RNA–Protein interactions for RNA: ENST00000469511.1

PTPN4-209, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 476 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-209ENST00000469511 PSMD8P48556 350 aa5.48□□□□□ -1.53
PTPN4-209ENST00000469511 CYP2J2P51589 502 aa5.48□□□□□ -1.53
PTPN4-209ENST00000469511 CCR5P51681 352 aa5.48□□□□□ -1.53
PTPN4-209ENST00000469511 ANAPC15P60006 121 aa5.48□□□□□ -1.53
PTPN4-209ENST00000469511 DLG4P78352 724 aa5.48□□□□□ -1.53
PTPN4-209ENST00000469511 FANCCQ00597 558 aa5.48□□□□□ -1.53
PTPN4-209ENST00000469511 ARID5AQ03989 594 aa5.48□□□□□ -1.53
PTPN4-209ENST00000469511 ZBTB16Q05516 673 aa5.48□□□□□ -1.53
PTPN4-209ENST00000469511 CYP24A1Q07973 514 aa5.48□□□□□ -1.53
PTPN4-209ENST00000469511 TBR1Q16650 682 aa5.48□□□□□ -1.53
PTPN4-209ENST00000469511 TTC31Q49AM3 519 aaPredicted RBP5.48□□□□□ -1.53
PTPN4-209ENST00000469511 FSCBQ5H9T9 825 aa5.48□□□□□ -1.53
PTPN4-209ENST00000469511 ARL6IP4Q66PJ3 421 aaKnown RBP5.48□□□□□ -1.53
PTPN4-209ENST00000469511 TBC1D3GQ6DHY5 549 aa5.48□□□□□ -1.53
PTPN4-209ENST00000469511 TBC1D3CQ6IPX1 549 aa5.48□□□□□ -1.53
PTPN4-209ENST00000469511 KLHDC10Q6PID8 442 aa5.48□□□□□ -1.53
PTPN4-209ENST00000469511 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.48□□□□□ -1.53
PTPN4-209ENST00000469511 USP30Q70CQ3 517 aa5.48□□□□□ -1.53
PTPN4-209ENST00000469511 BHLHA9Q7RTU4 235 aa5.48□□□□□ -1.53
PTPN4-209ENST00000469511 VASH2Q86V25 355 aa5.48□□□□□ -1.53
PTPN4-209ENST00000469511 TBC1D3Q8IZP1 549 aaPredicted RBP5.48□□□□□ -1.53
PTPN4-209ENST00000469511 LSMEM2Q8N112 164 aa5.48□□□□□ -1.53
PTPN4-209ENST00000469511 CRYBG2Q8N1P7 616 aa5.48□□□□□ -1.53
PTPN4-209ENST00000469511 STK40Q8N2I9 435 aa5.48□□□□□ -1.53
PTPN4-209ENST00000469511 CPXM2Q8N436 756 aa5.48□□□□□ -1.53
PTPN4-209ENST00000469511 MFSD2AQ8NA29 543 aa5.48□□□□□ -1.53
PTPN4-209ENST00000469511 FAM184AQ8NB25 1140 aa5.48□□□□□ -1.53
PTPN4-209ENST00000469511 OR4C6Q8NH72 309 aa5.48□□□□□ -1.53
PTPN4-209ENST00000469511 OR14C36Q8NHC7 312 aa5.48□□□□□ -1.53
PTPN4-209ENST00000469511 PTPRN2Q92932 1015 aa5.48□□□□□ -1.53
PTPN4-209ENST00000469511 PLD4Q96BZ4 506 aa5.48□□□□□ -1.53
PTPN4-209ENST00000469511 CLIC6Q96NY7 704 aa5.48□□□□□ -1.53
PTPN4-209ENST00000469511 DEPDC7Q96QD5 511 aa5.48□□□□□ -1.53
PTPN4-209ENST00000469511 CCNL2Q96S94 520 aaPredicted RBP5.48□□□□□ -1.53
PTPN4-209ENST00000469511 LLPHQ9BRT6 129 aaKnown RBP5.48□□□□□ -1.53
PTPN4-209ENST00000469511 SLC2A11Q9BYW1 496 aa5.48□□□□□ -1.53
PTPN4-209ENST00000469511 EPN3Q9H201 632 aa5.48□□□□□ -1.53
PTPN4-209ENST00000469511 FBXO44Q9H4M3 255 aa5.48□□□□□ -1.53
PTPN4-209ENST00000469511 FZD3Q9NPG1 666 aa5.48□□□□□ -1.53
PTPN4-209ENST00000469511 SEL1LQ9UBV2 794 aa5.48□□□□□ -1.53
PTPN4-209ENST00000469511 SFMBT1Q9UHJ3 866 aa5.48□□□□□ -1.53
PTPN4-209ENST00000469511 GGA2Q9UJY4 613 aa5.48□□□□□ -1.53
PTPN4-209ENST00000469511 SARDHQ9UL12 918 aa5.48□□□□□ -1.53
PTPN4-209ENST00000469511 PLA2G4CQ9UP65 541 aa5.48□□□□□ -1.53
PTPN4-209ENST00000469511 LIMCH1Q9UPQ0 1083 aa5.48□□□□□ -1.53
PTPN4-209ENST00000469511 EXOC7Q9UPT5 735 aa5.48□□□□□ -1.53
PTPN4-209ENST00000469511 NCKAP1Q9Y2A7 1128 aa5.48□□□□□ -1.53
PTPN4-209ENST00000469511 R3HCC1Q9Y3T6 440 aaKnown RBP5.48□□□□□ -1.53
PTPN4-209ENST00000469511 TNRC6AQ8NDV7 1962 aaKnown RBP5.47□□□□□ -1.53
PTPN4-209ENST00000469511 POLQO75417 2590 aa5.47□□□□□ -1.53
PTPN4-209ENST00000469511 RP1L1Q8IWN7 2480 aaPredicted RBP5.47□□□□□ -1.53
PTPN4-209ENST00000469511 FRMD3A2A2Y4 597 aa5.47□□□□□ -1.53
PTPN4-209ENST00000469511 CPED1A4D0V7 1026 aa5.47□□□□□ -1.53
PTPN4-209ENST00000469511 LRRC72A6NJI9 287 aa5.47□□□□□ -1.53
PTPN4-209ENST00000469511 K7ESM1 405 aa5.47□□□□□ -1.53
PTPN4-209ENST00000469511 YKT6O15498 198 aa5.47□□□□□ -1.53
PTPN4-209ENST00000469511 MSI1O43347 362 aaKnown RBP5.47□□□□□ -1.53
PTPN4-209ENST00000469511 PIAS2O75928 621 aa5.47□□□□□ -1.53
PTPN4-209ENST00000469511 KIF20AO95235 890 aa5.47□□□□□ -1.53
PTPN4-209ENST00000469511 C4BPAP04003 597 aaKnown RBP5.47□□□□□ -1.53
PTPN4-209ENST00000469511 CYBBP04839 570 aa5.47□□□□□ -1.53
PTPN4-209ENST00000469511 THEGLP0DJG4 465 aa5.47□□□□□ -1.53
PTPN4-209ENST00000469511 PRLRP16471 622 aa5.47□□□□□ -1.53
PTPN4-209ENST00000469511 POLR2EP19388 210 aaKnown RBP5.47□□□□□ -1.53
PTPN4-209ENST00000469511 RBMS1P29558 406 aaKnown RBP5.47□□□□□ -1.53
PTPN4-209ENST00000469511 CSKP41240 450 aa5.47□□□□□ -1.53
PTPN4-209ENST00000469511 STK19P49842 368 aaPredicted RBP5.47□□□□□ -1.53
PTPN4-209ENST00000469511 CLDN2P57739 230 aa5.47□□□□□ -1.53
PTPN4-209ENST00000469511 COG7P83436 770 aa5.47□□□□□ -1.53
PTPN4-209ENST00000469511 GOLGA8FQ08AF8 430 aa5.47□□□□□ -1.53
PTPN4-209ENST00000469511 GOLGA8DPQ0D2H9 430 aa5.47□□□□□ -1.53
PTPN4-209ENST00000469511 TRPC3Q13507 836 aa5.47□□□□□ -1.53
PTPN4-209ENST00000469511 PSMD6Q15008 389 aa5.47□□□□□ -1.53
PTPN4-209ENST00000469511 SNRNP35Q16560 246 aaKnown RBP5.47□□□□□ -1.53
PTPN4-209ENST00000469511 CDKN3Q16667 212 aa5.47□□□□□ -1.53
PTPN4-209ENST00000469511 BMT2Q1RMZ1 405 aa5.47□□□□□ -1.53
PTPN4-209ENST00000469511 HNRNPA1L2Q32P51 320 aaKnown RBP5.47□□□□□ -1.53
PTPN4-209ENST00000469511 MPPE1Q53F39 396 aa5.47□□□□□ -1.53
PTPN4-209ENST00000469511 RILPL1Q5EBL4 403 aa5.47□□□□□ -1.53
PTPN4-209ENST00000469511 RPS26P11Q5JNZ5 115 aaPredicted RBP5.47□□□□□ -1.53
PTPN4-209ENST00000469511 TPRG1LQ5T0D9 272 aa5.47□□□□□ -1.53
PTPN4-209ENST00000469511 NADSYN1Q6IA69 706 aa5.47□□□□□ -1.53
PTPN4-209ENST00000469511 NAPEPLDQ6IQ20 393 aa5.47□□□□□ -1.53
PTPN4-209ENST00000469511 GUSBP11Q6P575 273 aa5.47□□□□□ -1.53
PTPN4-209ENST00000469511 IGF2-ASQ6U949 168 aa5.47□□□□□ -1.53
PTPN4-209ENST00000469511 USP53Q70EK8 1073 aa5.47□□□□□ -1.53
PTPN4-209ENST00000469511 CCDC186Q7Z3E2 898 aa5.47□□□□□ -1.53
PTPN4-209ENST00000469511 B3GNT8Q7Z7M8 397 aa5.47□□□□□ -1.53
PTPN4-209ENST00000469511 CLEC14AQ86T13 490 aa5.47□□□□□ -1.53
PTPN4-209ENST00000469511 NELFCDQ8IXH7 590 aa5.47□□□□□ -1.53
PTPN4-209ENST00000469511 APCDD1Q8J025 514 aa5.47□□□□□ -1.53
PTPN4-209ENST00000469511 ZNF276Q8N554 614 aa5.47□□□□□ -1.53
PTPN4-209ENST00000469511 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.47□□□□□ -1.53
PTPN4-209ENST00000469511 RASSF8Q8NHQ8 419 aa5.47□□□□□ -1.53
PTPN4-209ENST00000469511 IFI44Q8TCB0 444 aa5.47□□□□□ -1.53
PTPN4-209ENST00000469511 MAPK15Q8TD08 544 aa5.47□□□□□ -1.53
PTPN4-209ENST00000469511 TMA16Q96EY4 203 aaKnown RBP5.47□□□□□ -1.53
PTPN4-209ENST00000469511 CYFIP2Q96F07 1278 aa5.47□□□□□ -1.53
PTPN4-209ENST00000469511 RPL10LQ96L21 214 aaKnown RBP5.47□□□□□ -1.53
PTPN4-209ENST00000469511 AK8Q96MA6 479 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms