RNA–Protein interactions for RNA: ENST00000462482.1

SKA3-204, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-204ENST00000462482 NPY6RQ99463 290 aa15.76■□□□□ 0.11
SKA3-204ENST00000462482 SPON2Q9BUD6 331 aa15.76■□□□□ 0.11
SKA3-204ENST00000462482 NRSN2Q9GZP1 204 aa15.76■□□□□ 0.11
SKA3-204ENST00000462482 PLCB1Q9NQ66 1216 aa15.76■□□□□ 0.11
SKA3-204ENST00000462482 EVA1BQ9NVM1 165 aa15.76■□□□□ 0.11
SKA3-204ENST00000462482 ARHGEF38Q9NXL2 777 aa15.76■□□□□ 0.11
SKA3-204ENST00000462482 VPS51Q9UID3 782 aa15.76■□□□□ 0.11
SKA3-204ENST00000462482 ANKRD11Q6UB99 2663 aaPredicted RBP15.76■□□□□ 0.11
SKA3-204ENST00000462482 SPEGQ15772 3267 aa15.75■□□□□ 0.11
SKA3-204ENST00000462482 SNAP91O60641 907 aa15.75■□□□□ 0.11
SKA3-204ENST00000462482 CNTN5O94779 1100 aa15.75■□□□□ 0.11
SKA3-204ENST00000462482 HNRNPA2B1P22626 353 aaKnown RBP15.75■□□□□ 0.11
SKA3-204ENST00000462482 GLDCP23378 1020 aa15.75■□□□□ 0.11
SKA3-204ENST00000462482 RRM1P23921 792 aa15.75■□□□□ 0.11
SKA3-204ENST00000462482 OR1E1P30953 314 aa15.75■□□□□ 0.11
SKA3-204ENST00000462482 CLCN1P35523 988 aa15.75■□□□□ 0.11
SKA3-204ENST00000462482 SCNN1AP37088 669 aa15.75■□□□□ 0.11
SKA3-204ENST00000462482 SLC25A52Q3SY17 297 aa15.75■□□□□ 0.11
SKA3-204ENST00000462482 PIP5KL1Q5T9C9 394 aa15.75■□□□□ 0.11
SKA3-204ENST00000462482 FBXL19Q6PCT2 694 aa15.75■□□□□ 0.11
SKA3-204ENST00000462482 TFAP2DQ7Z6R9 452 aa15.75■□□□□ 0.11
SKA3-204ENST00000462482 HORMAD1Q86X24 394 aa15.75■□□□□ 0.11
SKA3-204ENST00000462482 FAM71AQ8IYT1 594 aa15.75■□□□□ 0.11
SKA3-204ENST00000462482 OR2A12Q8NGT7 310 aa15.75■□□□□ 0.11
SKA3-204ENST00000462482 FAM174AQ8TBP5 190 aa15.75■□□□□ 0.11
SKA3-204ENST00000462482 PGAP3Q96FM1 320 aaPredicted RBP15.75■□□□□ 0.11
SKA3-204ENST00000462482 C1orf74Q96LT6 269 aa15.75■□□□□ 0.11
SKA3-204ENST00000462482 MYOCQ99972 504 aa15.75■□□□□ 0.11
SKA3-204ENST00000462482 CALN1Q9BXU9 219 aa15.75■□□□□ 0.11
SKA3-204ENST00000462482 NDST4Q9H3R1 872 aa15.75■□□□□ 0.11
SKA3-204ENST00000462482 KLHL11Q9NVR0 708 aa15.75■□□□□ 0.11
SKA3-204ENST00000462482 IL36AQ9UHA7 158 aa15.75■□□□□ 0.11
SKA3-204ENST00000462482 DACH1Q9UI36 760 aa15.75■□□□□ 0.11
SKA3-204ENST00000462482 CLCA2Q9UQC9 943 aa15.75■□□□□ 0.11
SKA3-204ENST00000462482 NUMA1Q14980 2115 aa15.74■□□□□ 0.11
SKA3-204ENST00000462482 DRGXA6NNA5 263 aa15.74■□□□□ 0.11
SKA3-204ENST00000462482 SRGAP2O75044 1071 aa15.74■□□□□ 0.11
SKA3-204ENST00000462482 MT-CO1P00395 513 aa15.74■□□□□ 0.11
SKA3-204ENST00000462482 PRLRP16471 622 aa15.74■□□□□ 0.11
SKA3-204ENST00000462482 DNA2P51530 1060 aa15.74■□□□□ 0.11
SKA3-204ENST00000462482 CLDN6P56747 220 aa15.74■□□□□ 0.11
SKA3-204ENST00000462482 SLC20A2Q08357 652 aa15.74■□□□□ 0.11
SKA3-204ENST00000462482 KCNMA1Q12791 1236 aa15.74■□□□□ 0.11
SKA3-204ENST00000462482 ZNF211Q13398 564 aaPredicted RBP15.74■□□□□ 0.11
SKA3-204ENST00000462482 VWA3BQ502W6 1294 aa15.74■□□□□ 0.11
SKA3-204ENST00000462482 ALFQ53S48 1182 aa15.74■□□□□ 0.11
SKA3-204ENST00000462482 ZNF783Q6ZMS7 281 aa15.74■□□□□ 0.11
SKA3-204ENST00000462482 ERN2Q76MJ5 926 aaKnown RBP15.74■□□□□ 0.11
SKA3-204ENST00000462482 GRIN3AQ8TCU5 1115 aa15.74■□□□□ 0.11
SKA3-204ENST00000462482 KLK6Q92876 244 aa15.74■□□□□ 0.11
SKA3-204ENST00000462482 TBCBQ99426 244 aa15.74■□□□□ 0.11
SKA3-204ENST00000462482 SIX2Q9NPC8 291 aa15.74■□□□□ 0.11
SKA3-204ENST00000462482 CA5BQ9Y2D0 317 aa15.74■□□□□ 0.11
SKA3-204ENST00000462482 ILVBLA1L0T0 632 aa15.73■□□□□ 0.11
SKA3-204ENST00000462482 NEMP2A6NFY4 417 aa15.73■□□□□ 0.11
SKA3-204ENST00000462482 GOLGA8SH3BPF8 625 aa15.73■□□□□ 0.11
SKA3-204ENST00000462482 K7ERQ8 282 aa15.73■□□□□ 0.11
SKA3-204ENST00000462482 SIGLEC6O43699 453 aa15.73■□□□□ 0.11
SKA3-204ENST00000462482 LSM8O95777 96 aaKnown RBP15.73■□□□□ 0.11
SKA3-204ENST00000462482 PNMA6AP0CW24 399 aaPredicted RBP15.73■□□□□ 0.11
SKA3-204ENST00000462482 ACP1P24666 158 aa15.73■□□□□ 0.11
SKA3-204ENST00000462482 ACTN2P35609 894 aa15.73■□□□□ 0.11
SKA3-204ENST00000462482 NEK3P51956 506 aa15.73■□□□□ 0.11
SKA3-204ENST00000462482 TAS2R38P59533 333 aa15.73■□□□□ 0.11
SKA3-204ENST00000462482 DRAP1Q14919 205 aaPredicted RBP15.73■□□□□ 0.11
SKA3-204ENST00000462482 ARSIQ5FYB1 569 aa15.73■□□□□ 0.11
SKA3-204ENST00000462482 TAF3Q5VWG9 929 aa15.73■□□□□ 0.11
SKA3-204ENST00000462482 C22orf39Q6P5X5 142 aa15.73■□□□□ 0.11
SKA3-204ENST00000462482 LINGO4Q6UY18 593 aa15.73■□□□□ 0.11
SKA3-204ENST00000462482 KANSL1Q7Z3B3 1105 aa15.73■□□□□ 0.11
SKA3-204ENST00000462482 DCP2Q8IU60 420 aaKnown RBP15.73■□□□□ 0.11
SKA3-204ENST00000462482 IRF2BP1Q8IU81 584 aa15.73■□□□□ 0.11
SKA3-204ENST00000462482 CACTIN-AS1Q8N1I8 211 aa15.73■□□□□ 0.11
SKA3-204ENST00000462482 TMEM145Q8NBT3 493 aa15.73■□□□□ 0.11
SKA3-204ENST00000462482 ARRDC3Q96B67 414 aa15.73■□□□□ 0.11
SKA3-204ENST00000462482 FEM1CQ96JP0 617 aa15.73■□□□□ 0.11
SKA3-204ENST00000462482 PSMB7Q99436 277 aa15.73■□□□□ 0.11
SKA3-204ENST00000462482 TUBGCP2Q9BSJ2 902 aa15.73■□□□□ 0.11
SKA3-204ENST00000462482 HDAC8Q9BY41 377 aa15.73■□□□□ 0.11
SKA3-204ENST00000462482 ZYG11BQ9C0D3 744 aa15.73■□□□□ 0.11
SKA3-204ENST00000462482 TNKS2Q9H2K2 1166 aa15.73■□□□□ 0.11
SKA3-204ENST00000462482 ATP13A1Q9HD20 1204 aa15.73■□□□□ 0.11
SKA3-204ENST00000462482 MPP6Q9NZW5 540 aa15.73■□□□□ 0.11
SKA3-204ENST00000462482 DSPP15924 2871 aaKnown RBP15.72■□□□□ 0.11
SKA3-204ENST00000462482 A0A0D9SEW6 157 aa15.72■□□□□ 0.11
SKA3-204ENST00000462482 A6NNZ2 444 aa15.72■□□□□ 0.11
SKA3-204ENST00000462482 FFAR2O15552 330 aa15.72■□□□□ 0.11
SKA3-204ENST00000462482 ENDOD1O94919 500 aa15.72■□□□□ 0.11
SKA3-204ENST00000462482 CTSLP07711 333 aa15.72■□□□□ 0.11
SKA3-204ENST00000462482 CYP11B1P15538 503 aa15.72■□□□□ 0.11
SKA3-204ENST00000462482 DGKAP23743 735 aa15.72■□□□□ 0.11
SKA3-204ENST00000462482 CDH5P33151 784 aaPredicted RBP15.72■□□□□ 0.11
SKA3-204ENST00000462482 ETFBP38117 255 aa15.72■□□□□ 0.11
SKA3-204ENST00000462482 GABRB2P47870 512 aa15.72■□□□□ 0.11
SKA3-204ENST00000462482 DUSP3P51452 185 aaPredicted RBP15.72■□□□□ 0.11
SKA3-204ENST00000462482 RTP5Q14D33 572 aa15.72■□□□□ 0.11
SKA3-204ENST00000462482 ZNF284Q2VY69 593 aa15.72■□□□□ 0.11
SKA3-204ENST00000462482 PROX2Q3B8N5 592 aa15.72■□□□□ 0.11
SKA3-204ENST00000462482 ARL13BQ3SXY8 428 aa15.72■□□□□ 0.11
SKA3-204ENST00000462482 OTUD1Q5VV17 481 aaPredicted RBP15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms