RNA–Protein interactions for RNA: ENST00000467733.1

SSR3-204, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 873 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-204ENST00000467733 HOXC13P31276 330 aa4.53□□□□□ -1.68
SSR3-204ENST00000467733 SFNP31947 248 aa4.53□□□□□ -1.68
SSR3-204ENST00000467733 KIR2DL3P43628 341 aa4.53□□□□□ -1.68
SSR3-204ENST00000467733 JAK3P52333 1124 aa4.53□□□□□ -1.68
SSR3-204ENST00000467733 ELAVL2Q12926 359 aaKnown RBP4.53□□□□□ -1.68
SSR3-204ENST00000467733 KARSQ15046 597 aaKnown RBP4.53□□□□□ -1.68
SSR3-204ENST00000467733 UGT8Q16880 541 aa4.53□□□□□ -1.68
SSR3-204ENST00000467733 RNF219Q5W0B1 726 aaPredicted RBP4.53□□□□□ -1.68
SSR3-204ENST00000467733 TMTC3Q6ZXV5 915 aa4.53□□□□□ -1.68
SSR3-204ENST00000467733 SRGAP1Q7Z6B7 1085 aa4.53□□□□□ -1.68
SSR3-204ENST00000467733 RALGPS2Q86X27 583 aaPredicted RBP4.53□□□□□ -1.68
SSR3-204ENST00000467733 MB21D2Q8IYB1 491 aaPredicted RBP4.53□□□□□ -1.68
SSR3-204ENST00000467733 HACE1Q8IYU2 909 aa4.53□□□□□ -1.68
SSR3-204ENST00000467733 CLRN3Q8NCR9 226 aa4.53□□□□□ -1.68
SSR3-204ENST00000467733 OR14C36Q8NHC7 312 aa4.53□□□□□ -1.68
SSR3-204ENST00000467733 NCOA7Q8NI08 942 aa4.53□□□□□ -1.68
SSR3-204ENST00000467733 LNX1Q8TBB1 728 aaPredicted RBP4.53□□□□□ -1.68
SSR3-204ENST00000467733 CSGALNACT1Q8TDX6 532 aa4.53□□□□□ -1.68
SSR3-204ENST00000467733 SMARCD2Q92925 531 aa4.53□□□□□ -1.68
SSR3-204ENST00000467733 JPH2Q9BR39 696 aaPredicted RBP4.53□□□□□ -1.68
SSR3-204ENST00000467733 GLT8D2Q9H1C3 349 aa4.53□□□□□ -1.68
SSR3-204ENST00000467733 MS4A5Q9H3V2 200 aa4.53□□□□□ -1.68
SSR3-204ENST00000467733 MINDY3Q9H8M7 445 aa4.53□□□□□ -1.68
SSR3-204ENST00000467733 TRPV4Q9HBA0 871 aa4.53□□□□□ -1.68
SSR3-204ENST00000467733 TOPORSQ9NS56 1045 aaPredicted RBP4.53□□□□□ -1.68
SSR3-204ENST00000467733 EIF2B4Q9UI10 523 aaKnown RBP4.53□□□□□ -1.68
SSR3-204ENST00000467733 COL4A3BPQ9Y5P4 624 aa4.53□□□□□ -1.68
SSR3-204ENST00000467733 LRRK2Q5S007 2527 aa4.53□□□□□ -1.68
SSR3-204ENST00000467733 OBSL1O75147 1896 aa4.53□□□□□ -1.68
SSR3-204ENST00000467733 DOPEY2Q9Y3R5 2298 aa4.52□□□□□ -1.69
SSR3-204ENST00000467733 UBR5O95071 2799 aaPredicted RBP4.52□□□□□ -1.69
SSR3-204ENST00000467733 CENPVL1A0A0U1RR11 272 aa4.52□□□□□ -1.69
SSR3-204ENST00000467733 TMEM150BA6NC51 233 aa4.52□□□□□ -1.69
SSR3-204ENST00000467733 SLC38A8A6NNN8 435 aa4.52□□□□□ -1.69
SSR3-204ENST00000467733 E7EWF7 191 aa4.52□□□□□ -1.69
SSR3-204ENST00000467733 SPECC1L-ADORA2AF8WAN1 911 aa4.52□□□□□ -1.69
SSR3-204ENST00000467733 hCG_1984214I3L0E3 225 aa4.52□□□□□ -1.69
SSR3-204ENST00000467733 CDX4O14627 284 aaPredicted RBP4.52□□□□□ -1.69
SSR3-204ENST00000467733 ZNF197O14709 1029 aa4.52□□□□□ -1.69
SSR3-204ENST00000467733 CHADO15335 359 aa4.52□□□□□ -1.69
SSR3-204ENST00000467733 GPR39O43194 453 aa4.52□□□□□ -1.69
SSR3-204ENST00000467733 TSPAN1O60635 241 aa4.52□□□□□ -1.69
SSR3-204ENST00000467733 TADA2AO75478 443 aa4.52□□□□□ -1.69
SSR3-204ENST00000467733 RHOBTB1O94844 696 aa4.52□□□□□ -1.69
SSR3-204ENST00000467733 ERLIN2O94905 339 aa4.52□□□□□ -1.69
SSR3-204ENST00000467733 CYP21A2P08686 494 aa4.52□□□□□ -1.69
SSR3-204ENST00000467733 CLEC2LP0C7M8 214 aa4.52□□□□□ -1.69
SSR3-204ENST00000467733 CALM1P0DP23 149 aa4.52□□□□□ -1.69
SSR3-204ENST00000467733 CALM2P0DP24 149 aa4.52□□□□□ -1.69
SSR3-204ENST00000467733 CALM3P0DP25 149 aa4.52□□□□□ -1.69
SSR3-204ENST00000467733 PLA2G2AP14555 144 aa4.52□□□□□ -1.69
SSR3-204ENST00000467733 PTPN2P17706 415 aa4.52□□□□□ -1.69
SSR3-204ENST00000467733 ITGB6P18564 788 aa4.52□□□□□ -1.69
SSR3-204ENST00000467733 HK1P19367 917 aa4.52□□□□□ -1.69
SSR3-204ENST00000467733 AXLP30530 894 aa4.52□□□□□ -1.69
SSR3-204ENST00000467733 OR1D2P34982 312 aa4.52□□□□□ -1.69
SSR3-204ENST00000467733 VIPR2P41587 438 aa4.52□□□□□ -1.69
SSR3-204ENST00000467733 CCR2P41597 374 aa4.52□□□□□ -1.69
SSR3-204ENST00000467733 PXNP49023 591 aaPredicted RBP4.52□□□□□ -1.69
SSR3-204ENST00000467733 SIM1P81133 766 aaPredicted RBP4.52□□□□□ -1.69
SSR3-204ENST00000467733 CREB5Q02930 508 aa4.52□□□□□ -1.69
SSR3-204ENST00000467733 FCHO2Q0JRZ9 810 aa4.52□□□□□ -1.69
SSR3-204ENST00000467733 SCAPQ12770 1279 aa4.52□□□□□ -1.69
SSR3-204ENST00000467733 ERCC6LQ2NKX8 1250 aa4.52□□□□□ -1.69
SSR3-204ENST00000467733 XKR3Q5GH77 459 aa4.52□□□□□ -1.69
SSR3-204ENST00000467733 ANKRD45Q5TZF3 282 aa4.52□□□□□ -1.69
SSR3-204ENST00000467733 FAM171A1Q5VUB5 890 aa4.52□□□□□ -1.69
SSR3-204ENST00000467733 NOTUMQ6P988 496 aa4.52□□□□□ -1.69
SSR3-204ENST00000467733 PDZD4Q76G19 769 aaPredicted RBP4.52□□□□□ -1.69
SSR3-204ENST00000467733 PIP4P1Q86T03 277 aa4.52□□□□□ -1.69
SSR3-204ENST00000467733 CEP57Q86XR8 500 aa4.52□□□□□ -1.69
SSR3-204ENST00000467733 MFSD6LQ8IWD5 586 aa4.52□□□□□ -1.69
SSR3-204ENST00000467733 UNC5BQ8IZJ1 945 aa4.52□□□□□ -1.69
SSR3-204ENST00000467733 ZNF713Q8N859 430 aaPredicted RBP4.52□□□□□ -1.69
SSR3-204ENST00000467733 GLB1L3Q8NCI6 653 aaPredicted RBP4.52□□□□□ -1.69
SSR3-204ENST00000467733 RDM1Q8NG50 284 aa4.52□□□□□ -1.69
SSR3-204ENST00000467733 HASPINQ8TF76 798 aa4.52□□□□□ -1.69
SSR3-204ENST00000467733 TCEAL4Q96EI5 215 aa4.52□□□□□ -1.69
SSR3-204ENST00000467733 AHCYL2Q96HN2 611 aaKnown RBP4.52□□□□□ -1.69
SSR3-204ENST00000467733 RAX2Q96IS3 184 aa4.52□□□□□ -1.69
SSR3-204ENST00000467733 PAAF1Q9BRP4 392 aa4.52□□□□□ -1.69
SSR3-204ENST00000467733 EIF2AQ9BY44 585 aaKnown RBP4.52□□□□□ -1.69
SSR3-204ENST00000467733 IL25Q9H293 177 aa4.52□□□□□ -1.69
SSR3-204ENST00000467733 NXF3Q9H4D5 531 aaKnown RBP4.52□□□□□ -1.69
SSR3-204ENST00000467733 SLC32A1Q9H598 525 aa4.52□□□□□ -1.69
SSR3-204ENST00000467733 MIOSQ9NXC5 875 aa4.52□□□□□ -1.69
SSR3-204ENST00000467733 MTRRQ9UBK8 725 aa4.52□□□□□ -1.69
SSR3-204ENST00000467733 CACNG4Q9UBN1 327 aa4.52□□□□□ -1.69
SSR3-204ENST00000467733 EVLQ9UI08 416 aaPredicted RBP4.52□□□□□ -1.69
SSR3-204ENST00000467733 PRSS50Q9UI38 385 aa4.52□□□□□ -1.69
SSR3-204ENST00000467733 SLC8A2Q9UPR5 921 aa4.52□□□□□ -1.69
SSR3-204ENST00000467733 HES2Q9Y543 173 aa4.52□□□□□ -1.69
SSR3-204ENST00000467733 FLNCQ14315 2725 aa4.52□□□□□ -1.69
SSR3-204ENST00000467733 MUC22E2RYF6 1773 aaPredicted RBP4.52□□□□□ -1.69
SSR3-204ENST00000467733 MYO18AQ92614 2054 aaKnown RBP4.52□□□□□ -1.69
SSR3-204ENST00000467733 CABIN1Q9Y6J0 2220 aa4.52□□□□□ -1.69
SSR3-204ENST00000467733 BOD1L1Q8NFC6 3051 aa4.52□□□□□ -1.69
SSR3-204ENST00000467733 CCDC194A0A1B0GVG4 234 aa4.51□□□□□ -1.69
SSR3-204ENST00000467733 SPAARA0A1B0GVQ0 90 aa4.51□□□□□ -1.69
SSR3-204ENST00000467733 SMCO2A6NFE2 343 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms