RNA–Protein interactions for RNA: ENST00000470652.1

COL9A1-206, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 531 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-206ENST00000470652 TP63Q9H3D4 680 aaPredicted RBP4.59□□□□□ -1.67
COL9A1-206ENST00000470652 SRP68Q9UHB9 627 aaKnown RBP4.59□□□□□ -1.67
COL9A1-206ENST00000470652 IPO11Q9UI26 975 aaKnown RBP4.59□□□□□ -1.67
COL9A1-206ENST00000470652 GOLGB1Q14789 3259 aaKnown RBP4.59□□□□□ -1.68
COL9A1-206ENST00000470652 RGPD3A6NKT7 1758 aaPredicted RBP4.58□□□□□ -1.68
COL9A1-206ENST00000470652 ANKRD36CQ5JPF3 1778 aa4.58□□□□□ -1.68
COL9A1-206ENST00000470652 RGPD4Q7Z3J3 1758 aa4.58□□□□□ -1.68
COL9A1-206ENST00000470652 SCN7AQ01118 1682 aa4.58□□□□□ -1.68
COL9A1-206ENST00000470652 LOC105369274A0A096LPK9 316 aa4.58□□□□□ -1.68
COL9A1-206ENST00000470652 LY6G6EA0A0G2JKS1 128 aa4.58□□□□□ -1.68
COL9A1-206ENST00000470652 LOC102723532A0A0G2JNH3 316 aa4.58□□□□□ -1.68
COL9A1-206ENST00000470652 CCDC194A0A1B0GVG4 234 aa4.58□□□□□ -1.68
COL9A1-206ENST00000470652 NKX2-8O15522 239 aa4.58□□□□□ -1.68
COL9A1-206ENST00000470652 DNPH1O43598 174 aa4.58□□□□□ -1.68
COL9A1-206ENST00000470652 IGKV2-30P06310 120 aa4.58□□□□□ -1.68
COL9A1-206ENST00000470652 CYP19A1P11511 503 aaPredicted RBP4.58□□□□□ -1.68
COL9A1-206ENST00000470652 SERPINB3P29508 390 aa4.58□□□□□ -1.68
COL9A1-206ENST00000470652 CRKLP46109 303 aaKnown RBP4.58□□□□□ -1.68
COL9A1-206ENST00000470652 ME1P48163 572 aa4.58□□□□□ -1.68
COL9A1-206ENST00000470652 RARSP54136 660 aaKnown RBP4.58□□□□□ -1.68
COL9A1-206ENST00000470652 TNFAIP2Q03169 654 aa4.58□□□□□ -1.68
COL9A1-206ENST00000470652 AIMP1Q12904 312 aaKnown RBP4.58□□□□□ -1.68
COL9A1-206ENST00000470652 UBE4AQ14139 1066 aa4.58□□□□□ -1.68
COL9A1-206ENST00000470652 PTK2BQ14289 1009 aa4.58□□□□□ -1.68
COL9A1-206ENST00000470652 BRD3Q15059 726 aa4.58□□□□□ -1.68
COL9A1-206ENST00000470652 ZNF569Q5MCW4 686 aa4.58□□□□□ -1.68
COL9A1-206ENST00000470652 ANKRD40Q6AI12 368 aa4.58□□□□□ -1.68
COL9A1-206ENST00000470652 SLC39A5Q6ZMH5 540 aa4.58□□□□□ -1.68
COL9A1-206ENST00000470652 OR4N4Q8N0Y3 316 aa4.58□□□□□ -1.68
COL9A1-206ENST00000470652 TTC5Q8N0Z6 440 aa4.58□□□□□ -1.68
COL9A1-206ENST00000470652 WIPF2Q8TF74 440 aaPredicted RBP4.58□□□□□ -1.68
COL9A1-206ENST00000470652 REXO5Q96IC2 774 aaKnown RBP4.58□□□□□ -1.68
COL9A1-206ENST00000470652 ZFYVE19Q96K21 471 aa4.58□□□□□ -1.68
COL9A1-206ENST00000470652 GPR78Q96P69 363 aa4.58□□□□□ -1.68
COL9A1-206ENST00000470652 SCNM1Q9BWG6 230 aa4.58□□□□□ -1.68
COL9A1-206ENST00000470652 WDR12Q9GZL7 423 aaKnown RBP4.58□□□□□ -1.68
COL9A1-206ENST00000470652 PAPOLBQ9NRJ5 636 aaKnown RBP4.58□□□□□ -1.68
COL9A1-206ENST00000470652 TMEM45AQ9NWC5 275 aa4.58□□□□□ -1.68
COL9A1-206ENST00000470652 HEY2Q9UBP5 337 aa4.58□□□□□ -1.68
COL9A1-206ENST00000470652 SPEF2Q9C093 1822 aa4.58□□□□□ -1.68
COL9A1-206ENST00000470652 N4BP2Q86UW6 1770 aaPredicted RBP4.58□□□□□ -1.68
COL9A1-206ENST00000470652 ZNF831Q5JPB2 1677 aa4.57□□□□□ -1.68
COL9A1-206ENST00000470652 TNRC6CQ9HCJ0 1690 aaKnown RBP4.57□□□□□ -1.68
COL9A1-206ENST00000470652 ADCY9O60503 1353 aa4.57□□□□□ -1.68
COL9A1-206ENST00000470652 PLEKHG2Q9H7P9 1386 aa4.57□□□□□ -1.68
COL9A1-206ENST00000470652 CACNA1FO60840 1977 aa4.57□□□□□ -1.68
COL9A1-206ENST00000470652 A0A087WV62 115 aa4.57□□□□□ -1.68
COL9A1-206ENST00000470652 C3orf70A6NLC5 250 aaPredicted RBP4.57□□□□□ -1.68
COL9A1-206ENST00000470652 AQP12BA6NM10 295 aa4.57□□□□□ -1.68
COL9A1-206ENST00000470652 F8W810 466 aa4.57□□□□□ -1.68
COL9A1-206ENST00000470652 PRPF4O43172 522 aaKnown RBP eCLIP4.57□□□□□ -1.68
COL9A1-206ENST00000470652 ASNA1O43681 348 aa4.57□□□□□ -1.68
COL9A1-206ENST00000470652 RPP40O75818 363 aaKnown RBP4.57□□□□□ -1.68
COL9A1-206ENST00000470652 LARGE1O95461 756 aa4.57□□□□□ -1.68
COL9A1-206ENST00000470652 RFPL3SP0C7P2 107 aa4.57□□□□□ -1.68
COL9A1-206ENST00000470652 KLRK1P26718 216 aa4.57□□□□□ -1.68
COL9A1-206ENST00000470652 AKT1P31749 480 aa4.57□□□□□ -1.68
COL9A1-206ENST00000470652 IL6STP40189 918 aaPredicted RBP4.57□□□□□ -1.68
COL9A1-206ENST00000470652 POLE2P56282 527 aa4.57□□□□□ -1.68
COL9A1-206ENST00000470652 B4GALNT1Q00973 533 aa4.57□□□□□ -1.68
COL9A1-206ENST00000470652 TLE3Q04726 772 aa4.57□□□□□ -1.68
COL9A1-206ENST00000470652 HLFQ16534 295 aa4.57□□□□□ -1.68
COL9A1-206ENST00000470652 LIPMQ5VYY2 423 aa4.57□□□□□ -1.68
COL9A1-206ENST00000470652 ZNF474Q6S9Z5 364 aaPredicted RBP4.57□□□□□ -1.68
COL9A1-206ENST00000470652 ZNF793Q6ZN11 406 aa4.57□□□□□ -1.68
COL9A1-206ENST00000470652 PIP4P1Q86T03 277 aa4.57□□□□□ -1.68
COL9A1-206ENST00000470652 RHPN2Q8IUC4 686 aa4.57□□□□□ -1.68
COL9A1-206ENST00000470652 ADGRF4Q8IZF3 695 aa4.57□□□□□ -1.68
COL9A1-206ENST00000470652 ARFGAP1Q8N6T3 406 aa4.57□□□□□ -1.68
COL9A1-206ENST00000470652 NRACQ8N912 160 aa4.57□□□□□ -1.68
COL9A1-206ENST00000470652 FAM47BQ8NA70 645 aa4.57□□□□□ -1.68
COL9A1-206ENST00000470652 IGFBPL1Q8WX77 278 aa4.57□□□□□ -1.68
COL9A1-206ENST00000470652 FRAT1Q92837 279 aaPredicted RBP4.57□□□□□ -1.68
COL9A1-206ENST00000470652 EID2BQ96D98 161 aa4.57□□□□□ -1.68
COL9A1-206ENST00000470652 MCRS1Q96EZ8 462 aa4.57□□□□□ -1.68
COL9A1-206ENST00000470652 CCDC134Q9H6E4 229 aa4.57□□□□□ -1.68
COL9A1-206ENST00000470652 MYH16Q9H6N6 1097 aa4.57□□□□□ -1.68
COL9A1-206ENST00000470652 MOV10Q9HCE1 1003 aaKnown RBP4.57□□□□□ -1.68
COL9A1-206ENST00000470652 SMC4Q9NTJ3 1288 aa4.57□□□□□ -1.68
COL9A1-206ENST00000470652 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.57□□□□□ -1.68
COL9A1-206ENST00000470652 HS3ST3B1Q9Y662 390 aa4.57□□□□□ -1.68
COL9A1-206ENST00000470652 CACNA1SQ13698 1873 aa4.57□□□□□ -1.68
COL9A1-206ENST00000470652 LAMB2P55268 1798 aa4.57□□□□□ -1.68
COL9A1-206ENST00000470652 SOS1Q07889 1333 aaPredicted RBP4.56□□□□□ -1.68
COL9A1-206ENST00000470652 DDX60Q8IY21 1712 aaKnown RBP4.56□□□□□ -1.68
COL9A1-206ENST00000470652 ABHD14A-ACY1A0A1B0GW23 586 aa4.56□□□□□ -1.68
COL9A1-206ENST00000470652 LGALS16A8MUM7 142 aa4.56□□□□□ -1.68
COL9A1-206ENST00000470652 PPP6R2O75170 966 aa4.56□□□□□ -1.68
COL9A1-206ENST00000470652 SKAP2O75563 359 aaPredicted RBP4.56□□□□□ -1.68
COL9A1-206ENST00000470652 CNTN5O94779 1100 aa4.56□□□□□ -1.68
COL9A1-206ENST00000470652 ALDOAP04075 364 aaKnown RBP4.56□□□□□ -1.68
COL9A1-206ENST00000470652 CYP3A4P08684 503 aa4.56□□□□□ -1.68
COL9A1-206ENST00000470652 IGFBP2P18065 325 aa4.56□□□□□ -1.68
COL9A1-206ENST00000470652 GPTP24298 496 aa4.56□□□□□ -1.68
COL9A1-206ENST00000470652 SLC37A1P57057 533 aa4.56□□□□□ -1.68
COL9A1-206ENST00000470652 RPL15P61313 204 aaKnown RBP4.56□□□□□ -1.68
COL9A1-206ENST00000470652 MTX1Q13505 466 aa4.56□□□□□ -1.68
COL9A1-206ENST00000470652 PFKFB4Q16877 469 aa4.56□□□□□ -1.68
COL9A1-206ENST00000470652 ZACNQ401N2 412 aa4.56□□□□□ -1.68
COL9A1-206ENST00000470652 TRIM60Q495X7 471 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms