RNA–Protein interactions for RNA: ENST00000467468.5

SMC4-208, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 4

Gene SMC4, Length 566 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-208ENST00000467468 ZNF626Q68DY1 528 aa4.5□□□□□ -1.69
SMC4-208ENST00000467468 LINC01465Q8N7H1 131 aa4.5□□□□□ -1.69
SMC4-208ENST00000467468 MAFAQ8NHW3 353 aaPredicted RBP4.5□□□□□ -1.69
SMC4-208ENST00000467468 DENND1AQ8TEH3 1009 aa4.5□□□□□ -1.69
SMC4-208ENST00000467468 RUFY2Q8WXA3 655 aa4.5□□□□□ -1.69
SMC4-208ENST00000467468 USP6NLQ92738 828 aa4.5□□□□□ -1.69
SMC4-208ENST00000467468 RPL36ALQ969Q0 106 aaKnown RBP4.5□□□□□ -1.69
SMC4-208ENST00000467468 HIC2Q96JB3 615 aa4.5□□□□□ -1.69
SMC4-208ENST00000467468 HTATIP2Q9BUP3 242 aa4.5□□□□□ -1.69
SMC4-208ENST00000467468 ELOVL1Q9BW60 279 aa4.5□□□□□ -1.69
SMC4-208ENST00000467468 C1QTNF7Q9BXJ2 289 aa4.5□□□□□ -1.69
SMC4-208ENST00000467468 RNF26Q9BY78 433 aaPredicted RBP4.5□□□□□ -1.69
SMC4-208ENST00000467468 CTDSP1Q9GZU7 261 aa4.5□□□□□ -1.69
SMC4-208ENST00000467468 RANBP17Q9H2T7 1088 aaKnown RBP4.5□□□□□ -1.69
SMC4-208ENST00000467468 EIF2B3Q9NR50 452 aaKnown RBP4.5□□□□□ -1.69
SMC4-208ENST00000467468 ABHD10Q9NUJ1 306 aa4.5□□□□□ -1.69
SMC4-208ENST00000467468 GAR1Q9NY12 217 aaKnown RBP4.5□□□□□ -1.69
SMC4-208ENST00000467468 ASIC5Q9NY37 505 aa4.5□□□□□ -1.69
SMC4-208ENST00000467468 MTMR4Q9NYA4 1195 aa4.5□□□□□ -1.69
SMC4-208ENST00000467468 TNFRSF18Q9Y5U5 241 aa4.5□□□□□ -1.69
SMC4-208ENST00000467468 TEX22C9J3V5 150 aa4.49□□□□□ -1.69
SMC4-208ENST00000467468 AP3D1O14617 1153 aa4.49□□□□□ -1.69
SMC4-208ENST00000467468 PRAMEF2O60811 474 aa4.49□□□□□ -1.69
SMC4-208ENST00000467468 KAT7O95251 611 aa4.49□□□□□ -1.69
SMC4-208ENST00000467468 LYL1P12980 280 aa4.49□□□□□ -1.69
SMC4-208ENST00000467468 AKR1B1P15121 316 aa4.49□□□□□ -1.69
SMC4-208ENST00000467468 ARSAP15289 507 aa4.49□□□□□ -1.69
SMC4-208ENST00000467468 PORP16435 677 aaPredicted RBP4.49□□□□□ -1.69
SMC4-208ENST00000467468 PRPH2P23942 346 aa4.49□□□□□ -1.69
SMC4-208ENST00000467468 TM4SF1P30408 202 aa4.49□□□□□ -1.69
SMC4-208ENST00000467468 GALNSP34059 522 aa4.49□□□□□ -1.69
SMC4-208ENST00000467468 HNF1BP35680 557 aa4.49□□□□□ -1.69
SMC4-208ENST00000467468 KRT20P35900 424 aa4.49□□□□□ -1.69
SMC4-208ENST00000467468 ARHGAP25P42331 645 aa4.49□□□□□ -1.69
SMC4-208ENST00000467468 MMP13P45452 471 aa4.49□□□□□ -1.69
SMC4-208ENST00000467468 PLCD1P51178 756 aa4.49□□□□□ -1.69
SMC4-208ENST00000467468 RPS6KA3P51812 740 aa4.49□□□□□ -1.69
SMC4-208ENST00000467468 JAK3P52333 1124 aa4.49□□□□□ -1.69
SMC4-208ENST00000467468 RARSP54136 660 aaKnown RBP4.49□□□□□ -1.69
SMC4-208ENST00000467468 GPC5P78333 572 aa4.49□□□□□ -1.69
SMC4-208ENST00000467468 CREB5Q02930 508 aa4.49□□□□□ -1.69
SMC4-208ENST00000467468 DCTN2Q13561 401 aaKnown RBP4.49□□□□□ -1.69
SMC4-208ENST00000467468 NAA25Q14CX7 972 aa4.49□□□□□ -1.69
SMC4-208ENST00000467468 CFAP58Q5T655 872 aa4.49□□□□□ -1.69
SMC4-208ENST00000467468 KLHL24Q6TFL4 600 aa4.49□□□□□ -1.69
SMC4-208ENST00000467468 SLC39A5Q6ZMH5 540 aa4.49□□□□□ -1.69
SMC4-208ENST00000467468 MON1AQ86VX9 555 aa4.49□□□□□ -1.69
SMC4-208ENST00000467468 LAS2Q8IYD9 372 aa4.49□□□□□ -1.69
SMC4-208ENST00000467468 FAM9BQ8IZU0 186 aa4.49□□□□□ -1.69
SMC4-208ENST00000467468 C12orf76Q8N812 135 aaPredicted RBP4.49□□□□□ -1.69
SMC4-208ENST00000467468 ENDOVQ8N8Q3 282 aaKnown RBP4.49□□□□□ -1.69
SMC4-208ENST00000467468 SRFBP1Q8NEF9 429 aaKnown RBP4.49□□□□□ -1.69
SMC4-208ENST00000467468 NOC3LQ8WTT2 800 aaKnown RBP4.49□□□□□ -1.69
SMC4-208ENST00000467468 EDC3Q96F86 508 aaKnown RBP4.49□□□□□ -1.69
SMC4-208ENST00000467468 EYA3Q99504 573 aa4.49□□□□□ -1.69
SMC4-208ENST00000467468 CLSTN3Q9BQT9 956 aa4.49□□□□□ -1.69
SMC4-208ENST00000467468 QTRT1Q9BXR0 403 aaKnown RBP4.49□□□□□ -1.69
SMC4-208ENST00000467468 PRSS22Q9GZN4 317 aa4.49□□□□□ -1.69
SMC4-208ENST00000467468 TTYH1Q9H313 450 aaPredicted RBP4.49□□□□□ -1.69
SMC4-208ENST00000467468 USP29Q9HBJ7 922 aa4.49□□□□□ -1.69
SMC4-208ENST00000467468 RNF7Q9UBF6 113 aa4.49□□□□□ -1.69
SMC4-208ENST00000467468 KLQ9UEF7 1012 aa4.49□□□□□ -1.69
SMC4-208ENST00000467468 ADD3Q9UEY8 706 aaKnown RBP4.49□□□□□ -1.69
SMC4-208ENST00000467468 CYP2D7A0A087X1C5 515 aa4.48□□□□□ -1.69
SMC4-208ENST00000467468 SMIM35A0A1B0GVV1 85 aa4.48□□□□□ -1.69
SMC4-208ENST00000467468 A0A1W2PQM1 296 aa4.48□□□□□ -1.69
SMC4-208ENST00000467468 AGAP14A8MT82 685 aa4.48□□□□□ -1.69
SMC4-208ENST00000467468 KCNU1A8MYU2 1149 aa4.48□□□□□ -1.69
SMC4-208ENST00000467468 URODP06132 367 aa4.48□□□□□ -1.69
SMC4-208ENST00000467468 ABCD1P33897 745 aa4.48□□□□□ -1.69
SMC4-208ENST00000467468 PTGER1P34995 402 aa4.48□□□□□ -1.69
SMC4-208ENST00000467468 ACTN2P35609 894 aa4.48□□□□□ -1.69
SMC4-208ENST00000467468 SSBP2P81877 361 aaPredicted RBP4.48□□□□□ -1.69
SMC4-208ENST00000467468 ALKBH1Q13686 389 aaKnown RBP4.48□□□□□ -1.69
SMC4-208ENST00000467468 MFSD13AQ14CX5 517 aa4.48□□□□□ -1.69
SMC4-208ENST00000467468 WTAPQ15007 396 aa4.48□□□□□ -1.69
SMC4-208ENST00000467468 GPR162Q16538 588 aa4.48□□□□□ -1.69
SMC4-208ENST00000467468 SUPT20HL1Q3ZLR7 823 aa4.48□□□□□ -1.69
SMC4-208ENST00000467468 GXYLT1Q4G148 440 aa4.48□□□□□ -1.69
SMC4-208ENST00000467468 RILPL1Q5EBL4 403 aa4.48□□□□□ -1.69
SMC4-208ENST00000467468 MFSD4BQ5TF39 518 aa4.48□□□□□ -1.69
SMC4-208ENST00000467468 TMCO3Q6UWJ1 677 aa4.48□□□□□ -1.69
SMC4-208ENST00000467468 KYAT3Q6YP21 454 aaKnown RBP4.48□□□□□ -1.69
SMC4-208ENST00000467468 C1QL2Q7Z5L3 287 aa4.48□□□□□ -1.69
SMC4-208ENST00000467468 GALNT7Q86SF2 657 aa4.48□□□□□ -1.69
SMC4-208ENST00000467468 SCN4BQ8IWT1 228 aa4.48□□□□□ -1.69
SMC4-208ENST00000467468 CCDC105Q8IYK2 499 aa4.48□□□□□ -1.69
SMC4-208ENST00000467468 ADPRHL1Q8NDY3 354 aa4.48□□□□□ -1.69
SMC4-208ENST00000467468 PRSS3P2Q8NHM4 247 aa4.48□□□□□ -1.69
SMC4-208ENST00000467468 OSR1Q8TAX0 266 aaPredicted RBP4.48□□□□□ -1.69
SMC4-208ENST00000467468 RAB40AQ8WXH6 277 aa4.48□□□□□ -1.69
SMC4-208ENST00000467468 KIF1BPQ96EK5 621 aa4.48□□□□□ -1.69
SMC4-208ENST00000467468 SAAL1Q96ER3 474 aa4.48□□□□□ -1.69
SMC4-208ENST00000467468 MPHOSPH8Q99549 860 aa4.48□□□□□ -1.69
SMC4-208ENST00000467468 SH2D3AQ9BRG2 576 aa4.48□□□□□ -1.69
SMC4-208ENST00000467468 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.48□□□□□ -1.697e-7■■□□□ 12.7
SMC4-208ENST00000467468 EFHD1Q9BUP0 239 aa4.48□□□□□ -1.69
SMC4-208ENST00000467468 PDGFCQ9NRA1 345 aa4.48□□□□□ -1.69
SMC4-208ENST00000467468 SEPT11Q9NVA2 429 aaKnown RBP4.48□□□□□ -1.69
SMC4-208ENST00000467468 MPP6Q9NZW5 540 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms