENST00000471215	UCMA	Q8WVF2	138 aa		10.09	□□□□□ -0.79
BUD23-215	ENST00000471215	ZNF778	Q96MU6	729 aa		10.09	□□□□□ -0.79
BUD23-215	ENST00000471215	PPP1R10	Q96QC0	940 aa	Known RBP	10.09	□□□□□ -0.79
BUD23-215	ENST00000471215	OMD	Q99983	421 aa		10.09	□□□□□ -0.79
BUD23-215	ENST00000471215	GATA5	Q9BWX5	397 aa	Predicted RBP	10.09	□□□□□ -0.79
BUD23-215	ENST00000471215	CDH19	Q9H159	772 aa		10.09	□□□□□ -0.79
BUD23-215	ENST00000471215	DMAP1	Q9NPF5	467 aa	Predicted RBP	10.09	□□□□□ -0.79
BUD23-215	ENST00000471215	CASS4	Q9NQ75	786 aa		10.09	□□□□□ -0.79
BUD23-215	ENST00000471215	CHST12	Q9NRB3	414 aa		10.09	□□□□□ -0.79
BUD23-215	ENST00000471215	NSMCE4A	Q9NXX6	385 aa		10.09	□□□□□ -0.79
BUD23-215	ENST00000471215	FLRT1	Q9NZU1	646 aa		10.09	□□□□□ -0.79
BUD23-215	ENST00000471215	CORO1C	Q9ULV4	474 aa	Predicted RBP	10.09	□□□□□ -0.79
BUD23-215	ENST00000471215	WDR90	Q96KV7	1748 aa		10.09	□□□□□ -0.79
BUD23-215	ENST00000471215	FKBP6	O75344	327 aa		10.08	□□□□□ -0.8
BUD23-215	ENST00000471215	SMNDC1	O75940	238 aa	Known RBP eCLIP	10.08	□□□□□ -0.8
BUD23-215	ENST00000471215	AOC1	P19801	751 aa		10.08	□□□□□ -0.8
BUD23-215	ENST00000471215	MPST	P25325	297 aa		10.08	□□□□□ -0.8
BUD23-215	ENST00000471215	EPHA3	P29320	983 aa		10.08	□□□□□ -0.8
BUD23-215	ENST00000471215	GRIA4	P48058	902 aa		10.08	□□□□□ -0.8
BUD23-215	ENST00000471215	ACTR3	P61158	418 aa		10.08	□□□□□ -0.8
BUD23-215	ENST00000471215	DSG1	Q02413	1049 aa		10.08	□□□□□ -0.8
BUD23-215	ENST00000471215	IRGC	Q6NXR0	463 aa		10.08	□□□□□ -0.8
BUD23-215	ENST00000471215	DQX1	Q8TE96	717 aa	Known RBP	10.08	□□□□□ -0.8
BUD23-215	ENST00000471215	NRG4	Q8WWG1	115 aa		10.08	□□□□□ -0.8
BUD23-215	ENST00000471215	NT5C3B	Q969T7	300 aa		10.08	□□□□□ -0.8
BUD23-215	ENST00000471215	HDAC11	Q96DB2	347 aa		10.08	□□□□□ -0.8
BUD23-215	ENST00000471215	TBL1Y	Q9BQ87	522 aa		10.08	□□□□□ -0.8
BUD23-215	ENST00000471215	MLPH	Q9BV36	600 aa	Predicted RBP	10.08	□□□□□ -0.8
BUD23-215	ENST00000471215	VCX3B	Q9H321	246 aa		10.08	□□□□□ -0.8
BUD23-215	ENST00000471215	CATSPERB	Q9H7T0	1116 aa		10.08	□□□□□ -0.8
BUD23-215	ENST00000471215	DNAJC28	Q9NX36	388 aa		10.08	□□□□□ -0.8
BUD23-215	ENST00000471215	SSX2IP	Q9Y2D8	614 aa		10.08	□□□□□ -0.8
BUD23-215	ENST00000471215	RAD54B	Q9Y620	910 aa		10.08	□□□□□ -0.8
BUD23-215	ENST00000471215	GABRD	O14764	452 aa		10.08	□□□□□ -0.8
BUD23-215	ENST00000471215	GPR182	O15218	404 aa		10.08	□□□□□ -0.8
BUD23-215	ENST00000471215	MSI1	O43347	362 aa	Known RBP	10.08	□□□□□ -0.8
BUD23-215	ENST00000471215	APOA4	P06727	396 aa		10.08	□□□□□ -0.8
BUD23-215	ENST00000471215	MYL4	P12829	197 aa		10.08	□□□□□ -0.8
BUD23-215	ENST00000471215	COX4I1	P13073	169 aa		10.08	□□□□□ -0.8
BUD23-215	ENST00000471215	ENO3	P13929	434 aa	Predicted RBP	10.08	□□□□□ -0.8
BUD23-215	ENST00000471215	STMN1	P16949	149 aa		10.08	□□□□□ -0.8
BUD23-215	ENST00000471215	CD68	P34810	354 aa	Predicted RBP	10.08	□□□□□ -0.8
BUD23-215	ENST00000471215	RGS2	P41220	211 aa		10.08	□□□□□ -0.8
BUD23-215	ENST00000471215	CSE1L	P55060	971 aa	Known RBP	10.08	□□□□□ -0.8
BUD23-215	ENST00000471215	CDK18	Q07002	472 aa		10.08	□□□□□ -0.8
BUD23-215	ENST00000471215	TRIP10	Q15642	601 aa		10.08	□□□□□ -0.8
BUD23-215	ENST00000471215	SLC9B1	Q4ZJI4	515 aa		10.08	□□□□□ -0.8
BUD23-215	ENST00000471215	OVOS1	Q6IE37	1185 aa		10.08	□□□□□ -0.8
BUD23-215	ENST00000471215	DCLRE1A	Q6PJP8	1040 aa		10.08	□□□□□ -0.8
BUD23-215	ENST00000471215	TMEM135	Q86UB9	458 aa		10.08	□□□□□ -0.8
BUD23-215	ENST00000471215	PHTF2	Q8N3S3	785 aa		10.08	□□□□□ -0.8
BUD23-215	ENST00000471215	ZMIZ2	Q8NF64	920 aa		10.08	□□□□□ -0.8
BUD23-215	ENST00000471215	OR6P1	Q8NGX9	317 aa		10.08	□□□□□ -0.8
BUD23-215	ENST00000471215	PCDHB12	Q9Y5F1	795 aa		10.08	□□□□□ -0.8
BUD23-215	ENST00000471215	SF3B1	O75533	1304 aa	Known RBP eCLIP	10.08	□□□□□ -0.8
BUD23-215	ENST00000471215	DDHD2	O94830	711 aa		10.08	□□□□□ -0.8
BUD23-215	ENST00000471215	CHRNG	P07510	517 aa		10.08	□□□□□ -0.8
BUD23-215	ENST00000471215	TUB	P50607	506 aa		10.08	□□□□□ -0.8
BUD23-215	ENST00000471215	SLC12A1	Q13621	1099 aa		10.08	□□□□□ -0.8
BUD23-215	ENST00000471215	CNGA3	Q16281	694 aa		10.08	□□□□□ -0.8
BUD23-215	ENST00000471215	EML3	Q32P44	896 aa		10.08	□□□□□ -0.8
BUD23-215	ENST00000471215	PCID2	Q5JVF3	399 aa		10.08	□□□□□ -0.8
BUD23-215	ENST00000471215	FAM91A1	Q658Y4	838 aa		10.08	□□□□□ -0.8
BUD23-215	ENST00000471215	ARHGAP36	Q6ZRI8	547 aa		10.08	□□□□□ -0.8
BUD23-215	ENST00000471215	TMC7	Q7Z402	723 aa		10.08	□□□□□ -0.8
BUD23-215	ENST00000471215	HPS6	Q86YV9	775 aa		10.08	□□□□□ -0.8
BUD23-215	ENST00000471215	PABPC5	Q96DU9	382 aa	Known RBP	10.08	□□□□□ -0.8
BUD23-215	ENST00000471215	SERPINI1	Q99574	410 aa		10.08	□□□□□ -0.8
BUD23-215	ENST00000471215	ABI2	Q9NYB9	513 aa	Predicted RBP	10.08	□□□□□ -0.8
BUD23-215	ENST00000471215	NUP205	Q92621	2012 aa		10.08	□□□□□ -0.8
BUD23-215	ENST00000471215	ZCWPW2	A0A1B0GU75	182 aa		10.08	□□□□□ -0.8
BUD23-215	ENST00000471215	GPC4	O75487	556 aa		10.08	□□□□□ -0.8
BUD23-215	ENST00000471215	ZNF865	P0CJ78	1059 aa	Predicted RBP	10.08	□□□□□ -0.8
BUD23-215	ENST00000471215	CCR1	P32246	355 aa		10.08	□□□□□ -0.8
BUD23-215	ENST00000471215	HCAR3	P49019	387 aa		10.08	□□□□□ -0.8
BUD23-215	ENST00000471215	ZNF157	P51786	506 aa	Predicted RBP	10.08	□□□□□ -0.8
BUD23-215	ENST00000471215	ARPP19	P56211	112 aa		10.08	□□□□□ -0.8
BUD23-215	ENST00000471215	ZNF460	Q14592	562 aa		10.08	□□□□□ -0.8
BUD23-215	ENST00000471215	GEN1	Q17RS7	908 aa		10.08	□□□□□ -0.8
BUD23-215	ENST00000471215	DENND6A	Q8IWF6	608 aa		10.08	□□□□□ -0.8
BUD23-215	ENST00000471215	GABPB2	Q8TAK5	448 aa	Predicted RBP	10.08	□□□□□ -0.8
BUD23-215	ENST00000471215	CATSPER2	Q96P56	530 aa		10.08	□□□□□ -0.8
BUD23-215	ENST00000471215	SORT1	Q99523	831 aa		10.08	□□□□□ -0.8
BUD23-215	ENST00000471215	DDX50	Q9BQ39	737 aa	Known RBP	10.08	□□□□□ -0.8
BUD23-215	ENST00000471215	AMH	P03971	560 aa		10.07	□□□□□ -0.8
BUD23-215	ENST00000471215	THRA	P10827	490 aa		10.07	□□□□□ -0.8
BUD23-215	ENST00000471215	CD52	P31358	61 aa		10.07	□□□□□ -0.8

Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms