RNA–Protein interactions for RNA: ENST00000462267.1

APP-211, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 667 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-211ENST00000462267 PDGFRAP16234 1089 aa15.66■□□□□ 0.1
APP-211ENST00000462267 JUNDP17535 347 aa15.66■□□□□ 0.1
APP-211ENST00000462267 NASPP49321 788 aaPredicted RBP15.66■□□□□ 0.1
APP-211ENST00000462267 NUCB2P80303 420 aa15.66■□□□□ 0.1
APP-211ENST00000462267 STK4Q13043 487 aa15.66■□□□□ 0.1
APP-211ENST00000462267 DRAP1Q14919 205 aaPredicted RBP15.66■□□□□ 0.1
APP-211ENST00000462267 DLG2Q15700 870 aa15.66■□□□□ 0.1
APP-211ENST00000462267 UBA3Q8TBC4 463 aa15.66■□□□□ 0.1
APP-211ENST00000462267 LMX1AQ8TE12 382 aa15.66■□□□□ 0.1
APP-211ENST00000462267 CCDC3Q9BQI4 270 aa15.66■□□□□ 0.1
APP-211ENST00000462267 FUCA2Q9BTY2 467 aa15.66■□□□□ 0.1
APP-211ENST00000462267 IPO11Q9UI26 975 aaKnown RBP15.66■□□□□ 0.1
APP-211ENST00000462267 SLC25A13Q9UJS0 675 aa15.66■□□□□ 0.1
APP-211ENST00000462267 ZFR2Q9UPR6 939 aaKnown RBP15.66■□□□□ 0.1
APP-211ENST00000462267 MOCS2O96007 188 aaPredicted RBP15.65■□□□□ 0.1
APP-211ENST00000462267 PRR29P0C7W0 189 aa15.65■□□□□ 0.1
APP-211ENST00000462267 KRT13P13646 458 aa15.65■□□□□ 0.1
APP-211ENST00000462267 GTF2H1P32780 548 aa15.65■□□□□ 0.1
APP-211ENST00000462267 CASRP41180 1078 aa15.65■□□□□ 0.1
APP-211ENST00000462267 RABIFP47224 123 aa15.65■□□□□ 0.1
APP-211ENST00000462267 CUL4BQ13620 913 aa15.65■□□□□ 0.1
APP-211ENST00000462267 STK38Q15208 465 aa15.65■□□□□ 0.1
APP-211ENST00000462267 IGFBP7Q16270 282 aa15.65■□□□□ 0.1
APP-211ENST00000462267 SKIDA1Q1XH10 827 aa15.65■□□□□ 0.1
APP-211ENST00000462267 TMEM259Q4ZIN3 620 aa15.65■□□□□ 0.1
APP-211ENST00000462267 KRT39Q6A163 491 aa15.65■□□□□ 0.1
APP-211ENST00000462267 Q6ZVU0 165 aa15.65■□□□□ 0.1
APP-211ENST00000462267 PTRH1Q86Y79 214 aaKnown RBP15.65■□□□□ 0.1
APP-211ENST00000462267 SLC35F3Q8IY50 421 aa15.65■□□□□ 0.1
APP-211ENST00000462267 KIAA0895Q8NCT3 520 aa15.65■□□□□ 0.1
APP-211ENST00000462267 BTN2A2Q8WVV5 523 aa15.65■□□□□ 0.1
APP-211ENST00000462267 SYNDIG1Q9H7V2 258 aa15.65■□□□□ 0.1
APP-211ENST00000462267 MMRN2Q9H8L6 949 aa15.65■□□□□ 0.1
APP-211ENST00000462267 LRRC4CQ9HCJ2 640 aa15.65■□□□□ 0.1
APP-211ENST00000462267 EPB41L5Q9HCM4 733 aa15.65■□□□□ 0.1
APP-211ENST00000462267 SPASTQ9UBP0 616 aa15.65■□□□□ 0.1
APP-211ENST00000462267 KLF15Q9UIH9 416 aa15.65■□□□□ 0.1
APP-211ENST00000462267 ANAPC2Q9UJX6 822 aa15.65■□□□□ 0.1
APP-211ENST00000462267 FARP1Q9Y4F1 1045 aaPredicted RBP15.65■□□□□ 0.1
APP-211ENST00000462267 PCDHB11Q9Y5F2 797 aa15.65■□□□□ 0.1
APP-211ENST00000462267 BLACEA4D250 179 aa15.64■□□□□ 0.09
APP-211ENST00000462267 POM121BA6NF01 834 aa15.64■□□□□ 0.09
APP-211ENST00000462267 KPNA3O00505 521 aaPredicted RBP15.64■□□□□ 0.09
APP-211ENST00000462267 CASC3O15234 703 aaKnown RBP15.64■□□□□ 0.09
APP-211ENST00000462267 UTP20O75691 2785 aaKnown RBP15.64■□□□□ 0.09
APP-211ENST00000462267 JMJD7P0C870 316 aa15.64■□□□□ 0.09
APP-211ENST00000462267 PDIA4P13667 645 aaKnown RBP15.64■□□□□ 0.09
APP-211ENST00000462267 TACR2P21452 398 aa15.64■□□□□ 0.09
APP-211ENST00000462267 NUMBP49757 651 aa15.64■□□□□ 0.09
APP-211ENST00000462267 RAP1GAP2Q684P5 730 aa15.64■□□□□ 0.09
APP-211ENST00000462267 SEL1L3Q68CR1 1132 aa15.64■□□□□ 0.09
APP-211ENST00000462267 B3GNT8Q7Z7M8 397 aa15.64■□□□□ 0.09
APP-211ENST00000462267 VASH2Q86V25 355 aa15.64■□□□□ 0.09
APP-211ENST00000462267 CHSY1Q86X52 802 aa15.64■□□□□ 0.09
APP-211ENST00000462267 CCAR2Q8N163 923 aaKnown RBP15.64■□□□□ 0.09
APP-211ENST00000462267 LINC00301Q8NCQ3 95 aa15.64■□□□□ 0.09
APP-211ENST00000462267 TMIEQ8NEW7 156 aa15.64■□□□□ 0.09
APP-211ENST00000462267 DQX1Q8TE96 717 aaKnown RBP15.64■□□□□ 0.09
APP-211ENST00000462267 HTR3CQ8WXA8 447 aa15.64■□□□□ 0.09
APP-211ENST00000462267 SEMA4DQ92854 862 aa15.64■□□□□ 0.09
APP-211ENST00000462267 RNF34Q969K3 372 aa15.64■□□□□ 0.09
APP-211ENST00000462267 SLC17A9Q9BYT1 436 aa15.64■□□□□ 0.09
APP-211ENST00000462267 DYRK4Q9NR20 520 aa15.64■□□□□ 0.09
APP-211ENST00000462267 XPO7Q9UIA9 1087 aaKnown RBP15.64■□□□□ 0.09
APP-211ENST00000462267 TUBD1Q9UJT1 453 aa15.64■□□□□ 0.09
APP-211ENST00000462267 KIAA1257Q9ULG3 409 aa15.64■□□□□ 0.09
APP-211ENST00000462267 PADI4Q9UM07 663 aa15.64■□□□□ 0.09
APP-211ENST00000462267 LMO7DNF2Z398 122 aa15.63■□□□□ 0.09
APP-211ENST00000462267 F5H5T6 163 aa15.63■□□□□ 0.09
APP-211ENST00000462267 O00370 1275 aa15.63■□□□□ 0.09
APP-211ENST00000462267 POLR2DO15514 142 aaKnown RBP15.63■□□□□ 0.09
APP-211ENST00000462267 CALUO43852 315 aaPredicted RBP15.63■□□□□ 0.09
APP-211ENST00000462267 BNIP3LO60238 219 aa15.63■□□□□ 0.09
APP-211ENST00000462267 PPP6R2O75170 966 aa15.63■□□□□ 0.09
APP-211ENST00000462267 GABBR2O75899 941 aa15.63■□□□□ 0.09
APP-211ENST00000462267 FBXO21O94952 628 aa15.63■□□□□ 0.09
APP-211ENST00000462267 APOEP02649 317 aa15.63■□□□□ 0.09
APP-211ENST00000462267 VDRP11473 427 aa15.63■□□□□ 0.09
APP-211ENST00000462267 CD19P15391 556 aa15.63■□□□□ 0.09
APP-211ENST00000462267 CCKBRP32239 447 aa15.63■□□□□ 0.09
APP-211ENST00000462267 CHRNA3P32297 505 aa15.63■□□□□ 0.09
APP-211ENST00000462267 CYP4F2P78329 520 aa15.63■□□□□ 0.09
APP-211ENST00000462267 NCAPHQ15003 741 aa15.63■□□□□ 0.09
APP-211ENST00000462267 TTC39BQ5VTQ0 682 aaPredicted RBP15.63■□□□□ 0.09
APP-211ENST00000462267 ESRP1Q6NXG1 681 aaKnown RBP15.63■□□□□ 0.09
APP-211ENST00000462267 BORAQ6PGQ7 559 aa15.63■□□□□ 0.09
APP-211ENST00000462267 ERN2Q76MJ5 926 aaKnown RBP15.63■□□□□ 0.09
APP-211ENST00000462267 SH2D3CQ8N5H7 860 aa15.63■□□□□ 0.09
APP-211ENST00000462267 FBXL13Q8NEE6 735 aa15.63■□□□□ 0.09
APP-211ENST00000462267 SLC35F5Q8WV83 523 aa15.63■□□□□ 0.09
APP-211ENST00000462267 BTN2A3PQ96KV6 586 aa15.63■□□□□ 0.09
APP-211ENST00000462267 CCDC114Q96M63 670 aa15.63■□□□□ 0.09
APP-211ENST00000462267 TMEM74Q96NL1 305 aa15.63■□□□□ 0.09
APP-211ENST00000462267 GFM1Q96RP9 751 aaKnown RBP15.63■□□□□ 0.09
APP-211ENST00000462267 HDAC8Q9BY41 377 aa15.63■□□□□ 0.09
APP-211ENST00000462267 EXOC1Q9NV70 894 aa15.63■□□□□ 0.09
APP-211ENST00000462267 RAB20Q9NX57 234 aa15.63■□□□□ 0.09
APP-211ENST00000462267 KCNK4Q9NYG8 393 aa15.63■□□□□ 0.09
APP-211ENST00000462267 TRAF3IP3Q9Y228 551 aa15.63■□□□□ 0.09
APP-211ENST00000462267 TCAF2A6NFQ2 919 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms