RNA–Protein interactions for RNA: ENST00000466054.1

LRCH3-211, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2

Gene LRCH3, Length 683 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-211ENST00000466054 PLK5Q496M5 336 aa4.67□□□□□ -1.66
LRCH3-211ENST00000466054 WDR45BQ5MNZ6 344 aa4.67□□□□□ -1.66
LRCH3-211ENST00000466054 UBAP2Q5T6F2 1119 aaKnown RBP4.67□□□□□ -1.66
LRCH3-211ENST00000466054 NAA35Q5VZE5 725 aa4.67□□□□□ -1.66
LRCH3-211ENST00000466054 ATG16L1Q676U5 607 aa4.67□□□□□ -1.66
LRCH3-211ENST00000466054 CYB5R4Q7L1T6 521 aa4.67□□□□□ -1.66
LRCH3-211ENST00000466054 VPS52Q8N1B4 723 aa4.67□□□□□ -1.66
LRCH3-211ENST00000466054 IL17REQ8NFR9 667 aa4.67□□□□□ -1.66
LRCH3-211ENST00000466054 WIPF2Q8TF74 440 aaPredicted RBP4.67□□□□□ -1.66
LRCH3-211ENST00000466054 CADM1Q9BY67 442 aaKnown RBP4.67□□□□□ -1.66
LRCH3-211ENST00000466054 SLCO5A1Q9H2Y9 848 aa4.67□□□□□ -1.66
LRCH3-211ENST00000466054 WASH6PQ9NQA3 447 aa4.67□□□□□ -1.66
LRCH3-211ENST00000466054 C9orf78Q9NZ63 289 aaPredicted RBP4.67□□□□□ -1.66
LRCH3-211ENST00000466054 KIR2DS5A0A0G2JLQ3 304 aa4.66□□□□□ -1.66
LRCH3-211ENST00000466054 A0A1B0GVC2 190 aa4.66□□□□□ -1.66
LRCH3-211ENST00000466054 KIR2DS3K7RE56 304 aa4.66□□□□□ -1.66
LRCH3-211ENST00000466054 GTPBP1O00178 669 aaKnown RBP4.66□□□□□ -1.66
LRCH3-211ENST00000466054 MSI1O43347 362 aaKnown RBP4.66□□□□□ -1.66
LRCH3-211ENST00000466054 POLBP06746 335 aa4.66□□□□□ -1.66
LRCH3-211ENST00000466054 CPA1P15085 419 aa4.66□□□□□ -1.66
LRCH3-211ENST00000466054 XBP1P17861 261 aa4.66□□□□□ -1.66
LRCH3-211ENST00000466054 CNTFP26441 200 aa4.66□□□□□ -1.66
LRCH3-211ENST00000466054 PSMC2P35998 433 aaKnown RBP4.66□□□□□ -1.66
LRCH3-211ENST00000466054 ARHGAP8P85298 464 aa4.66□□□□□ -1.66
LRCH3-211ENST00000466054 ZNF91Q05481 1191 aa4.66□□□□□ -1.66
LRCH3-211ENST00000466054 ZBTB16Q05516 673 aa4.66□□□□□ -1.66
LRCH3-211ENST00000466054 POU5F1BQ06416 359 aa4.66□□□□□ -1.66
LRCH3-211ENST00000466054 BYSLQ13895 437 aaKnown RBP4.66□□□□□ -1.66
LRCH3-211ENST00000466054 TTC39AQ5SRH9 613 aa4.66□□□□□ -1.66
LRCH3-211ENST00000466054 C10orf25Q5T742 122 aa4.66□□□□□ -1.66
LRCH3-211ENST00000466054 MMS22LQ6ZRQ5 1243 aa4.66□□□□□ -1.66
LRCH3-211ENST00000466054 BRSK2Q8IWQ3 736 aa4.66□□□□□ -1.66
LRCH3-211ENST00000466054 IGFBPL1Q8WX77 278 aa4.66□□□□□ -1.66
LRCH3-211ENST00000466054 FRG2BQ96QU4 278 aa4.66□□□□□ -1.66
LRCH3-211ENST00000466054 SCNM1Q9BWG6 230 aa4.66□□□□□ -1.66
LRCH3-211ENST00000466054 TAOK3Q9H2K8 898 aa4.66□□□□□ -1.66
LRCH3-211ENST00000466054 Q9N2J8 555 aa4.66□□□□□ -1.66
LRCH3-211ENST00000466054 TMEM45AQ9NWC5 275 aa4.66□□□□□ -1.66
LRCH3-211ENST00000466054 GGA3Q9NZ52 723 aa4.66□□□□□ -1.66
LRCH3-211ENST00000466054 AGO2Q9UKV8 859 aaKnown RBP4.66□□□□□ -1.66
LRCH3-211ENST00000466054 TRBV5-3A0A0A0MS03 114 aa4.65□□□□□ -1.67
LRCH3-211ENST00000466054 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.65□□□□□ -1.67
LRCH3-211ENST00000466054 SERINC4A6NH21 518 aa4.65□□□□□ -1.67
LRCH3-211ENST00000466054 PEX12O00623 359 aa4.65□□□□□ -1.67
LRCH3-211ENST00000466054 KLK10O43240 276 aa4.65□□□□□ -1.67
LRCH3-211ENST00000466054 WNT1P04628 370 aa4.65□□□□□ -1.67
LRCH3-211ENST00000466054 PYGLP06737 847 aa4.65□□□□□ -1.67
LRCH3-211ENST00000466054 WEE2P0C1S8 567 aa4.65□□□□□ -1.67
LRCH3-211ENST00000466054 PSG1P11464 419 aa4.65□□□□□ -1.67
LRCH3-211ENST00000466054 TYK2P29597 1187 aa4.65□□□□□ -1.67
LRCH3-211ENST00000466054 GJC1P36383 396 aa4.65□□□□□ -1.67
LRCH3-211ENST00000466054 DLGAP5Q15398 846 aa4.65□□□□□ -1.67
LRCH3-211ENST00000466054 C5orf22Q49AR2 442 aa4.65□□□□□ -1.67
LRCH3-211ENST00000466054 ZNF585BQ52M93 769 aa4.65□□□□□ -1.67
LRCH3-211ENST00000466054 ARL13AQ5H913 290 aaPredicted RBP4.65□□□□□ -1.67
LRCH3-211ENST00000466054 FAM171A1Q5VUB5 890 aa4.65□□□□□ -1.67
LRCH3-211ENST00000466054 DAB2IPQ5VWQ8 1189 aa4.65□□□□□ -1.67
LRCH3-211ENST00000466054 RETSATQ6NUM9 610 aa4.65□□□□□ -1.67
LRCH3-211ENST00000466054 GJB7Q6PEY0 223 aa4.65□□□□□ -1.67
LRCH3-211ENST00000466054 LRRC8DQ7L1W4 858 aa4.65□□□□□ -1.67
LRCH3-211ENST00000466054 IGFN1Q86VF2 1251 aa4.65□□□□□ -1.67
LRCH3-211ENST00000466054 ANKRD13BQ86YJ7 626 aa4.65□□□□□ -1.67
LRCH3-211ENST00000466054 TMTC1Q8IUR5 882 aa4.65□□□□□ -1.67
LRCH3-211ENST00000466054 DCP1BQ8IZD4 617 aaKnown RBP4.65□□□□□ -1.67
LRCH3-211ENST00000466054 SLC44A5Q8NCS7 719 aa4.65□□□□□ -1.67
LRCH3-211ENST00000466054 C2CD4CQ8TF44 421 aa4.65□□□□□ -1.67
LRCH3-211ENST00000466054 IP6K1Q92551 441 aa4.65□□□□□ -1.67
LRCH3-211ENST00000466054 WBP1Q96G27 269 aa4.65□□□□□ -1.67
LRCH3-211ENST00000466054 GPR63Q9BZJ6 419 aa4.65□□□□□ -1.67
LRCH3-211ENST00000466054 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.65□□□□□ -1.67
LRCH3-211ENST00000466054 STN1Q9H668 368 aaKnown RBP4.65□□□□□ -1.67
LRCH3-211ENST00000466054 IL21RQ9HBE5 538 aa4.65□□□□□ -1.67
LRCH3-211ENST00000466054 LAMP3Q9UQV4 416 aa4.65□□□□□ -1.67
LRCH3-211ENST00000466054 ZMYM2Q9UBW7 1377 aa4.65□□□□□ -1.67
LRCH3-211ENST00000466054 CXorf65A6NEN9 183 aa4.64□□□□□ -1.67
LRCH3-211ENST00000466054 LACTBL1A8MY62 500 aa4.64□□□□□ -1.67
LRCH3-211ENST00000466054 FOXO6A8MYZ6 492 aa4.64□□□□□ -1.67
LRCH3-211ENST00000466054 RHODO00212 210 aa4.64□□□□□ -1.67
LRCH3-211ENST00000466054 TLX3O43711 291 aaPredicted RBP4.64□□□□□ -1.67
LRCH3-211ENST00000466054 HBP1O60381 514 aa4.64□□□□□ -1.67
LRCH3-211ENST00000466054 UGDHO60701 494 aa4.64□□□□□ -1.67
LRCH3-211ENST00000466054 GUCY1B2O75343 617 aa4.64□□□□□ -1.67
LRCH3-211ENST00000466054 NEURL1O76050 574 aa4.64□□□□□ -1.67
LRCH3-211ENST00000466054 GAS8-AS1O95177 125 aa4.64□□□□□ -1.67
LRCH3-211ENST00000466054 IFIT1P09914 478 aaKnown RBP4.64□□□□□ -1.67
LRCH3-211ENST00000466054 CIITAP33076 1130 aa4.64□□□□□ -1.67
LRCH3-211ENST00000466054 HNF1BP35680 557 aa4.64□□□□□ -1.67
LRCH3-211ENST00000466054 GPD2P43304 727 aa4.64□□□□□ -1.67
LRCH3-211ENST00000466054 CYP2J2P51589 502 aa4.64□□□□□ -1.67
LRCH3-211ENST00000466054 SRSF1Q07955 248 aaKnown RBP eCLIP4.64□□□□□ -1.67
LRCH3-211ENST00000466054 LEXMQ3ZCV2 418 aa4.64□□□□□ -1.67
LRCH3-211ENST00000466054 INTS11Q5TA45 600 aaKnown RBP4.64□□□□□ -1.67
LRCH3-211ENST00000466054 CCDC70Q6NSX1 233 aa4.64□□□□□ -1.67
LRCH3-211ENST00000466054 ZNF793Q6ZN11 406 aa4.64□□□□□ -1.67
LRCH3-211ENST00000466054 RNF144BQ7Z419 303 aa4.64□□□□□ -1.67
LRCH3-211ENST00000466054 DDIASQ8IXT1 998 aa4.64□□□□□ -1.67
LRCH3-211ENST00000466054 KAT2AQ92830 837 aa4.64□□□□□ -1.67
LRCH3-211ENST00000466054 RNFT2Q96EX2 444 aa4.64□□□□□ -1.67
LRCH3-211ENST00000466054 TEFMQ96QE5 360 aaKnown RBP4.64□□□□□ -1.67
LRCH3-211ENST00000466054 CD180Q99467 661 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms