RNA–Protein interactions for RNA: ENST00000466579.1

SDCCAG3-208, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best)

Gene SDCCAG3, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-208ENST00000466579 GEMIN4P57678 1058 aaKnown RBP9.68□□□□□ -0.86
SDCCAG3-208ENST00000466579 SERINC3Q13530 473 aa9.68□□□□□ -0.86
SDCCAG3-208ENST00000466579 POLD3Q15054 466 aaPredicted RBP9.68□□□□□ -0.86
SDCCAG3-208ENST00000466579 ELF2Q15723 593 aa9.68□□□□□ -0.86
SDCCAG3-208ENST00000466579 KCNT1Q5JUK3 1230 aa9.68□□□□□ -0.86
SDCCAG3-208ENST00000466579 PLA2G2CQ5R387 149 aa9.68□□□□□ -0.86
SDCCAG3-208ENST00000466579 PEAR1Q5VY43 1037 aaPredicted RBP9.68□□□□□ -0.86
SDCCAG3-208ENST00000466579 KIAA1324Q6UXG2 1013 aaKnown RBP9.68□□□□□ -0.86
SDCCAG3-208ENST00000466579 CPNE8Q86YQ8 564 aa9.68□□□□□ -0.86
SDCCAG3-208ENST00000466579 GPR161Q8N6U8 529 aaKnown RBP9.68□□□□□ -0.86
SDCCAG3-208ENST00000466579 VOPP1Q96AW1 172 aa9.68□□□□□ -0.86
SDCCAG3-208ENST00000466579 ZNF419Q96HQ0 510 aaPredicted RBP9.68□□□□□ -0.86
SDCCAG3-208ENST00000466579 PCED1AQ9H1Q7 454 aa9.68□□□□□ -0.86
SDCCAG3-208ENST00000466579 PABPC3Q9H361 631 aaKnown RBP9.68□□□□□ -0.86
SDCCAG3-208ENST00000466579 PCDH18Q9HCL0 1135 aa9.68□□□□□ -0.86
SDCCAG3-208ENST00000466579 CD93Q9NPY3 652 aa9.68□□□□□ -0.86
SDCCAG3-208ENST00000466579 GMEB2Q9UKD1 530 aa9.68□□□□□ -0.86
SDCCAG3-208ENST00000466579 PPM1HQ9ULR3 514 aa9.68□□□□□ -0.86
SDCCAG3-208ENST00000466579 INVSQ9Y283 1065 aa9.68□□□□□ -0.86
SDCCAG3-208ENST00000466579 PCDHA13Q9Y5I0 950 aa9.68□□□□□ -0.86
SDCCAG3-208ENST00000466579 EPN1Q9Y6I3 576 aaPredicted RBP9.68□□□□□ -0.86
SDCCAG3-208ENST00000466579 RALGAPA1Q6GYQ0 2036 aa9.68□□□□□ -0.86
SDCCAG3-208ENST00000466579 PTPRZ1P23471 2315 aaPredicted RBP9.67□□□□□ -0.86
SDCCAG3-208ENST00000466579 CFAP54Q96N23 3096 aa9.67□□□□□ -0.86
SDCCAG3-208ENST00000466579 SDK1Q7Z5N4 2213 aa9.67□□□□□ -0.86
SDCCAG3-208ENST00000466579 NUMA1Q14980 2115 aa9.67□□□□□ -0.86
SDCCAG3-208ENST00000466579 BCLAF3A2AJT9 711 aaKnown RBP9.67□□□□□ -0.86
SDCCAG3-208ENST00000466579 SOWAHDA6NJG2 315 aa9.67□□□□□ -0.86
SDCCAG3-208ENST00000466579 BTNL10A8MVZ5 291 aa9.67□□□□□ -0.86
SDCCAG3-208ENST00000466579 ZNF487B1APH4 448 aa9.67□□□□□ -0.86
SDCCAG3-208ENST00000466579 RASA4BC9J798 803 aa9.67□□□□□ -0.86
SDCCAG3-208ENST00000466579 H3BRJ5 948 aa9.67□□□□□ -0.86
SDCCAG3-208ENST00000466579 K7ERQ8 282 aa9.67□□□□□ -0.86
SDCCAG3-208ENST00000466579 CBX4O00257 560 aa9.67□□□□□ -0.86
SDCCAG3-208ENST00000466579 RASA4O43374 803 aa9.67□□□□□ -0.86
SDCCAG3-208ENST00000466579 RNASEH1O60930 286 aaKnown RBP9.67□□□□□ -0.86
SDCCAG3-208ENST00000466579 ADH1BP00325 375 aa9.67□□□□□ -0.86
SDCCAG3-208ENST00000466579 C5AR1P21730 350 aa9.67□□□□□ -0.86
SDCCAG3-208ENST00000466579 CD6P30203 668 aa9.67□□□□□ -0.86
SDCCAG3-208ENST00000466579 HOXD12P35452 270 aa9.67□□□□□ -0.86
SDCCAG3-208ENST00000466579 TAS2R40P59535 323 aa9.67□□□□□ -0.86
SDCCAG3-208ENST00000466579 CST6Q15828 149 aa9.67□□□□□ -0.86
SDCCAG3-208ENST00000466579 HADHQ16836 314 aaKnown RBP9.67□□□□□ -0.86
SDCCAG3-208ENST00000466579 SMTNL2Q2TAL5 461 aa9.67□□□□□ -0.86
SDCCAG3-208ENST00000466579 INO80DQ53TQ3 878 aaPredicted RBP9.67□□□□□ -0.86
SDCCAG3-208ENST00000466579 PPP6R3Q5H9R7 873 aaPredicted RBP9.67□□□□□ -0.86
SDCCAG3-208ENST00000466579 LRRC38Q5VT99 294 aa9.67□□□□□ -0.86
SDCCAG3-208ENST00000466579 IL31Q6EBC2 164 aa9.67□□□□□ -0.86
SDCCAG3-208ENST00000466579 C22orf39Q6P5X5 142 aa9.67□□□□□ -0.86
SDCCAG3-208ENST00000466579 LINGO4Q6UY18 593 aa9.67□□□□□ -0.86
SDCCAG3-208ENST00000466579 RAD9BQ6WBX8 426 aa9.67□□□□□ -0.86
SDCCAG3-208ENST00000466579 LPCAT2Q7L5N7 544 aa9.67□□□□□ -0.86
SDCCAG3-208ENST00000466579 VSIG1Q86XK7 387 aa9.67□□□□□ -0.86
SDCCAG3-208ENST00000466579 ARHGAP12Q8IWW6 846 aa9.67□□□□□ -0.86
SDCCAG3-208ENST00000466579 STK40Q8N2I9 435 aa9.67□□□□□ -0.86
SDCCAG3-208ENST00000466579 LZTR1Q8N653 840 aa9.67□□□□□ -0.86
SDCCAG3-208ENST00000466579 PCDH20Q8N6Y1 951 aaKnown RBP9.67□□□□□ -0.86
SDCCAG3-208ENST00000466579 ATP11CQ8NB49 1132 aa9.67□□□□□ -0.86
SDCCAG3-208ENST00000466579 CADM4Q8NFZ8 388 aa9.67□□□□□ -0.86
SDCCAG3-208ENST00000466579 OR2A12Q8NGT7 310 aa9.67□□□□□ -0.86
SDCCAG3-208ENST00000466579 CASKIN2Q8WXE0 1202 aa9.67□□□□□ -0.86
SDCCAG3-208ENST00000466579 OR8D1Q8WZ84 308 aa9.67□□□□□ -0.86
SDCCAG3-208ENST00000466579 FAF2Q96CS3 445 aa9.67□□□□□ -0.86
SDCCAG3-208ENST00000466579 ERLEC1Q96DZ1 483 aa9.67□□□□□ -0.86
SDCCAG3-208ENST00000466579 HMCESQ96FZ2 354 aa9.67□□□□□ -0.86
SDCCAG3-208ENST00000466579 CALR3Q96L12 384 aaKnown RBP9.67□□□□□ -0.86
SDCCAG3-208ENST00000466579 CSPG4P5Q96PW8 444 aa9.67□□□□□ -0.86
SDCCAG3-208ENST00000466579 SPON2Q9BUD6 331 aa9.67□□□□□ -0.86
SDCCAG3-208ENST00000466579 ZWILCHQ9H900 591 aa9.67□□□□□ -0.86
SDCCAG3-208ENST00000466579 PDFQ9HBH1 243 aa9.67□□□□□ -0.86
SDCCAG3-208ENST00000466579 PARD6AQ9NPB6 346 aa9.67□□□□□ -0.86
SDCCAG3-208ENST00000466579 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.67□□□□□ -0.86
SDCCAG3-208ENST00000466579 FZD4Q9ULV1 537 aa9.67□□□□□ -0.86
SDCCAG3-208ENST00000466579 CYP8B1Q9UNU6 501 aa9.67□□□□□ -0.86
SDCCAG3-208ENST00000466579 REXO2Q9Y3B8 237 aaKnown RBP9.67□□□□□ -0.86
SDCCAG3-208ENST00000466579 LAMA1P25391 3075 aa9.66□□□□□ -0.86
SDCCAG3-208ENST00000466579 MID1O15344 667 aa9.66□□□□□ -0.86
SDCCAG3-208ENST00000466579 PJA2O43164 708 aa9.66□□□□□ -0.86
SDCCAG3-208ENST00000466579 PRAMEF11O60813 436 aa9.66□□□□□ -0.86
SDCCAG3-208ENST00000466579 GSRP00390 522 aa9.66□□□□□ -0.86
SDCCAG3-208ENST00000466579 DNTTP04053 509 aa9.66□□□□□ -0.86
SDCCAG3-208ENST00000466579 CTSLP07711 333 aa9.66□□□□□ -0.86
SDCCAG3-208ENST00000466579 KRT7P08729 469 aa9.66□□□□□ -0.86
SDCCAG3-208ENST00000466579 ACADMP11310 421 aa9.66□□□□□ -0.86
SDCCAG3-208ENST00000466579 SLC8A1P32418 973 aa9.66□□□□□ -0.86
SDCCAG3-208ENST00000466579 DRD3P35462 400 aa9.66□□□□□ -0.86
SDCCAG3-208ENST00000466579 ARL4AP40617 200 aa9.66□□□□□ -0.86
SDCCAG3-208ENST00000466579 DPP6P42658 865 aa9.66□□□□□ -0.86
SDCCAG3-208ENST00000466579 SLC1A1P43005 524 aa9.66□□□□□ -0.86
SDCCAG3-208ENST00000466579 NUMBP49757 651 aa9.66□□□□□ -0.86
SDCCAG3-208ENST00000466579 RPL6Q02878 288 aaKnown RBP9.66□□□□□ -0.86
SDCCAG3-208ENST00000466579 SFSWAPQ12872 951 aaKnown RBP9.66□□□□□ -0.86
SDCCAG3-208ENST00000466579 DPYSL3Q14195 570 aa9.66□□□□□ -0.86
SDCCAG3-208ENST00000466579 PDK2Q15119 407 aa9.66□□□□□ -0.86
SDCCAG3-208ENST00000466579 SPA17Q15506 151 aa9.66□□□□□ -0.86
SDCCAG3-208ENST00000466579 CSRP2Q16527 193 aa9.66□□□□□ -0.86
SDCCAG3-208ENST00000466579 LPAL2Q16609 132 aa9.66□□□□□ -0.86
SDCCAG3-208ENST00000466579 TTC31Q49AM3 519 aaPredicted RBP9.66□□□□□ -0.86
SDCCAG3-208ENST00000466579 Q6ZVU0 165 aa9.66□□□□□ -0.86
SDCCAG3-208ENST00000466579 DSG4Q86SJ6 1040 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms