RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 LENG8Q96PV6 779 aaPredicted RBP13.9□□□□□ -0.18
BRCA1-209ENST00000470026 PPP1R10Q96QC0 940 aaKnown RBP13.9□□□□□ -0.18
BRCA1-209ENST00000470026 SMOQ99835 787 aa13.9□□□□□ -0.18
BRCA1-209ENST00000470026 ACE2Q9BYF1 805 aaPredicted RBP13.9□□□□□ -0.18
BRCA1-209ENST00000470026 RHOJQ9H4E5 214 aa13.9□□□□□ -0.18
BRCA1-209ENST00000470026 CYP4F11Q9HBI6 524 aa13.9□□□□□ -0.18
BRCA1-209ENST00000470026 MAN1C1Q9NR34 630 aa13.9□□□□□ -0.18
BRCA1-209ENST00000470026 CHRAC1Q9NRG0 131 aa13.9□□□□□ -0.18
BRCA1-209ENST00000470026 STK39Q9UEW8 545 aa13.9□□□□□ -0.18
BRCA1-209ENST00000470026 HDAC3O15379 428 aa13.9□□□□□ -0.18
BRCA1-209ENST00000470026 COL6A2P12110 1019 aa13.9□□□□□ -0.18
BRCA1-209ENST00000470026 PIK3R1P27986 724 aa13.9□□□□□ -0.18
BRCA1-209ENST00000470026 PEX2P28328 305 aa13.9□□□□□ -0.18
BRCA1-209ENST00000470026 NSUN2Q08J23 767 aaKnown RBP eCLIP13.9□□□□□ -0.18
BRCA1-209ENST00000470026 PEX6Q13608 980 aa13.9□□□□□ -0.18
BRCA1-209ENST00000470026 CFAP157Q5JU67 520 aa13.9□□□□□ -0.18
BRCA1-209ENST00000470026 OGFRL1Q5TC84 451 aaPredicted RBP13.9□□□□□ -0.18
BRCA1-209ENST00000470026 LPCAT4Q643R3 524 aa13.9□□□□□ -0.18
BRCA1-209ENST00000470026 PM20D1Q6GTS8 502 aa13.9□□□□□ -0.18
BRCA1-209ENST00000470026 CNTN4Q8IWV2 1026 aa13.9□□□□□ -0.18
BRCA1-209ENST00000470026 ARHGAP18Q8N392 663 aa13.9□□□□□ -0.18
BRCA1-209ENST00000470026 GDPD5Q8WTR4 605 aa13.9□□□□□ -0.18
BRCA1-209ENST00000470026 ZC3H15Q8WU90 426 aaKnown RBP13.9□□□□□ -0.18
BRCA1-209ENST00000470026 STYXQ8WUJ0 223 aa13.9□□□□□ -0.18
BRCA1-209ENST00000470026 BTBD9Q96Q07 612 aa13.9□□□□□ -0.18
BRCA1-209ENST00000470026 TINF2Q9BSI4 451 aa13.9□□□□□ -0.18
BRCA1-209ENST00000470026 SHCBP1LQ9BZQ2 653 aa13.9□□□□□ -0.18
BRCA1-209ENST00000470026 IARS2Q9NSE4 1012 aaKnown RBP13.9□□□□□ -0.18
BRCA1-209ENST00000470026 C20orf96Q9NUD7 363 aaPredicted RBP13.9□□□□□ -0.18
BRCA1-209ENST00000470026 RGSL1A5PLK6 1076 aa13.89□□□□□ -0.19
BRCA1-209ENST00000470026 HHLA1C9JL84 531 aa13.89□□□□□ -0.19
BRCA1-209ENST00000470026 PSMD3O43242 534 aa13.89□□□□□ -0.19
BRCA1-209ENST00000470026 GRID2O43424 1007 aa13.89□□□□□ -0.19
BRCA1-209ENST00000470026 AP1G1O43747 822 aa13.89□□□□□ -0.19
BRCA1-209ENST00000470026 ATP9BO43861 1147 aa13.89□□□□□ -0.19
BRCA1-209ENST00000470026 F9P00740 461 aa13.89□□□□□ -0.19
BRCA1-209ENST00000470026 CHRNGP07510 517 aa13.89□□□□□ -0.19
BRCA1-209ENST00000470026 RAG1P15918 1043 aa13.89□□□□□ -0.19
BRCA1-209ENST00000470026 NMBRP28336 390 aa13.89□□□□□ -0.19
BRCA1-209ENST00000470026 POLD2P49005 469 aa13.89□□□□□ -0.19
BRCA1-209ENST00000470026 CXCR3P49682 368 aa13.89□□□□□ -0.19
BRCA1-209ENST00000470026 RPL14P50914 215 aaKnown RBP13.89□□□□□ -0.19
BRCA1-209ENST00000470026 CDH17Q12864 832 aa13.89□□□□□ -0.19
BRCA1-209ENST00000470026 GRM3Q14832 879 aa13.89□□□□□ -0.19
BRCA1-209ENST00000470026 HERC3Q15034 1050 aa13.89□□□□□ -0.19
BRCA1-209ENST00000470026 NAPEPLDQ6IQ20 393 aa13.89□□□□□ -0.19
BRCA1-209ENST00000470026 GPRIN1Q7Z2K8 1008 aa13.89□□□□□ -0.19
BRCA1-209ENST00000470026 GPR142Q7Z601 462 aa13.89□□□□□ -0.19
BRCA1-209ENST00000470026 DNAJB3Q8WWF6 145 aa13.89□□□□□ -0.19
BRCA1-209ENST00000470026 NCSTNQ92542 709 aa13.89□□□□□ -0.19
BRCA1-209ENST00000470026 CCDC124Q96CT7 223 aaKnown RBP13.89□□□□□ -0.19
BRCA1-209ENST00000470026 SH3GL3Q99963 347 aa13.89□□□□□ -0.19
BRCA1-209ENST00000470026 DDX50Q9BQ39 737 aaKnown RBP13.89□□□□□ -0.19
BRCA1-209ENST00000470026 COLEC11Q9BWP8 271 aa13.89□□□□□ -0.19
BRCA1-209ENST00000470026 SLCO1B7G3V0H7 640 aa13.88□□□□□ -0.19
BRCA1-209ENST00000470026 HAS3O00219 553 aa13.88□□□□□ -0.19
BRCA1-209ENST00000470026 PDHXO00330 501 aa13.88□□□□□ -0.19
BRCA1-209ENST00000470026 ZMPSTE24O75844 475 aa13.88□□□□□ -0.19
BRCA1-209ENST00000470026 F7P08709 466 aaPredicted RBP13.88□□□□□ -0.19
BRCA1-209ENST00000470026 ZCCHC18P0CG32 403 aa13.88□□□□□ -0.19
BRCA1-209ENST00000470026 VCLP18206 1134 aa13.88□□□□□ -0.19
BRCA1-209ENST00000470026 MPSTP25325 297 aa13.88□□□□□ -0.19
BRCA1-209ENST00000470026 SERPINB6P35237 376 aa13.88□□□□□ -0.19
BRCA1-209ENST00000470026 ABCG1P45844 678 aa13.88□□□□□ -0.19
BRCA1-209ENST00000470026 AQP4P55087 323 aa13.88□□□□□ -0.19
BRCA1-209ENST00000470026 PRKAA1Q13131 559 aa13.88□□□□□ -0.19
BRCA1-209ENST00000470026 LSM12Q3MHD2 195 aaKnown RBP13.88□□□□□ -0.19
BRCA1-209ENST00000470026 ARL13BQ3SXY8 428 aa13.88□□□□□ -0.19
BRCA1-209ENST00000470026 TCHHL1Q5QJ38 904 aaPredicted RBP13.88□□□□□ -0.19
BRCA1-209ENST00000470026 MAP3K21Q5TCX8 1036 aa13.88□□□□□ -0.19
BRCA1-209ENST00000470026 SETD3Q86TU7 594 aaPredicted RBP13.88□□□□□ -0.19
BRCA1-209ENST00000470026 FAM35AQ86V20 835 aa13.88□□□□□ -0.19
BRCA1-209ENST00000470026 TMEM126BQ8IUX1 230 aa13.88□□□□□ -0.19
BRCA1-209ENST00000470026 CCDC117Q8IWD4 279 aaPredicted RBP13.88□□□□□ -0.19
BRCA1-209ENST00000470026 RP9Q8TA86 221 aaKnown RBP13.88□□□□□ -0.19
BRCA1-209ENST00000470026 ADAM32Q8TC27 787 aa13.88□□□□□ -0.19
BRCA1-209ENST00000470026 GBP5Q96PP8 586 aa13.88□□□□□ -0.19
BRCA1-209ENST00000470026 TMEM30AQ9NV96 361 aa13.88□□□□□ -0.19
BRCA1-209ENST00000470026 C6orf203Q9P0P8 240 aaPredicted RBP13.88□□□□□ -0.19
BRCA1-209ENST00000470026 VTI1BQ9UEU0 232 aa13.88□□□□□ -0.19
BRCA1-209ENST00000470026 PSMD13Q9UNM6 376 aa13.88□□□□□ -0.19
BRCA1-209ENST00000470026 GNEQ9Y223 722 aaKnown RBP13.88□□□□□ -0.19
BRCA1-209ENST00000470026 TK2O00142 265 aa13.88□□□□□ -0.19
BRCA1-209ENST00000470026 SLC35E2BP0CK96 405 aa13.88□□□□□ -0.19
BRCA1-209ENST00000470026 CD1EP15812 388 aa13.88□□□□□ -0.19
BRCA1-209ENST00000470026 IGFBP6P24592 240 aaPredicted RBP13.88□□□□□ -0.19
BRCA1-209ENST00000470026 GABRB3P28472 473 aa13.88□□□□□ -0.19
BRCA1-209ENST00000470026 GRIA4P48058 902 aa13.88□□□□□ -0.19
BRCA1-209ENST00000470026 CRYBB1P53674 252 aaPredicted RBP13.88□□□□□ -0.19
BRCA1-209ENST00000470026 MED21Q13503 144 aa13.88□□□□□ -0.19
BRCA1-209ENST00000470026 IRF5Q13568 498 aa13.88□□□□□ -0.19
BRCA1-209ENST00000470026 SEL1L3Q68CR1 1132 aa13.88□□□□□ -0.19
BRCA1-209ENST00000470026 C16orf89Q6UX73 402 aa13.88□□□□□ -0.19
BRCA1-209ENST00000470026 DPP9Q86TI2 863 aa13.88□□□□□ -0.19
BRCA1-209ENST00000470026 LINC00523Q86TU6 105 aa13.88□□□□□ -0.19
BRCA1-209ENST00000470026 LSMEM2Q8N112 164 aa13.88□□□□□ -0.19
BRCA1-209ENST00000470026 CNTD1Q8N815 330 aa13.88□□□□□ -0.19
BRCA1-209ENST00000470026 MS4A4AQ96JQ5 239 aa13.88□□□□□ -0.19
BRCA1-209ENST00000470026 EPAS1Q99814 870 aa13.88□□□□□ -0.19
BRCA1-209ENST00000470026 MED10Q9BTT4 135 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms