RNA–Protein interactions for RNA: ENST00000461574.1

BRCA1-206, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 726 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-206ENST00000461574 EGR3Q06889 387 aa5.28□□□□□ -1.56
BRCA1-206ENST00000461574 KCNA1Q09470 495 aa5.28□□□□□ -1.56
BRCA1-206ENST00000461574 DNAJC3Q13217 504 aa5.28□□□□□ -1.56
BRCA1-206ENST00000461574 TRPC3Q13507 836 aa5.28□□□□□ -1.56
BRCA1-206ENST00000461574 ALCAMQ13740 583 aa5.28□□□□□ -1.56
BRCA1-206ENST00000461574 ZNF234Q14588 700 aa5.28□□□□□ -1.56
BRCA1-206ENST00000461574 GEN1Q17RS7 908 aa5.28□□□□□ -1.56
BRCA1-206ENST00000461574 WDR72Q3MJ13 1102 aa5.28□□□□□ -1.56
BRCA1-206ENST00000461574 TTC31Q49AM3 519 aaPredicted RBP5.28□□□□□ -1.56
BRCA1-206ENST00000461574 HES3Q5TGS1 186 aa5.28□□□□□ -1.56
BRCA1-206ENST00000461574 SLC6A19Q695T7 634 aa5.28□□□□□ -1.56
BRCA1-206ENST00000461574 DBX2Q6ZNG2 339 aa5.28□□□□□ -1.56
BRCA1-206ENST00000461574 STXBP4Q6ZWJ1 553 aa5.28□□□□□ -1.56
BRCA1-206ENST00000461574 USP49Q70CQ1 688 aa5.28□□□□□ -1.56
BRCA1-206ENST00000461574 HTR3DQ70Z44 454 aa5.28□□□□□ -1.56
BRCA1-206ENST00000461574 ANKS1BQ7Z6G8 1248 aa5.28□□□□□ -1.56
BRCA1-206ENST00000461574 GATAD2AQ86YP4 633 aa5.28□□□□□ -1.56
BRCA1-206ENST00000461574 WDR49Q8IV35 697 aa5.28□□□□□ -1.56
BRCA1-206ENST00000461574 ZNF248Q8NDW4 579 aa5.28□□□□□ -1.56
BRCA1-206ENST00000461574 ZSWIM2Q8NEG5 633 aa5.28□□□□□ -1.56
BRCA1-206ENST00000461574 OR5B17Q8NGF7 314 aa5.28□□□□□ -1.56
BRCA1-206ENST00000461574 SCAMP5Q8TAC9 235 aa5.28□□□□□ -1.56
BRCA1-206ENST00000461574 GANCQ8TET4 914 aa5.28□□□□□ -1.56
BRCA1-206ENST00000461574 WBP2Q969T9 261 aa5.28□□□□□ -1.56
BRCA1-206ENST00000461574 JAKMIP2Q96AA8 810 aa5.28□□□□□ -1.56
BRCA1-206ENST00000461574 TMEM176AQ96HP8 235 aa5.28□□□□□ -1.56
BRCA1-206ENST00000461574 NAF1Q96HR8 494 aaKnown RBP5.28□□□□□ -1.56
BRCA1-206ENST00000461574 FIZ1Q96SL8 496 aa5.28□□□□□ -1.56
BRCA1-206ENST00000461574 KCNK16Q96T55 309 aa5.28□□□□□ -1.56
BRCA1-206ENST00000461574 DUSP9Q99956 384 aaKnown RBP5.28□□□□□ -1.56
BRCA1-206ENST00000461574 CBWD1Q9BRT8 395 aa5.28□□□□□ -1.56
BRCA1-206ENST00000461574 B3GNT5Q9BYG0 378 aa5.28□□□□□ -1.56
BRCA1-206ENST00000461574 BTBD1Q9H0C5 482 aa5.28□□□□□ -1.56
BRCA1-206ENST00000461574 LHX5Q9H2C1 402 aa5.28□□□□□ -1.56
BRCA1-206ENST00000461574 FBXO44Q9H4M3 255 aa5.28□□□□□ -1.56
BRCA1-206ENST00000461574 TM9SF3Q9HD45 589 aa5.28□□□□□ -1.56
BRCA1-206ENST00000461574 BLOC1S4Q9NUP1 217 aa5.28□□□□□ -1.56
BRCA1-206ENST00000461574 INTS13Q9NVM9 706 aa5.28□□□□□ -1.56
BRCA1-206ENST00000461574 DUSP13Q9UII6 198 aa5.28□□□□□ -1.56
BRCA1-206ENST00000461574 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.28□□□□□ -1.56
BRCA1-206ENST00000461574 PCDHGA1Q9Y5H4 931 aa5.28□□□□□ -1.56
BRCA1-206ENST00000461574 KNL1Q8NG31 2342 aa5.28□□□□□ -1.56
BRCA1-206ENST00000461574 NUMA1Q14980 2115 aa5.27□□□□□ -1.57
BRCA1-206ENST00000461574 COL6A6A6NMZ7 2263 aa5.27□□□□□ -1.57
BRCA1-206ENST00000461574 SPTA1P02549 2419 aa5.27□□□□□ -1.57
BRCA1-206ENST00000461574 CYSRT1A8MQ03 144 aa5.27□□□□□ -1.57
BRCA1-206ENST00000461574 CBX4O00257 560 aa5.27□□□□□ -1.57
BRCA1-206ENST00000461574 KIAA0391O15091 583 aaKnown RBP5.27□□□□□ -1.57
BRCA1-206ENST00000461574 SLC28A2O43868 658 aa5.27□□□□□ -1.57
BRCA1-206ENST00000461574 TACC1O75410 805 aa5.27□□□□□ -1.57
BRCA1-206ENST00000461574 TBX18O95935 607 aa5.27□□□□□ -1.57
BRCA1-206ENST00000461574 C1SP09871 688 aa5.27□□□□□ -1.57
BRCA1-206ENST00000461574 PRKCHP24723 683 aa5.27□□□□□ -1.57
BRCA1-206ENST00000461574 CD27P26842 260 aa5.27□□□□□ -1.57
BRCA1-206ENST00000461574 ACSL1P33121 698 aa5.27□□□□□ -1.57
BRCA1-206ENST00000461574 CHKAP35790 457 aa5.27□□□□□ -1.57
BRCA1-206ENST00000461574 LONP1P36776 959 aaKnown RBP5.27□□□□□ -1.57
BRCA1-206ENST00000461574 ARRB1P49407 418 aaPredicted RBP5.27□□□□□ -1.57
BRCA1-206ENST00000461574 COPAP53621 1224 aa5.27□□□□□ -1.57
BRCA1-206ENST00000461574 MFAP3P55082 362 aa5.27□□□□□ -1.57
BRCA1-206ENST00000461574 TLE3Q04726 772 aa5.27□□□□□ -1.57
BRCA1-206ENST00000461574 PTPN13Q12923 2485 aa5.27□□□□□ -1.57
BRCA1-206ENST00000461574 RTP5Q14D33 572 aa5.27□□□□□ -1.57
BRCA1-206ENST00000461574 EIF4HQ15056 248 aaKnown RBP5.27□□□□□ -1.57
BRCA1-206ENST00000461574 FNDC3BQ53EP0 1204 aaKnown RBP5.27□□□□□ -1.57
BRCA1-206ENST00000461574 C10orf120Q5SQS8 335 aa5.27□□□□□ -1.57
BRCA1-206ENST00000461574 ARHGAP40Q5TG30 622 aa5.27□□□□□ -1.57
BRCA1-206ENST00000461574 SNX30Q5VWJ9 437 aa5.27□□□□□ -1.57
BRCA1-206ENST00000461574 SCARA5Q6ZMJ2 495 aa5.27□□□□□ -1.57
BRCA1-206ENST00000461574 TRAPPC11Q7Z392 1133 aa5.27□□□□□ -1.57
BRCA1-206ENST00000461574 TADA2BQ86TJ2 420 aa5.27□□□□□ -1.57
BRCA1-206ENST00000461574 TSPYL5Q86VY4 417 aaPredicted RBP5.27□□□□□ -1.57
BRCA1-206ENST00000461574 IRF2BP1Q8IU81 584 aa5.27□□□□□ -1.57
BRCA1-206ENST00000461574 MCATQ8IVS2 390 aaKnown RBP5.27□□□□□ -1.57
BRCA1-206ENST00000461574 EID2Q8N6I1 236 aa5.27□□□□□ -1.57
BRCA1-206ENST00000461574 OR2T3Q8NH03 318 aa5.27□□□□□ -1.57
BRCA1-206ENST00000461574 CXorf38Q8TB03 319 aa5.27□□□□□ -1.57
BRCA1-206ENST00000461574 CCDC127Q96BQ5 260 aa5.27□□□□□ -1.57
BRCA1-206ENST00000461574 BIRC7Q96CA5 298 aa5.27□□□□□ -1.57
BRCA1-206ENST00000461574 TNIP3Q96KP6 325 aa5.27□□□□□ -1.57
BRCA1-206ENST00000461574 ZSCAN31Q96LW9 406 aaPredicted RBP5.27□□□□□ -1.57
BRCA1-206ENST00000461574 TRIT1Q9H3H1 467 aaKnown RBP5.27□□□□□ -1.57
BRCA1-206ENST00000461574 C6orf106Q9H6K1 298 aaPredicted RBP5.27□□□□□ -1.57
BRCA1-206ENST00000461574 AASDHPPTQ9NRN7 309 aa5.27□□□□□ -1.57
BRCA1-206ENST00000461574 TMEM30AQ9NV96 361 aa5.27□□□□□ -1.57
BRCA1-206ENST00000461574 GPATCH2Q9NW75 528 aa5.27□□□□□ -1.57
BRCA1-206ENST00000461574 COMMD8Q9NX08 183 aa5.27□□□□□ -1.57
BRCA1-206ENST00000461574 NYNRINQ9P2P1 1898 aaKnown RBP5.27□□□□□ -1.57
BRCA1-206ENST00000461574 THAP10Q9P2Z0 257 aaPredicted RBP5.27□□□□□ -1.57
BRCA1-206ENST00000461574 PLA2G4CQ9UP65 541 aa5.27□□□□□ -1.57
BRCA1-206ENST00000461574 CLCA2Q9UQC9 943 aa5.27□□□□□ -1.57
BRCA1-206ENST00000461574 NCKAP1Q9Y2A7 1128 aa5.27□□□□□ -1.57
BRCA1-206ENST00000461574 HEMK1Q9Y5R4 338 aaPredicted RBP5.27□□□□□ -1.57
BRCA1-206ENST00000461574 SLCO1B1Q9Y6L6 691 aa5.27□□□□□ -1.57
BRCA1-206ENST00000461574 FLNCQ14315 2725 aa5.27□□□□□ -1.57
BRCA1-206ENST00000461574 UTP20O75691 2785 aaKnown RBP5.27□□□□□ -1.57
BRCA1-206ENST00000461574 KNTC1P50748 2209 aa5.26□□□□□ -1.57
BRCA1-206ENST00000461574 A0A1B0GTQ1 180 aa5.26□□□□□ -1.57
BRCA1-206ENST00000461574 MDM4O15151 490 aa5.26□□□□□ -1.57
BRCA1-206ENST00000461574 YKT6O15498 198 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms