RNA–Protein interactions for RNA: ENST00000464275.5

PDLIM2-216, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,995 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-216ENST00000464275 TMEM135Q86UB9 458 aa22.14■■□□□ 1.14
PDLIM2-216ENST00000464275 PDZD8Q8NEN9 1154 aa22.14■■□□□ 1.14
PDLIM2-216ENST00000464275 OVCA2Q8WZ82 227 aa22.14■■□□□ 1.14
PDLIM2-216ENST00000464275 ZNF75CPQ92670 426 aaPredicted RBP22.14■■□□□ 1.14
PDLIM2-216ENST00000464275 ZNF669Q96BR6 464 aaPredicted RBP22.14■■□□□ 1.14
PDLIM2-216ENST00000464275 VWCEQ96DN2 955 aa22.14■■□□□ 1.14
PDLIM2-216ENST00000464275 IQCGQ9H095 443 aaKnown RBP22.14■■□□□ 1.14
PDLIM2-216ENST00000464275 CCSER2Q9H7U1 834 aa22.14■■□□□ 1.14
PDLIM2-216ENST00000464275 RBM22Q9NW64 420 aaKnown RBP eCLIP22.14■■□□□ 1.14
PDLIM2-216ENST00000464275 AFF4Q9UHB7 1163 aaKnown RBP22.14■■□□□ 1.14
PDLIM2-216ENST00000464275 HBS1LQ9Y450 684 aaKnown RBP22.14■■□□□ 1.14
PDLIM2-216ENST00000464275 FAM237BA0A1B0GVD1 139 aa22.14■■□□□ 1.13
PDLIM2-216ENST00000464275 DRGXA6NNA5 263 aa22.14■■□□□ 1.13
PDLIM2-216ENST00000464275 DHRS4L1P0CG22 281 aa22.14■■□□□ 1.13
PDLIM2-216ENST00000464275 RAP1GAP2Q684P5 730 aa22.14■■□□□ 1.13
PDLIM2-216ENST00000464275 FBXL22Q6P050 247 aa22.14■■□□□ 1.13
PDLIM2-216ENST00000464275 PACS1Q6VY07 963 aa22.14■■□□□ 1.13
PDLIM2-216ENST00000464275 RASSF3Q86WH2 238 aa22.14■■□□□ 1.13
PDLIM2-216ENST00000464275 SERBP1Q8NC51 408 aaKnown RBP eCLIP22.14■■□□□ 1.13
PDLIM2-216ENST00000464275 DIS3LQ8TF46 1054 aaKnown RBP22.14■■□□□ 1.13
PDLIM2-216ENST00000464275 TOP1MTQ969P6 601 aa22.14■■□□□ 1.13
PDLIM2-216ENST00000464275 RAB3IPQ96QF0 476 aaPredicted RBP22.14■■□□□ 1.13
PDLIM2-216ENST00000464275 UBP1Q9NZI7 540 aa22.14■■□□□ 1.13
PDLIM2-216ENST00000464275 HSFX1Q9UBD0 423 aa22.14■■□□□ 1.13
PDLIM2-216ENST00000464275 ABHD14A-ACY1A0A1B0GW23 586 aa22.13■■□□□ 1.13
PDLIM2-216ENST00000464275 HMX2A2RU54 273 aa22.13■■□□□ 1.13
PDLIM2-216ENST00000464275 EDF1O60869 148 aaKnown RBP22.13■■□□□ 1.13
PDLIM2-216ENST00000464275 NEBLO76041 1014 aa22.13■■□□□ 1.13
PDLIM2-216ENST00000464275 SOD2P04179 222 aa22.13■■□□□ 1.13
PDLIM2-216ENST00000464275 CLTBP09497 229 aa22.13■■□□□ 1.13
PDLIM2-216ENST00000464275 ETV4P43268 484 aa22.13■■□□□ 1.13
PDLIM2-216ENST00000464275 MROH9Q5TGP6 573 aa22.13■■□□□ 1.13
PDLIM2-216ENST00000464275 FAM47EQ6ZV65 393 aa22.13■■□□□ 1.13
PDLIM2-216ENST00000464275 FCRL3Q96P31 734 aaPredicted RBP22.13■■□□□ 1.13
PDLIM2-216ENST00000464275 SRPK1Q96SB4 655 aaKnown RBP22.13■■□□□ 1.13
PDLIM2-216ENST00000464275 TBL1YQ9BQ87 522 aa22.13■■□□□ 1.13
PDLIM2-216ENST00000464275 APOL2Q9BQE5 337 aa22.13■■□□□ 1.13
PDLIM2-216ENST00000464275 ZFATQ9P243 1243 aa22.13■■□□□ 1.13
PDLIM2-216ENST00000464275 PHTF1Q9UMS5 762 aa22.13■■□□□ 1.13
PDLIM2-216ENST00000464275 SOX13Q9UN79 622 aa22.13■■□□□ 1.13
PDLIM2-216ENST00000464275 CNTN5O94779 1100 aa22.12■■□□□ 1.13
PDLIM2-216ENST00000464275 UNC5CO95185 931 aa22.12■■□□□ 1.13
PDLIM2-216ENST00000464275 HLA-DQB2P05538 268 aa22.12■■□□□ 1.13
PDLIM2-216ENST00000464275 SF3A3Q12874 501 aaKnown RBP eCLIP22.12■■□□□ 1.13
PDLIM2-216ENST00000464275 ANKRD20A4Q4UJ75 823 aa22.12■■□□□ 1.13
PDLIM2-216ENST00000464275 ALFQ53S48 1182 aa22.12■■□□□ 1.13
PDLIM2-216ENST00000464275 CERCAMQ5T4B2 595 aa22.12■■□□□ 1.13
PDLIM2-216ENST00000464275 SNX30Q5VWJ9 437 aa22.12■■□□□ 1.13
PDLIM2-216ENST00000464275 CES3Q6UWW8 571 aa22.12■■□□□ 1.13
PDLIM2-216ENST00000464275 TFAP2DQ7Z6R9 452 aa22.12■■□□□ 1.13
PDLIM2-216ENST00000464275 CHSY1Q86X52 802 aa22.12■■□□□ 1.13
PDLIM2-216ENST00000464275 IGSF8Q969P0 613 aa22.12■■□□□ 1.13
PDLIM2-216ENST00000464275 ZNF689Q96CS4 500 aaPredicted RBP22.12■■□□□ 1.13
PDLIM2-216ENST00000464275 ZNF558Q96NG5 402 aa22.12■■□□□ 1.13
PDLIM2-216ENST00000464275 FAM111AQ96PZ2 611 aa22.12■■□□□ 1.13
PDLIM2-216ENST00000464275 CLSTN3Q9BQT9 956 aa22.12■■□□□ 1.13
PDLIM2-216ENST00000464275 C12orf65Q9H3J6 166 aaKnown RBP22.12■■□□□ 1.13
PDLIM2-216ENST00000464275 BAIAP2L1Q9UHR4 511 aa22.12■■□□□ 1.13
PDLIM2-216ENST00000464275 MRPL42Q9Y6G3 142 aaKnown RBP22.12■■□□□ 1.13
PDLIM2-216ENST00000464275 ATP9BO43861 1147 aa22.12■■□□□ 1.13
PDLIM2-216ENST00000464275 ATP5C1P36542 298 aaKnown RBP22.12■■□□□ 1.13
PDLIM2-216ENST00000464275 SPATA22Q8NHS9 363 aa22.12■■□□□ 1.13
PDLIM2-216ENST00000464275 RMDN2Q96LZ7 410 aa22.12■■□□□ 1.13
PDLIM2-216ENST00000464275 HERC2P3Q9BVR0 1158 aa22.12■■□□□ 1.13
PDLIM2-216ENST00000464275 DNMT3LQ9UJW3 386 aa22.12■■□□□ 1.13
PDLIM2-216ENST00000464275 C2CD2LO14523 706 aa22.11■■□□□ 1.13
PDLIM2-216ENST00000464275 ABLIM3O94929 683 aa22.11■■□□□ 1.13
PDLIM2-216ENST00000464275 ERVK-10P10266 1014 aa22.11■■□□□ 1.13
PDLIM2-216ENST00000464275 HNRNPDQ14103 355 aaKnown RBP22.11■■□□□ 1.13
PDLIM2-216ENST00000464275 TPGS2Q68CL5 300 aa22.11■■□□□ 1.13
PDLIM2-216ENST00000464275 SLC39A11Q8N1S5 342 aa22.11■■□□□ 1.13
PDLIM2-216ENST00000464275 ZNF461Q8TAF7 563 aa22.11■■□□□ 1.13
PDLIM2-216ENST00000464275 ACMSDQ8TDX5 336 aa22.11■■□□□ 1.13
PDLIM2-216ENST00000464275 SPOCK2Q92563 424 aa22.11■■□□□ 1.13
PDLIM2-216ENST00000464275 HMCESQ96FZ2 354 aa22.11■■□□□ 1.13
PDLIM2-216ENST00000464275 ZNF419Q96HQ0 510 aaPredicted RBP22.11■■□□□ 1.13
PDLIM2-216ENST00000464275 CPNE1Q99829 537 aa22.11■■□□□ 1.13
PDLIM2-216ENST00000464275 PLLPQ9Y342 182 aa22.11■■□□□ 1.13
PDLIM2-216ENST00000464275 PTPRSQ13332 1948 aa22.11■■□□□ 1.13
PDLIM2-216ENST00000464275 ZCWPW2A0A1B0GU75 182 aa22.1■■□□□ 1.13
PDLIM2-216ENST00000464275 WFS1O76024 890 aa22.1■■□□□ 1.13
PDLIM2-216ENST00000464275 GP5P40197 560 aa22.1■■□□□ 1.13
PDLIM2-216ENST00000464275 RENBPP51606 427 aa22.1■■□□□ 1.13
PDLIM2-216ENST00000464275 DSG1Q02413 1049 aa22.1■■□□□ 1.13
PDLIM2-216ENST00000464275 GRTP1Q5TC63 336 aa22.1■■□□□ 1.13
PDLIM2-216ENST00000464275 CCDC117Q8IWD4 279 aaPredicted RBP22.1■■□□□ 1.13
PDLIM2-216ENST00000464275 TMEM169Q96HH4 297 aa22.1■■□□□ 1.13
PDLIM2-216ENST00000464275 ZNF333Q96JL9 665 aa22.1■■□□□ 1.13
PDLIM2-216ENST00000464275 RPRD1AQ96P16 312 aaPredicted RBP22.1■■□□□ 1.13
PDLIM2-216ENST00000464275 ENTPD7Q9NQZ7 604 aa22.1■■□□□ 1.13
PDLIM2-216ENST00000464275 TXNDC16Q9P2K2 825 aa22.1■■□□□ 1.13
PDLIM2-216ENST00000464275 SLC17A6Q9P2U8 582 aa22.1■■□□□ 1.13
PDLIM2-216ENST00000464275 PLXNA4Q9HCM2 1894 aa22.1■■□□□ 1.13
PDLIM2-216ENST00000464275 WDR91A4D1P6 747 aa22.1■■□□□ 1.13
PDLIM2-216ENST00000464275 HNRNPCL1O60812 293 aaKnown RBP22.1■■□□□ 1.13
PDLIM2-216ENST00000464275 SEC24AO95486 1093 aa22.1■■□□□ 1.13
PDLIM2-216ENST00000464275 PEX11BO96011 259 aa22.1■■□□□ 1.13
PDLIM2-216ENST00000464275 MT-CYBP00156 380 aaPredicted RBP22.1■■□□□ 1.13
PDLIM2-216ENST00000464275 TPH1P17752 444 aa22.1■■□□□ 1.13
PDLIM2-216ENST00000464275 TACR2P21452 398 aa22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms