RNA–Protein interactions for RNA: ENST00000466959.1

PDCD11-202, Transcript of programmed cell death 11, humanhuman

TSL 2

Gene PDCD11, Length 500 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD11-202ENST00000466959 TTC17Q96AE7 1141 aa13.54□□□□□ -0.24
PDCD11-202ENST00000466959 ACDQ96AP0 544 aa13.54□□□□□ -0.24
PDCD11-202ENST00000466959 LGMNQ99538 433 aa13.54□□□□□ -0.24
PDCD11-202ENST00000466959 SP110Q9HB58 689 aa13.54□□□□□ -0.24
PDCD11-202ENST00000466959 PDFQ9HBH1 243 aa13.54□□□□□ -0.24
PDCD11-202ENST00000466959 VPS51Q9UID3 782 aa13.54□□□□□ -0.24
PDCD11-202ENST00000466959 DNPEPQ9ULA0 475 aa13.54□□□□□ -0.24
PDCD11-202ENST00000466959 PTPRZ1P23471 2315 aaPredicted RBP13.54□□□□□ -0.24
PDCD11-202ENST00000466959 USP34Q70CQ2 3546 aa13.53□□□□□ -0.24
PDCD11-202ENST00000466959 CFAP54Q96N23 3096 aa13.53□□□□□ -0.24
PDCD11-202ENST00000466959 A0A0A0MRY4 1105 aa13.53□□□□□ -0.24
PDCD11-202ENST00000466959 CXorf51AA0A1B0GTR3 108 aa13.53□□□□□ -0.24
PDCD11-202ENST00000466959 BCLAF3A2AJT9 711 aaKnown RBP13.53□□□□□ -0.24
PDCD11-202ENST00000466959 PRRT4C9JH25 899 aa13.53□□□□□ -0.24
PDCD11-202ENST00000466959 H0Y858 1186 aa13.53□□□□□ -0.24
PDCD11-202ENST00000466959 CCDC188H7C350 402 aa13.53□□□□□ -0.24
PDCD11-202ENST00000466959 J3KR12 359 aa13.53□□□□□ -0.24
PDCD11-202ENST00000466959 CBX4O00257 560 aa13.53□□□□□ -0.24
PDCD11-202ENST00000466959 TIMM44O43615 452 aa13.53□□□□□ -0.24
PDCD11-202ENST00000466959 SNAP91O60641 907 aa13.53□□□□□ -0.24
PDCD11-202ENST00000466959 ASLP04424 464 aa13.53□□□□□ -0.24
PDCD11-202ENST00000466959 GLDCP23378 1020 aa13.53□□□□□ -0.24
PDCD11-202ENST00000466959 NUMBP49757 651 aa13.53□□□□□ -0.24
PDCD11-202ENST00000466959 GALK1P51570 392 aa13.53□□□□□ -0.24
PDCD11-202ENST00000466959 GEMIN4P57678 1058 aaKnown RBP13.53□□□□□ -0.24
PDCD11-202ENST00000466959 ARF5P84085 180 aa13.53□□□□□ -0.24
PDCD11-202ENST00000466959 PRKCQQ04759 706 aa13.53□□□□□ -0.24
PDCD11-202ENST00000466959 AP1B1Q10567 949 aa13.53□□□□□ -0.24
PDCD11-202ENST00000466959 SNX1Q13596 522 aa13.53□□□□□ -0.24
PDCD11-202ENST00000466959 BYSLQ13895 437 aaKnown RBP13.53□□□□□ -0.24
PDCD11-202ENST00000466959 OASLQ15646 514 aaKnown RBP13.53□□□□□ -0.24
PDCD11-202ENST00000466959 TMEM215Q68D42 235 aa13.53□□□□□ -0.24
PDCD11-202ENST00000466959 RETSATQ6NUM9 610 aa13.53□□□□□ -0.24
PDCD11-202ENST00000466959 DARS2Q6PI48 645 aaKnown RBP13.53□□□□□ -0.24
PDCD11-202ENST00000466959 TPRG1Q6ZUI0 275 aa13.53□□□□□ -0.24
PDCD11-202ENST00000466959 NUDT18Q6ZVK8 323 aa13.53□□□□□ -0.24
PDCD11-202ENST00000466959 CCDC13Q8IYE1 715 aa13.53□□□□□ -0.24
PDCD11-202ENST00000466959 MAML1Q92585 1016 aa13.53□□□□□ -0.24
PDCD11-202ENST00000466959 MAGOHBQ96A72 148 aaKnown RBP13.53□□□□□ -0.24
PDCD11-202ENST00000466959 ZNF599Q96NL3 588 aa13.53□□□□□ -0.24
PDCD11-202ENST00000466959 ELOVL2Q9NXB9 296 aa13.53□□□□□ -0.24
PDCD11-202ENST00000466959 WNT16Q9UBV4 365 aa13.53□□□□□ -0.24
PDCD11-202ENST00000466959 TRIOO75962 3097 aa13.53□□□□□ -0.24
PDCD11-202ENST00000466959 CFAP69A5D8W1 941 aa13.52□□□□□ -0.25
PDCD11-202ENST00000466959 TBC1D3BA6NDS4 549 aa13.52□□□□□ -0.25
PDCD11-202ENST00000466959 SHISA7A6NL88 538 aa13.52□□□□□ -0.25
PDCD11-202ENST00000466959 PROB1E7EW31 1015 aa13.52□□□□□ -0.25
PDCD11-202ENST00000466959 MAN2B1O00754 1011 aa13.52□□□□□ -0.25
PDCD11-202ENST00000466959 MATN3O15232 486 aa13.52□□□□□ -0.25
PDCD11-202ENST00000466959 MTSS1O43312 755 aa13.52□□□□□ -0.25
PDCD11-202ENST00000466959 ATP5BP06576 529 aaKnown RBP13.52□□□□□ -0.25
PDCD11-202ENST00000466959 ITGAVP06756 1048 aa13.52□□□□□ -0.25
PDCD11-202ENST00000466959 VAV1P15498 845 aa13.52□□□□□ -0.25
PDCD11-202ENST00000466959 CHRNA3P32297 505 aa13.52□□□□□ -0.25
PDCD11-202ENST00000466959 TNFRSF4P43489 277 aa13.52□□□□□ -0.25
PDCD11-202ENST00000466959 FNTAP49354 379 aa13.52□□□□□ -0.25
PDCD11-202ENST00000466959 CLCN6P51797 869 aa13.52□□□□□ -0.25
PDCD11-202ENST00000466959 ECT2LQ008S8 904 aa13.52□□□□□ -0.25
PDCD11-202ENST00000466959 PON2Q15165 354 aa13.52□□□□□ -0.25
PDCD11-202ENST00000466959 TMEM196Q5HYL7 178 aa13.52□□□□□ -0.25
PDCD11-202ENST00000466959 HEATR6Q6AI08 1181 aaKnown RBP13.52□□□□□ -0.25
PDCD11-202ENST00000466959 B4GALNT4Q76KP1 1039 aa13.52□□□□□ -0.25
PDCD11-202ENST00000466959 MNS1Q8NEH6 495 aa13.52□□□□□ -0.25
PDCD11-202ENST00000466959 SPATA4Q8NEY3 305 aa13.52□□□□□ -0.25
PDCD11-202ENST00000466959 LRRN4Q8WUT4 740 aa13.52□□□□□ -0.25
PDCD11-202ENST00000466959 UCMAQ8WVF2 138 aa13.52□□□□□ -0.25
PDCD11-202ENST00000466959 FAM3CQ92520 227 aa13.52□□□□□ -0.25
PDCD11-202ENST00000466959 FERMT1Q9BQL6 677 aa13.52□□□□□ -0.25
PDCD11-202ENST00000466959 CIPCQ9C0C6 399 aa13.52□□□□□ -0.25
PDCD11-202ENST00000466959 L2HGDHQ9H9P8 463 aa13.52□□□□□ -0.25
PDCD11-202ENST00000466959 FBRSL1Q9HCM7 1045 aaKnown RBP13.52□□□□□ -0.25
PDCD11-202ENST00000466959 ARHGEF3Q9NR81 526 aa13.52□□□□□ -0.25
PDCD11-202ENST00000466959 RBM12Q9NTZ6 932 aaKnown RBP13.52□□□□□ -0.25
PDCD11-202ENST00000466959 UBA2Q9UBT2 640 aaPredicted RBP13.52□□□□□ -0.25
PDCD11-202ENST00000466959 SLC25A13Q9UJS0 675 aa13.52□□□□□ -0.25
PDCD11-202ENST00000466959 FBXL21Q9UKT6 434 aa13.52□□□□□ -0.25
PDCD11-202ENST00000466959 CA14Q9ULX7 337 aa13.52□□□□□ -0.25
PDCD11-202ENST00000466959 ZNF148Q9UQR1 794 aa13.52□□□□□ -0.25
PDCD11-202ENST00000466959 DRG1Q9Y295 367 aaKnown RBP13.52□□□□□ -0.25
PDCD11-202ENST00000466959 GALR2O43603 387 aaPredicted RBP13.51□□□□□ -0.25
PDCD11-202ENST00000466959 PEX11BO96011 259 aa13.51□□□□□ -0.25
PDCD11-202ENST00000466959 SRPRAP08240 638 aaKnown RBP13.51□□□□□ -0.25
PDCD11-202ENST00000466959 DLDP09622 509 aaKnown RBP13.51□□□□□ -0.25
PDCD11-202ENST00000466959 DRD1P21728 446 aa13.51□□□□□ -0.25
PDCD11-202ENST00000466959 RBL1P28749 1068 aa13.51□□□□□ -0.25
PDCD11-202ENST00000466959 COILP38432 576 aaPredicted RBP13.51□□□□□ -0.25
PDCD11-202ENST00000466959 CTSOP43234 321 aaPredicted RBP13.51□□□□□ -0.25
PDCD11-202ENST00000466959 ID4P47928 161 aa13.51□□□□□ -0.25
PDCD11-202ENST00000466959 SERPINH1P50454 418 aaKnown RBP13.51□□□□□ -0.25
PDCD11-202ENST00000466959 VASPP50552 380 aaPredicted RBP13.51□□□□□ -0.25
PDCD11-202ENST00000466959 IFI35P80217 286 aaPredicted RBP13.51□□□□□ -0.25
PDCD11-202ENST00000466959 SLC20A2Q08357 652 aa13.51□□□□□ -0.25
PDCD11-202ENST00000466959 GRSF1Q12849 480 aaKnown RBP eCLIP13.51□□□□□ -0.25
PDCD11-202ENST00000466959 RFTN1Q14699 578 aaPredicted RBP13.51□□□□□ -0.25
PDCD11-202ENST00000466959 E2F5Q15329 346 aa13.51□□□□□ -0.25
PDCD11-202ENST00000466959 TMCO4Q5TGY1 634 aa13.51□□□□□ -0.25
PDCD11-202ENST00000466959 FSTL4Q6MZW2 842 aa13.51□□□□□ -0.25
PDCD11-202ENST00000466959 TTC27Q6P3X3 843 aa13.51□□□□□ -0.25
PDCD11-202ENST00000466959 LINGO4Q6UY18 593 aa13.51□□□□□ -0.25
PDCD11-202ENST00000466959 METTL3Q86U44 580 aaKnown RBP13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms