RNA–Protein interactions for RNA: ENST00000464313.1

PTPN12-210, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 4

Gene PTPN12, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-210ENST00000464313 DDAH2O95865 285 aa4.41□□□□□ -1.7
PTPN12-210ENST00000464313 TOP3BO95985 862 aaKnown RBP4.41□□□□□ -1.7
PTPN12-210ENST00000464313 CHRNB1P11230 501 aa4.41□□□□□ -1.7
PTPN12-210ENST00000464313 ATP1A3P13637 1013 aa4.41□□□□□ -1.7
PTPN12-210ENST00000464313 XBP1P17861 261 aa4.41□□□□□ -1.7
PTPN12-210ENST00000464313 GGT5P36269 586 aa4.41□□□□□ -1.7
PTPN12-210ENST00000464313 GJC1P36383 396 aa4.41□□□□□ -1.7
PTPN12-210ENST00000464313 MMP13P45452 471 aa4.41□□□□□ -1.7
PTPN12-210ENST00000464313 MTX1Q13505 466 aa4.41□□□□□ -1.7
PTPN12-210ENST00000464313 NAA25Q14CX7 972 aa4.41□□□□□ -1.7
PTPN12-210ENST00000464313 NFIL3Q16649 462 aa4.41□□□□□ -1.7
PTPN12-210ENST00000464313 PLK5Q496M5 336 aa4.41□□□□□ -1.7
PTPN12-210ENST00000464313 C10orf25Q5T742 122 aa4.41□□□□□ -1.7
PTPN12-210ENST00000464313 ASPHD1Q5U4P2 390 aa4.41□□□□□ -1.7
PTPN12-210ENST00000464313 JAKMIP3Q5VZ66 844 aa4.41□□□□□ -1.7
PTPN12-210ENST00000464313 HMBOX1Q6NT76 420 aa4.41□□□□□ -1.7
PTPN12-210ENST00000464313 GJB7Q6PEY0 223 aa4.41□□□□□ -1.7
PTPN12-210ENST00000464313 SLC22A25Q6T423 547 aa4.41□□□□□ -1.7
PTPN12-210ENST00000464313 DEF8Q6ZN54 512 aa4.41□□□□□ -1.7
PTPN12-210ENST00000464313 UBE2Q1Q7Z7E8 422 aa4.41□□□□□ -1.7
PTPN12-210ENST00000464313 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.41□□□□□ -1.7
PTPN12-210ENST00000464313 PAF1Q8N7H5 531 aa4.41□□□□□ -1.7
PTPN12-210ENST00000464313 SETD9Q8NE22 299 aa4.41□□□□□ -1.7
PTPN12-210ENST00000464313 CMASQ8NFW8 434 aaPredicted RBP4.41□□□□□ -1.7
PTPN12-210ENST00000464313 ZBTB10Q96DT7 871 aa4.41□□□□□ -1.7
PTPN12-210ENST00000464313 RRP36Q96EU6 259 aaKnown RBP4.41□□□□□ -1.7
PTPN12-210ENST00000464313 TUBB6Q9BUF5 446 aa4.41□□□□□ -1.7
PTPN12-210ENST00000464313 IFT27Q9BW83 186 aa4.41□□□□□ -1.7
PTPN12-210ENST00000464313 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.41□□□□□ -1.7
PTPN12-210ENST00000464313 SLC32A1Q9H598 525 aa4.41□□□□□ -1.7
PTPN12-210ENST00000464313 TTC12Q9H892 705 aaPredicted RBP4.41□□□□□ -1.7
PTPN12-210ENST00000464313 SPAG4Q9NPE6 437 aa4.41□□□□□ -1.7
PTPN12-210ENST00000464313 NLKQ9UBE8 527 aa4.41□□□□□ -1.7
PTPN12-210ENST00000464313 PGAP2Q9UHJ9 254 aa4.41□□□□□ -1.7
PTPN12-210ENST00000464313 AGO2Q9UKV8 859 aaKnown RBP4.41□□□□□ -1.7
PTPN12-210ENST00000464313 SUFUQ9UMX1 484 aa4.41□□□□□ -1.7
PTPN12-210ENST00000464313 COG5Q9UP83 839 aa4.41□□□□□ -1.7
PTPN12-210ENST00000464313 BTBD3Q9Y2F9 522 aa4.41□□□□□ -1.7
PTPN12-210ENST00000464313 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.41□□□□□ -1.7
PTPN12-210ENST00000464313 TRBV5-7A0A0A0MS05 114 aa4.4□□□□□ -1.71
PTPN12-210ENST00000464313 PER2O15055 1255 aa4.4□□□□□ -1.71
PTPN12-210ENST00000464313 STRNO43815 780 aa4.4□□□□□ -1.71
PTPN12-210ENST00000464313 CNOT3O75175 753 aaKnown RBP4.4□□□□□ -1.71
PTPN12-210ENST00000464313 HLA-DQA2P01906 255 aa4.4□□□□□ -1.71
PTPN12-210ENST00000464313 PTGER1P34995 402 aa4.4□□□□□ -1.71
PTPN12-210ENST00000464313 PSMC2P35998 433 aaKnown RBP4.4□□□□□ -1.71
PTPN12-210ENST00000464313 TMPRSS3P57727 454 aa4.4□□□□□ -1.71
PTPN12-210ENST00000464313 VAMP2P63027 116 aa4.4□□□□□ -1.71
PTPN12-210ENST00000464313 GAD2Q05329 585 aa4.4□□□□□ -1.71
PTPN12-210ENST00000464313 POU5F1BQ06416 359 aa4.4□□□□□ -1.71
PTPN12-210ENST00000464313 TBL3Q12788 808 aaKnown RBP4.4□□□□□ -1.71
PTPN12-210ENST00000464313 TRIP6Q15654 476 aaKnown RBP4.4□□□□□ -1.71
PTPN12-210ENST00000464313 ALG10Q5BKT4 473 aa4.4□□□□□ -1.71
PTPN12-210ENST00000464313 ALG10BQ5I7T1 473 aa4.4□□□□□ -1.71
PTPN12-210ENST00000464313 C6orf10Q5SRN2 563 aa4.4□□□□□ -1.71
PTPN12-210ENST00000464313 TTLL5Q6EMB2 1281 aa4.4□□□□□ -1.71
PTPN12-210ENST00000464313 ISM2Q6H9L7 571 aa4.4□□□□□ -1.71
PTPN12-210ENST00000464313 CCDC70Q6NSX1 233 aa4.4□□□□□ -1.71
PTPN12-210ENST00000464313 AADACL2Q6P093 401 aa4.4□□□□□ -1.71
PTPN12-210ENST00000464313 CRELD2Q6UXH1 353 aaPredicted RBP4.4□□□□□ -1.71
PTPN12-210ENST00000464313 LRRC8DQ7L1W4 858 aa4.4□□□□□ -1.71
PTPN12-210ENST00000464313 ADGRG6Q86SQ4 1221 aa4.4□□□□□ -1.71
PTPN12-210ENST00000464313 MON1AQ86VX9 555 aa4.4□□□□□ -1.71
PTPN12-210ENST00000464313 GPSM1Q86YR5 675 aa4.4□□□□□ -1.71
PTPN12-210ENST00000464313 GHDCQ8N2G8 530 aa4.4□□□□□ -1.71
PTPN12-210ENST00000464313 RFWD2Q8NHY2 731 aa4.4□□□□□ -1.71
PTPN12-210ENST00000464313 FAR1Q8WVX9 515 aa4.4□□□□□ -1.71
PTPN12-210ENST00000464313 ST8SIA4Q92187 359 aa4.4□□□□□ -1.71
PTPN12-210ENST00000464313 COQ8BQ96D53 544 aa4.4□□□□□ -1.71
PTPN12-210ENST00000464313 FRG2BQ96QU4 278 aa4.4□□□□□ -1.71
PTPN12-210ENST00000464313 EYA3Q99504 573 aa4.4□□□□□ -1.71
PTPN12-210ENST00000464313 LBHD1Q9BQE6 289 aaPredicted RBP4.4□□□□□ -1.71
PTPN12-210ENST00000464313 AGXT2Q9BYV1 514 aa4.4□□□□□ -1.71
PTPN12-210ENST00000464313 ACTR5Q9H9F9 607 aaPredicted RBP4.4□□□□□ -1.71
PTPN12-210ENST00000464313 UBN1Q9NPG3 1134 aa4.4□□□□□ -1.71
PTPN12-210ENST00000464313 HEY2Q9UBP5 337 aa4.4□□□□□ -1.71
PTPN12-210ENST00000464313 PLEKHB1Q9UF11 243 aaPredicted RBP4.4□□□□□ -1.71
PTPN12-210ENST00000464313 TBX20Q9UMR3 447 aa4.4□□□□□ -1.71
PTPN12-210ENST00000464313 ARHGAP26Q9UNA1 814 aa4.4□□□□□ -1.71
PTPN12-210ENST00000464313 DHDHQ9UQ10 334 aa4.4□□□□□ -1.71
PTPN12-210ENST00000464313 ZNF521Q96K83 1311 aa4.4□□□□□ -1.71
PTPN12-210ENST00000464313 ZMYM2Q9UBW7 1377 aa4.4□□□□□ -1.71
PTPN12-210ENST00000464313 OR6C68A6NDL8 312 aa4.39□□□□□ -1.71
PTPN12-210ENST00000464313 ZNF814B7Z6K7 855 aa4.39□□□□□ -1.71
PTPN12-210ENST00000464313 TLX3O43711 291 aaPredicted RBP4.39□□□□□ -1.71
PTPN12-210ENST00000464313 ADAP00813 363 aa4.39□□□□□ -1.71
PTPN12-210ENST00000464313 IFIT1P09914 478 aaKnown RBP4.39□□□□□ -1.71
PTPN12-210ENST00000464313 NR1H2P55055 460 aa4.39□□□□□ -1.71
PTPN12-210ENST00000464313 G3BP1Q13283 466 aaKnown RBP eCLIP4.39□□□□□ -1.71
PTPN12-210ENST00000464313 FHL1Q13642 323 aa4.39□□□□□ -1.71
PTPN12-210ENST00000464313 RABEP1Q15276 862 aa4.39□□□□□ -1.71
PTPN12-210ENST00000464313 RBMS2Q15434 407 aaKnown RBP4.39□□□□□ -1.71
PTPN12-210ENST00000464313 GPR68Q15743 365 aa4.39□□□□□ -1.71
PTPN12-210ENST00000464313 SLC18A3Q16572 532 aa4.39□□□□□ -1.71
PTPN12-210ENST00000464313 SYTL3Q4VX76 610 aa4.39□□□□□ -1.71
PTPN12-210ENST00000464313 KLHL22Q53GT1 634 aa4.39□□□□□ -1.71
PTPN12-210ENST00000464313 PIK3CD-AS1Q5SR53 167 aa4.39□□□□□ -1.71
PTPN12-210ENST00000464313 TTC39AQ5SRH9 613 aa4.39□□□□□ -1.71
PTPN12-210ENST00000464313 INTS11Q5TA45 600 aaKnown RBP4.39□□□□□ -1.71
PTPN12-210ENST00000464313 VWA5B1Q5TIE3 1220 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms