RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 KLRB1Q12918 225 aa10.52□□□□□ -0.73
HDAC3-203ENST00000467533 C1orf61Q13536 156 aa10.52□□□□□ -0.73
HDAC3-203ENST00000467533 ZACNQ401N2 412 aa10.52□□□□□ -0.73
HDAC3-203ENST00000467533 PRRT3Q5FWE3 981 aa10.52□□□□□ -0.73
HDAC3-203ENST00000467533 PM20D1Q6GTS8 502 aa10.52□□□□□ -0.73
HDAC3-203ENST00000467533 CAPRIN2Q6IMN6 1127 aaKnown RBP10.52□□□□□ -0.73
HDAC3-203ENST00000467533 Q6ZVU0 165 aa10.52□□□□□ -0.73
HDAC3-203ENST00000467533 SIX6OS1Q8N1H7 587 aa10.52□□□□□ -0.73
HDAC3-203ENST00000467533 ZNF507Q8TCN5 953 aa10.52□□□□□ -0.73
HDAC3-203ENST00000467533 PARD3BQ8TEW8 1205 aa10.52□□□□□ -0.73
HDAC3-203ENST00000467533 FRS2Q8WU20 508 aa10.52□□□□□ -0.73
HDAC3-203ENST00000467533 TMEM159Q96B96 161 aa10.52□□□□□ -0.73
HDAC3-203ENST00000467533 BMFQ96LC9 184 aa10.52□□□□□ -0.73
HDAC3-203ENST00000467533 HEXIM2Q96MH2 286 aaKnown RBP10.52□□□□□ -0.73
HDAC3-203ENST00000467533 SRRTQ9BXP5 876 aaKnown RBP10.52□□□□□ -0.73
HDAC3-203ENST00000467533 UBXN6Q9BZV1 441 aa10.52□□□□□ -0.73
HDAC3-203ENST00000467533 NUCKS1Q9H1E3 243 aaKnown RBP10.52□□□□□ -0.73
HDAC3-203ENST00000467533 LRRC4Q9HBW1 653 aa10.52□□□□□ -0.73
HDAC3-203ENST00000467533 DYRK4Q9NR20 520 aa10.52□□□□□ -0.73
HDAC3-203ENST00000467533 ABCC13Q9NSE7 274 aa10.52□□□□□ -0.73
HDAC3-203ENST00000467533 GULP1Q9UBP9 304 aa10.52□□□□□ -0.73
HDAC3-203ENST00000467533 RABGEF1Q9UJ41 708 aa10.52□□□□□ -0.73
HDAC3-203ENST00000467533 SLC25A13Q9UJS0 675 aa10.52□□□□□ -0.73
HDAC3-203ENST00000467533 PPM1HQ9ULR3 514 aa10.52□□□□□ -0.73
HDAC3-203ENST00000467533 ZFR2Q9UPR6 939 aaKnown RBP10.52□□□□□ -0.73
HDAC3-203ENST00000467533 CRYBG3Q68DQ2 2970 aa10.52□□□□□ -0.73
HDAC3-203ENST00000467533 SDK2Q58EX2 2172 aa10.52□□□□□ -0.73
HDAC3-203ENST00000467533 PRR19A6NJB7 356 aa10.51□□□□□ -0.73
HDAC3-203ENST00000467533 YJEFN3A6XGL0 299 aa10.51□□□□□ -0.73
HDAC3-203ENST00000467533 ZNF891A8MT65 544 aaPredicted RBP10.51□□□□□ -0.73
HDAC3-203ENST00000467533 E7ENQ6 273 aa10.51□□□□□ -0.73
HDAC3-203ENST00000467533 KPNA3O00505 521 aaPredicted RBP10.51□□□□□ -0.73
HDAC3-203ENST00000467533 HLA-DRAP01903 254 aa10.51□□□□□ -0.73
HDAC3-203ENST00000467533 LIFP15018 202 aa10.51□□□□□ -0.73
HDAC3-203ENST00000467533 PDGFRAP16234 1089 aa10.51□□□□□ -0.73
HDAC3-203ENST00000467533 SNRPFP62306 86 aaKnown RBP10.51□□□□□ -0.73
HDAC3-203ENST00000467533 SULT2A1Q06520 285 aa10.51□□□□□ -0.73
HDAC3-203ENST00000467533 CCDC15Q0P6D6 951 aa10.51□□□□□ -0.73
HDAC3-203ENST00000467533 DCAF6Q58WW2 860 aa10.51□□□□□ -0.73
HDAC3-203ENST00000467533 MS4A13Q5J8X5 152 aa10.51□□□□□ -0.73
HDAC3-203ENST00000467533 FAM26FQ5R3K3 315 aa10.51□□□□□ -0.73
HDAC3-203ENST00000467533 TMEM164Q5U3C3 297 aa10.51□□□□□ -0.73
HDAC3-203ENST00000467533 EPM2AIP1Q7L775 607 aaPredicted RBP10.51□□□□□ -0.73
HDAC3-203ENST00000467533 IL22RA1Q8N6P7 574 aa10.51□□□□□ -0.73
HDAC3-203ENST00000467533 EFCAB3Q8N7B9 438 aa10.51□□□□□ -0.73
HDAC3-203ENST00000467533 ARL10Q8N8L6 244 aa10.51□□□□□ -0.73
HDAC3-203ENST00000467533 KYQ8NBH2 561 aa10.51□□□□□ -0.73
HDAC3-203ENST00000467533 ERCC4Q92889 916 aaPredicted RBP10.51□□□□□ -0.73
HDAC3-203ENST00000467533 RNF34Q969K3 372 aa10.51□□□□□ -0.73
HDAC3-203ENST00000467533 ABHD17AQ96GS6 310 aa10.51□□□□□ -0.73
HDAC3-203ENST00000467533 CMKLR1Q99788 373 aa10.51□□□□□ -0.73
HDAC3-203ENST00000467533 LRRC61Q9BV99 259 aa10.51□□□□□ -0.73
HDAC3-203ENST00000467533 TCEAL2Q9H3H9 227 aaPredicted RBP10.51□□□□□ -0.73
HDAC3-203ENST00000467533 CYP3A43Q9HB55 503 aa10.51□□□□□ -0.73
HDAC3-203ENST00000467533 SIRPGQ9P1W8 387 aa10.51□□□□□ -0.73
HDAC3-203ENST00000467533 TFIP11Q9UBB9 837 aaKnown RBP10.51□□□□□ -0.73
HDAC3-203ENST00000467533 DOLKQ9UPQ8 538 aa10.51□□□□□ -0.73
HDAC3-203ENST00000467533 HS3ST3A1Q9Y663 406 aa10.51□□□□□ -0.73
HDAC3-203ENST00000467533 ITPR3Q14573 2671 aa10.51□□□□□ -0.73
HDAC3-203ENST00000467533 A0A087X0B3 334 aa10.5□□□□□ -0.73
HDAC3-203ENST00000467533 A0A1W2PQM1 296 aa10.5□□□□□ -0.73
HDAC3-203ENST00000467533 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.5□□□□□ -0.73
HDAC3-203ENST00000467533 LMO7DNF2Z398 122 aa10.5□□□□□ -0.73
HDAC3-203ENST00000467533 TULP2O00295 520 aa10.5□□□□□ -0.73
HDAC3-203ENST00000467533 FPGTO14772 594 aa10.5□□□□□ -0.73
HDAC3-203ENST00000467533 MCF2LO15068 1137 aa10.5□□□□□ -0.73
HDAC3-203ENST00000467533 SPTLC2O15270 562 aa10.5□□□□□ -0.73
HDAC3-203ENST00000467533 SEMA7AO75326 666 aa10.5□□□□□ -0.73
HDAC3-203ENST00000467533 GCATO75600 419 aa10.5□□□□□ -0.73
HDAC3-203ENST00000467533 CNTN5O94779 1100 aa10.5□□□□□ -0.73
HDAC3-203ENST00000467533 MOCS2O96007 188 aaPredicted RBP10.5□□□□□ -0.73
HDAC3-203ENST00000467533 GJB2P29033 226 aa10.5□□□□□ -0.73
HDAC3-203ENST00000467533 DLG4P78352 724 aa10.5□□□□□ -0.73
HDAC3-203ENST00000467533 CLDN10P78369 228 aa10.5□□□□□ -0.73
HDAC3-203ENST00000467533 C1QBPQ07021 282 aaKnown RBP10.5□□□□□ -0.73
HDAC3-203ENST00000467533 EIF2B5Q13144 721 aaKnown RBP10.5□□□□□ -0.73
HDAC3-203ENST00000467533 SLC12A1Q13621 1099 aa10.5□□□□□ -0.73
HDAC3-203ENST00000467533 TMEM259Q4ZIN3 620 aa10.5□□□□□ -0.73
HDAC3-203ENST00000467533 TPRG1LQ5T0D9 272 aa10.5□□□□□ -0.73
HDAC3-203ENST00000467533 MSANTD2Q6P1R3 559 aa10.5□□□□□ -0.73
HDAC3-203ENST00000467533 MAMDC2Q7Z304 686 aaPredicted RBP10.5□□□□□ -0.73
HDAC3-203ENST00000467533 HEATR4Q86WZ0 1026 aa10.5□□□□□ -0.73
HDAC3-203ENST00000467533 CHSY1Q86X52 802 aa10.5□□□□□ -0.73
HDAC3-203ENST00000467533 C12orf56Q8IXR9 622 aa10.5□□□□□ -0.73
HDAC3-203ENST00000467533 PHACTR4Q8IZ21 702 aa10.5□□□□□ -0.73
HDAC3-203ENST00000467533 LGI2Q8N0V4 545 aa10.5□□□□□ -0.73
HDAC3-203ENST00000467533 TATDN2Q93075 761 aa10.5□□□□□ -0.73
HDAC3-203ENST00000467533 AZIN2Q96A70 460 aa10.5□□□□□ -0.73
HDAC3-203ENST00000467533 PANK2Q9BZ23 570 aa10.5□□□□□ -0.73
HDAC3-203ENST00000467533 SLC13A1Q9BZW2 595 aa10.5□□□□□ -0.73
HDAC3-203ENST00000467533 NIF3L1Q9GZT8 377 aa10.5□□□□□ -0.73
HDAC3-203ENST00000467533 LRRN3Q9H3W5 708 aa10.5□□□□□ -0.73
HDAC3-203ENST00000467533 APOBEC3GQ9HC16 384 aaKnown RBP10.5□□□□□ -0.73
HDAC3-203ENST00000467533 FOXD4L1Q9NU39 408 aa10.5□□□□□ -0.73
HDAC3-203ENST00000467533 CUEDC1Q9NWM3 386 aaPredicted RBP10.5□□□□□ -0.73
HDAC3-203ENST00000467533 FARP1Q9Y4F1 1045 aaPredicted RBP10.5□□□□□ -0.73
HDAC3-203ENST00000467533 ZNF106Q9H2Y7 1883 aaKnown RBP10.5□□□□□ -0.73
HDAC3-203ENST00000467533 SPENQ96T58 3664 aaKnown RBP10.5□□□□□ -0.73
HDAC3-203ENST00000467533 TRPM6Q9BX84 2022 aa10.5□□□□□ -0.73
HDAC3-203ENST00000467533 XPO1O14980 1071 aaKnown RBP10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms