RNA–Protein interactions for RNA: ENST00000463818.1

SF3A1-205, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-205ENST00000463818 OR2A12Q8NGT7 310 aa19.31■□□□□ 0.68
SF3A1-205ENST00000463818 RXFP2Q8WXD0 754 aa19.31■□□□□ 0.68
SF3A1-205ENST00000463818 GBP4Q96PP9 640 aa19.31■□□□□ 0.68
SF3A1-205ENST00000463818 SPON2Q9BUD6 331 aa19.31■□□□□ 0.68
SF3A1-205ENST00000463818 RAB6CQ9H0N0 254 aa19.31■□□□□ 0.68
SF3A1-205ENST00000463818 ANO10Q9NW15 660 aa19.31■□□□□ 0.68
SF3A1-205ENST00000463818 DAAM1Q9Y4D1 1078 aa19.31■□□□□ 0.68
SF3A1-205ENST00000463818 ILVBLA1L0T0 632 aa19.3■□□□□ 0.68
SF3A1-205ENST00000463818 TNFSF14O43557 240 aa19.3■□□□□ 0.68
SF3A1-205ENST00000463818 CTSLP07711 333 aa19.3■□□□□ 0.68
SF3A1-205ENST00000463818 GLDCP23378 1020 aa19.3■□□□□ 0.68
SF3A1-205ENST00000463818 CHRNA3P32297 505 aa19.3■□□□□ 0.68
SF3A1-205ENST00000463818 SYCP1Q15431 976 aa19.3■□□□□ 0.68
SF3A1-205ENST00000463818 CCDC14Q49A88 953 aa19.3■□□□□ 0.68
SF3A1-205ENST00000463818 SLC45A4Q5BKX6 768 aa19.3■□□□□ 0.68
SF3A1-205ENST00000463818 NAPEPLDQ6IQ20 393 aa19.3■□□□□ 0.68
SF3A1-205ENST00000463818 CCNI2Q6ZMN8 369 aaPredicted RBP19.3■□□□□ 0.68
SF3A1-205ENST00000463818 GATAD2AQ86YP4 633 aa19.3■□□□□ 0.68
SF3A1-205ENST00000463818 TMIEQ8NEW7 156 aa19.3■□□□□ 0.68
SF3A1-205ENST00000463818 ZCCHC14Q8WYQ9 949 aaKnown RBP19.3■□□□□ 0.68
SF3A1-205ENST00000463818 PCMTD1Q96MG8 357 aaPredicted RBP19.3■□□□□ 0.68
SF3A1-205ENST00000463818 PCDHB18PQ96TA0 734 aa19.3■□□□□ 0.68
SF3A1-205ENST00000463818 C11orf70Q9BRQ4 267 aa19.3■□□□□ 0.68
SF3A1-205ENST00000463818 ZYG11BQ9C0D3 744 aa19.3■□□□□ 0.68
SF3A1-205ENST00000463818 GDF3Q9NR23 364 aa19.3■□□□□ 0.68
SF3A1-205ENST00000463818 ZNF212Q9UDV6 495 aa19.3■□□□□ 0.68
SF3A1-205ENST00000463818 LIMA1Q9UHB6 759 aaKnown RBP19.3■□□□□ 0.68
SF3A1-205ENST00000463818 GJB6O95452 261 aa19.29■□□□□ 0.68
SF3A1-205ENST00000463818 CDK11BP21127 795 aaKnown RBP19.29■□□□□ 0.68
SF3A1-205ENST00000463818 ADRA1BP35368 520 aa19.29■□□□□ 0.68
SF3A1-205ENST00000463818 CLCN6P51797 869 aa19.29■□□□□ 0.68
SF3A1-205ENST00000463818 NXPH1P58417 271 aa19.29■□□□□ 0.68
SF3A1-205ENST00000463818 SHBQ15464 509 aa19.29■□□□□ 0.68
SF3A1-205ENST00000463818 CDO1Q16878 200 aa19.29■□□□□ 0.68
SF3A1-205ENST00000463818 C15orf59Q2T9L4 293 aaPredicted RBP19.29■□□□□ 0.68
SF3A1-205ENST00000463818 ZNF783Q6ZMS7 281 aa19.29■□□□□ 0.68
SF3A1-205ENST00000463818 TRIM72Q6ZMU5 477 aa19.29■□□□□ 0.68
SF3A1-205ENST00000463818 MFSD2AQ8NA29 543 aa19.29■□□□□ 0.68
SF3A1-205ENST00000463818 CHST14Q8NCH0 376 aa19.29■□□□□ 0.68
SF3A1-205ENST00000463818 ANKRD20A12PQ8NF67 263 aa19.29■□□□□ 0.68
SF3A1-205ENST00000463818 NEK11Q8NG66 645 aa19.29■□□□□ 0.68
SF3A1-205ENST00000463818 JOSD2Q8TAC2 188 aa19.29■□□□□ 0.68
SF3A1-205ENST00000463818 CCDC114Q96M63 670 aa19.29■□□□□ 0.68
SF3A1-205ENST00000463818 TNKS2Q9H2K2 1166 aa19.29■□□□□ 0.68
SF3A1-205ENST00000463818 IGF2RP11717 2491 aa19.29■□□□□ 0.68
SF3A1-205ENST00000463818 LRRC10BA6NIK2 292 aa19.28■□□□□ 0.68
SF3A1-205ENST00000463818 C2CD4BA6NLJ0 364 aa19.28■□□□□ 0.68
SF3A1-205ENST00000463818 SRRM3A6NNA2 597 aaPredicted RBP19.28■□□□□ 0.68
SF3A1-205ENST00000463818 CBX4O00257 560 aa19.28■□□□□ 0.68
SF3A1-205ENST00000463818 KPNA3O00505 521 aaPredicted RBP19.28■□□□□ 0.68
SF3A1-205ENST00000463818 ZMPSTE24O75844 475 aa19.28■□□□□ 0.68
SF3A1-205ENST00000463818 DKK1O94907 266 aa19.28■□□□□ 0.68
SF3A1-205ENST00000463818 ITGAVP06756 1048 aa19.28■□□□□ 0.68
SF3A1-205ENST00000463818 UNGP13051 313 aaPredicted RBP19.28■□□□□ 0.68
SF3A1-205ENST00000463818 SDC4P31431 198 aa19.28■□□□□ 0.68
SF3A1-205ENST00000463818 NUDT1P36639 197 aa19.28■□□□□ 0.68
SF3A1-205ENST00000463818 TAS2R38P59533 333 aa19.28■□□□□ 0.68
SF3A1-205ENST00000463818 MYL5Q02045 173 aa19.28■□□□□ 0.68
SF3A1-205ENST00000463818 UBXN1Q04323 297 aa19.28■□□□□ 0.68
SF3A1-205ENST00000463818 SLC20A2Q08357 652 aa19.28■□□□□ 0.68
SF3A1-205ENST00000463818 INAVAQ3KP66 663 aa19.28■□□□□ 0.68
SF3A1-205ENST00000463818 ARL13BQ3SXY8 428 aa19.28■□□□□ 0.68
SF3A1-205ENST00000463818 TRIM69Q86WT6 500 aa19.28■□□□□ 0.68
SF3A1-205ENST00000463818 ARRDC3Q96B67 414 aa19.28■□□□□ 0.68
SF3A1-205ENST00000463818 ATP13A1Q9HD20 1204 aa19.28■□□□□ 0.68
SF3A1-205ENST00000463818 PPARGC1AQ9UBK2 798 aaKnown RBP19.28■□□□□ 0.68
SF3A1-205ENST00000463818 OR12D3Q9UGF7 316 aa19.28■□□□□ 0.68
SF3A1-205ENST00000463818 DMTF1Q9Y222 760 aa19.28■□□□□ 0.68
SF3A1-205ENST00000463818 AKAP13Q12802 2813 aa19.27■□□□□ 0.68
SF3A1-205ENST00000463818 LGALS16A8MUM7 142 aa19.27■□□□□ 0.68
SF3A1-205ENST00000463818 RNF103O00237 685 aa19.27■□□□□ 0.68
SF3A1-205ENST00000463818 RNGTTO60942 597 aaKnown RBP19.27■□□□□ 0.68
SF3A1-205ENST00000463818 PRNPP04156 253 aa19.27■□□□□ 0.68
SF3A1-205ENST00000463818 CAPNS1P04632 268 aa19.27■□□□□ 0.68
SF3A1-205ENST00000463818 KRT3P12035 628 aa19.27■□□□□ 0.68
SF3A1-205ENST00000463818 GNA12Q03113 381 aa19.27■□□□□ 0.68
SF3A1-205ENST00000463818 CCDC15Q0P6D6 951 aa19.27■□□□□ 0.68
SF3A1-205ENST00000463818 SCAPQ12770 1279 aa19.27■□□□□ 0.68
SF3A1-205ENST00000463818 PTP4A2Q12974 167 aa19.27■□□□□ 0.68
SF3A1-205ENST00000463818 STAT4Q14765 748 aa19.27■□□□□ 0.68
SF3A1-205ENST00000463818 STX1AQ16623 288 aa19.27■□□□□ 0.68
SF3A1-205ENST00000463818 CCDC157Q569K6 752 aa19.27■□□□□ 0.68
SF3A1-205ENST00000463818 ARSIQ5FYB1 569 aa19.27■□□□□ 0.68
SF3A1-205ENST00000463818 PIP5KL1Q5T9C9 394 aa19.27■□□□□ 0.68
SF3A1-205ENST00000463818 RETSATQ6NUM9 610 aa19.27■□□□□ 0.68
SF3A1-205ENST00000463818 C22orf39Q6P5X5 142 aa19.27■□□□□ 0.68
SF3A1-205ENST00000463818 DPY19L3Q6ZPD9 716 aa19.27■□□□□ 0.68
SF3A1-205ENST00000463818 TMPRSS7Q7RTY8 843 aa19.27■□□□□ 0.68
SF3A1-205ENST00000463818 DRC7Q8IY82 874 aa19.27■□□□□ 0.68
SF3A1-205ENST00000463818 SAP25Q8TEE9 199 aa19.27■□□□□ 0.68
SF3A1-205ENST00000463818 MAGEB5Q9BZ81 275 aa19.27■□□□□ 0.68
SF3A1-205ENST00000463818 OSBPL2Q9H1P3 480 aa19.27■□□□□ 0.68
SF3A1-205ENST00000463818 PREBQ9HCU5 417 aa19.27■□□□□ 0.68
SF3A1-205ENST00000463818 ADAM22Q9P0K1 906 aa19.27■□□□□ 0.68
SF3A1-205ENST00000463818 GOLGA6L22H0YM25 854 aa19.26■□□□□ 0.67
SF3A1-205ENST00000463818 ZNF821O75541 412 aaPredicted RBP19.26■□□□□ 0.67
SF3A1-205ENST00000463818 PTPN9P43378 593 aa19.26■□□□□ 0.67
SF3A1-205ENST00000463818 RECQLP46063 649 aaPredicted RBP19.26■□□□□ 0.67
SF3A1-205ENST00000463818 NSFP46459 744 aaKnown RBP19.26■□□□□ 0.67
SF3A1-205ENST00000463818 ARRB1P49407 418 aaPredicted RBP19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms