RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 ZNF599Q96NL3 588 aa11.37□□□□□ -0.59
VCP-204ENST00000466100 SPON2Q9BUD6 331 aa11.37□□□□□ -0.59
VCP-204ENST00000466100 RRAGDQ9NQL2 400 aaPredicted RBP11.37□□□□□ -0.59
VCP-204ENST00000466100 ARHGEF3Q9NR81 526 aa11.37□□□□□ -0.59
VCP-204ENST00000466100 HOMER3Q9NSC5 361 aa11.37□□□□□ -0.59
VCP-204ENST00000466100 ELOVL2Q9NXB9 296 aa11.37□□□□□ -0.59
VCP-204ENST00000466100 WNT16Q9UBV4 365 aa11.37□□□□□ -0.59
VCP-204ENST00000466100 HS3ST2Q9Y278 367 aa11.37□□□□□ -0.59
VCP-204ENST00000466100 DRG1Q9Y295 367 aaKnown RBP11.37□□□□□ -0.59
VCP-204ENST00000466100 STARD13Q9Y3M8 1113 aa11.37□□□□□ -0.59
VCP-204ENST00000466100 ACTL7AQ9Y615 435 aa11.37□□□□□ -0.59
VCP-204ENST00000466100 GOLGA6L10A0A0M3HER8 536 aa11.36□□□□□ -0.59
VCP-204ENST00000466100 ZSCAN5CA6NGD5 496 aaPredicted RBP11.36□□□□□ -0.59
VCP-204ENST00000466100 H7C0C1 242 aa11.36□□□□□ -0.59
VCP-204ENST00000466100 CCDC188H7C350 402 aa11.36□□□□□ -0.59
VCP-204ENST00000466100 KCNK1O00180 336 aa11.36□□□□□ -0.59
VCP-204ENST00000466100 MT-CO1P00395 513 aa11.36□□□□□ -0.59
VCP-204ENST00000466100 EGFP01133 1207 aa11.36□□□□□ -0.59
VCP-204ENST00000466100 ASLP04424 464 aa11.36□□□□□ -0.59
VCP-204ENST00000466100 DLDP09622 509 aaKnown RBP11.36□□□□□ -0.59
VCP-204ENST00000466100 SRCP12931 536 aa11.36□□□□□ -0.59
VCP-204ENST00000466100 POLR2EP19388 210 aaKnown RBP11.36□□□□□ -0.59
VCP-204ENST00000466100 COILP38432 576 aaPredicted RBP11.36□□□□□ -0.59
VCP-204ENST00000466100 TNFRSF4P43489 277 aa11.36□□□□□ -0.59
VCP-204ENST00000466100 KIR2DL1P43626 348 aaPredicted RBP11.36□□□□□ -0.59
VCP-204ENST00000466100 ATP5OP48047 213 aa11.36□□□□□ -0.59
VCP-204ENST00000466100 KCNJ1P48048 391 aa11.36□□□□□ -0.59
VCP-204ENST00000466100 STK19P49842 368 aaPredicted RBP11.36□□□□□ -0.59
VCP-204ENST00000466100 SERPINH1P50454 418 aaKnown RBP11.36□□□□□ -0.59
VCP-204ENST00000466100 GDF10P55107 478 aa11.36□□□□□ -0.59
VCP-204ENST00000466100 STARD6P59095 220 aa11.36□□□□□ -0.59
VCP-204ENST00000466100 ECT2LQ008S8 904 aa11.36□□□□□ -0.59
VCP-204ENST00000466100 SULT2A1Q06520 285 aa11.36□□□□□ -0.59
VCP-204ENST00000466100 AP1B1Q10567 949 aa11.36□□□□□ -0.59
VCP-204ENST00000466100 ZBTB17Q13105 803 aa11.36□□□□□ -0.59
VCP-204ENST00000466100 SNX1Q13596 522 aa11.36□□□□□ -0.59
VCP-204ENST00000466100 CCINQ13939 588 aa11.36□□□□□ -0.59
VCP-204ENST00000466100 TMCO4Q5TGY1 634 aa11.36□□□□□ -0.59
VCP-204ENST00000466100 TIGD7Q6NT04 549 aaPredicted RBP11.36□□□□□ -0.59
VCP-204ENST00000466100 LINGO4Q6UY18 593 aa11.36□□□□□ -0.59
VCP-204ENST00000466100 LEKR1Q6ZMV7 388 aa11.36□□□□□ -0.59
VCP-204ENST00000466100 SH2D3CQ8N5H7 860 aa11.36□□□□□ -0.59
VCP-204ENST00000466100 CYB5D2Q8WUJ1 264 aa11.36□□□□□ -0.59
VCP-204ENST00000466100 HTR3CQ8WXA8 447 aa11.36□□□□□ -0.59
VCP-204ENST00000466100 MAGOHBQ96A72 148 aaKnown RBP11.36□□□□□ -0.59
VCP-204ENST00000466100 IL12RB2Q99665 862 aa11.36□□□□□ -0.59
VCP-204ENST00000466100 TMEM121Q9BTD3 319 aa11.36□□□□□ -0.59
VCP-204ENST00000466100 DDX47Q9H0S4 455 aaKnown RBP11.36□□□□□ -0.59
VCP-204ENST00000466100 SP110Q9HB58 689 aa11.36□□□□□ -0.59
VCP-204ENST00000466100 UBA2Q9UBT2 640 aaPredicted RBP11.36□□□□□ -0.59
VCP-204ENST00000466100 PCYOX1Q9UHG3 505 aa11.36□□□□□ -0.59
VCP-204ENST00000466100 CA14Q9ULX7 337 aa11.36□□□□□ -0.59
VCP-204ENST00000466100 HPCAL4Q9UM19 191 aa11.36□□□□□ -0.59
VCP-204ENST00000466100 ERVW-1Q9UQF0 538 aa11.36□□□□□ -0.59
VCP-204ENST00000466100 ZDBF2Q9HCK1 2354 aa11.36□□□□□ -0.59
VCP-204ENST00000466100 CFAP69A5D8W1 941 aa11.35□□□□□ -0.59
VCP-204ENST00000466100 TBC1D3BA6NDS4 549 aa11.35□□□□□ -0.59
VCP-204ENST00000466100 K7ERQ8 282 aa11.35□□□□□ -0.59
VCP-204ENST00000466100 MAN2B1O00754 1011 aa11.35□□□□□ -0.59
VCP-204ENST00000466100 MUSKO15146 869 aa11.35□□□□□ -0.59
VCP-204ENST00000466100 SMAD6O43541 496 aaKnown RBP11.35□□□□□ -0.59
VCP-204ENST00000466100 TIMM44O43615 452 aa11.35□□□□□ -0.59
VCP-204ENST00000466100 ATP9BO43861 1147 aa11.35□□□□□ -0.59
VCP-204ENST00000466100 ZNF821O75541 412 aaPredicted RBP11.35□□□□□ -0.59
VCP-204ENST00000466100 TMCC1O94876 653 aa11.35□□□□□ -0.59
VCP-204ENST00000466100 SRPRAP08240 638 aaKnown RBP11.35□□□□□ -0.59
VCP-204ENST00000466100 CCNB1P14635 433 aa11.35□□□□□ -0.59
VCP-204ENST00000466100 HNRNPLP14866 589 aaKnown RBP eCLIP11.35□□□□□ -0.59
VCP-204ENST00000466100 DRD1P21728 446 aa11.35□□□□□ -0.59
VCP-204ENST00000466100 PTPN3P26045 913 aa11.35□□□□□ -0.59
VCP-204ENST00000466100 CHRNA3P32297 505 aa11.35□□□□□ -0.59
VCP-204ENST00000466100 NRLP54845 237 aa11.35□□□□□ -0.59
VCP-204ENST00000466100 GEMIN4P57678 1058 aaKnown RBP11.35□□□□□ -0.59
VCP-204ENST00000466100 ZXDAP98168 799 aa11.35□□□□□ -0.59
VCP-204ENST00000466100 C2orf54Q08AI8 447 aa11.35□□□□□ -0.59
VCP-204ENST00000466100 SLC10A7Q0GE19 358 aa11.35□□□□□ -0.59
VCP-204ENST00000466100 ENPP2Q13822 863 aa11.35□□□□□ -0.59
VCP-204ENST00000466100 HNRNPDQ14103 355 aaKnown RBP11.35□□□□□ -0.59
VCP-204ENST00000466100 RFTN1Q14699 578 aaPredicted RBP11.35□□□□□ -0.59
VCP-204ENST00000466100 CYTH1Q15438 398 aa11.35□□□□□ -0.59
VCP-204ENST00000466100 INO80DQ53TQ3 878 aaPredicted RBP11.35□□□□□ -0.59
VCP-204ENST00000466100 DNTTIP2Q5QJE6 756 aaKnown RBP11.35□□□□□ -0.59
VCP-204ENST00000466100 FAM182AQ5T1J6 154 aa11.35□□□□□ -0.59
VCP-204ENST00000466100 EGFLAMQ63HQ2 1017 aa11.35□□□□□ -0.59
VCP-204ENST00000466100 HEATR6Q6AI08 1181 aaKnown RBP11.35□□□□□ -0.59
VCP-204ENST00000466100 RETSATQ6NUM9 610 aa11.35□□□□□ -0.59
VCP-204ENST00000466100 DARS2Q6PI48 645 aaKnown RBP11.35□□□□□ -0.59
VCP-204ENST00000466100 CCDC137Q6PK04 289 aaKnown RBP11.35□□□□□ -0.59
VCP-204ENST00000466100 ZNF354CQ86Y25 554 aa11.35□□□□□ -0.59
VCP-204ENST00000466100 ALLCQ8N6M5 410 aa11.35□□□□□ -0.59
VCP-204ENST00000466100 CNTD1Q8N815 330 aa11.35□□□□□ -0.59
VCP-204ENST00000466100 KDM1BQ8NB78 822 aa11.35□□□□□ -0.59
VCP-204ENST00000466100 GLIS1Q8NBF1 620 aa11.35□□□□□ -0.59
VCP-204ENST00000466100 CCNYQ8ND76 341 aa11.35□□□□□ -0.59
VCP-204ENST00000466100 CASKIN2Q8WXE0 1202 aa11.35□□□□□ -0.59
VCP-204ENST00000466100 FAM3CQ92520 227 aa11.35□□□□□ -0.59
VCP-204ENST00000466100 SLCO2A1Q92959 643 aa11.35□□□□□ -0.59
VCP-204ENST00000466100 RPL10LQ96L21 214 aaKnown RBP11.35□□□□□ -0.59
VCP-204ENST00000466100 UHRF1Q96T88 793 aaPredicted RBP11.35□□□□□ -0.59
VCP-204ENST00000466100 CIPCQ9C0C6 399 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms