RNA–Protein interactions for RNA: ENST00000461553.1

USP4-206, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 4

Gene USP4, Length 544 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-206ENST00000461553 CD38P28907 300 aa14.28□□□□□ -0.12
USP4-206ENST00000461553 NUDT1P36639 197 aa14.28□□□□□ -0.12
USP4-206ENST00000461553 GRK6P43250 576 aa14.28□□□□□ -0.12
USP4-206ENST00000461553 PTPN9P43378 593 aa14.28□□□□□ -0.12
USP4-206ENST00000461553 RECQLP46063 649 aaPredicted RBP14.28□□□□□ -0.12
USP4-206ENST00000461553 TYRO3Q06418 890 aa14.28□□□□□ -0.12
USP4-206ENST00000461553 C15orf59Q2T9L4 293 aaPredicted RBP14.28□□□□□ -0.12
USP4-206ENST00000461553 AGBL4Q5VU57 503 aa14.28□□□□□ -0.12
USP4-206ENST00000461553 NAPEPLDQ6IQ20 393 aa14.28□□□□□ -0.12
USP4-206ENST00000461553 RETSATQ6NUM9 610 aa14.28□□□□□ -0.12
USP4-206ENST00000461553 STRADAQ7RTN6 431 aa14.28□□□□□ -0.12
USP4-206ENST00000461553 PHLDB2Q86SQ0 1253 aa14.28□□□□□ -0.12
USP4-206ENST00000461553 GLRX5Q86SX6 157 aa14.28□□□□□ -0.12
USP4-206ENST00000461553 PRPF39Q86UA1 669 aaKnown RBP14.28□□□□□ -0.12
USP4-206ENST00000461553 OR7D4Q8NG98 312 aa14.28□□□□□ -0.12
USP4-206ENST00000461553 BAHD1Q8TBE0 780 aaPredicted RBP14.28□□□□□ -0.12
USP4-206ENST00000461553 RHBDD1Q8TEB9 315 aa14.28□□□□□ -0.12
USP4-206ENST00000461553 RXFP2Q8WXD0 754 aa14.28□□□□□ -0.12
USP4-206ENST00000461553 FAM131CQ96AQ9 280 aa14.28□□□□□ -0.12
USP4-206ENST00000461553 SERAC1Q96JX3 654 aa14.28□□□□□ -0.12
USP4-206ENST00000461553 CDC6Q99741 560 aa14.28□□□□□ -0.12
USP4-206ENST00000461553 ATP13A1Q9HD20 1204 aa14.28□□□□□ -0.12
USP4-206ENST00000461553 DYRK4Q9NR20 520 aa14.28□□□□□ -0.12
USP4-206ENST00000461553 ADAM22Q9P0K1 906 aa14.28□□□□□ -0.12
USP4-206ENST00000461553 PPARGC1AQ9UBK2 798 aaKnown RBP14.28□□□□□ -0.12
USP4-206ENST00000461553 KLK13Q9UKR3 277 aa14.28□□□□□ -0.12
USP4-206ENST00000461553 SARDHQ9UL12 918 aa14.28□□□□□ -0.12
USP4-206ENST00000461553 C2CD4BA6NLJ0 364 aa14.27□□□□□ -0.13
USP4-206ENST00000461553 CBX4O00257 560 aa14.27□□□□□ -0.13
USP4-206ENST00000461553 KPNA3O00505 521 aaPredicted RBP14.27□□□□□ -0.13
USP4-206ENST00000461553 LATO43561 262 aa14.27□□□□□ -0.13
USP4-206ENST00000461553 PCDHGA12O60330 932 aa14.27□□□□□ -0.13
USP4-206ENST00000461553 PRNPP04156 253 aa14.27□□□□□ -0.13
USP4-206ENST00000461553 CCDC172P0C7W6 258 aa14.27□□□□□ -0.13
USP4-206ENST00000461553 KRT3P12035 628 aa14.27□□□□□ -0.13
USP4-206ENST00000461553 ETFBP38117 255 aa14.27□□□□□ -0.13
USP4-206ENST00000461553 IL9RQ01113 521 aa14.27□□□□□ -0.13
USP4-206ENST00000461553 CCDC15Q0P6D6 951 aa14.27□□□□□ -0.13
USP4-206ENST00000461553 CNTN1Q12860 1018 aa14.27□□□□□ -0.13
USP4-206ENST00000461553 CLEC16AQ2KHT3 1053 aa14.27□□□□□ -0.13
USP4-206ENST00000461553 CCDC14Q49A88 953 aa14.27□□□□□ -0.13
USP4-206ENST00000461553 SETMARQ53H47 684 aaPredicted RBP14.27□□□□□ -0.13
USP4-206ENST00000461553 RWDD4Q6NW29 188 aaKnown RBP14.27□□□□□ -0.13
USP4-206ENST00000461553 LINGO4Q6UY18 593 aa14.27□□□□□ -0.13
USP4-206ENST00000461553 RAB44Q7Z6P3 723 aaPredicted RBP14.27□□□□□ -0.13
USP4-206ENST00000461553 TRIM69Q86WT6 500 aa14.27□□□□□ -0.13
USP4-206ENST00000461553 PHF13Q86YI8 300 aaPredicted RBP14.27□□□□□ -0.13
USP4-206ENST00000461553 DRC7Q8IY82 874 aa14.27□□□□□ -0.13
USP4-206ENST00000461553 CHCHD4Q8N4Q1 142 aa14.27□□□□□ -0.13
USP4-206ENST00000461553 C3orf20Q8ND61 904 aa14.27□□□□□ -0.13
USP4-206ENST00000461553 JOSD2Q8TAC2 188 aa14.27□□□□□ -0.13
USP4-206ENST00000461553 GRIN3AQ8TCU5 1115 aa14.27□□□□□ -0.13
USP4-206ENST00000461553 FAM172AQ8WUF8 416 aa14.27□□□□□ -0.13
USP4-206ENST00000461553 ADAMTS14Q8WXS8 1223 aa14.27□□□□□ -0.13
USP4-206ENST00000461553 GATA6Q92908 595 aa14.27□□□□□ -0.13
USP4-206ENST00000461553 PPP1R16AQ96I34 528 aa14.27□□□□□ -0.13
USP4-206ENST00000461553 SPON2Q9BUD6 331 aa14.27□□□□□ -0.13
USP4-206ENST00000461553 TMEM121BQ9BXQ6 578 aaPredicted RBP14.27□□□□□ -0.13
USP4-206ENST00000461553 EBF2Q9HAK2 575 aa14.27□□□□□ -0.13
USP4-206ENST00000461553 PREBQ9HCU5 417 aa14.27□□□□□ -0.13
USP4-206ENST00000461553 GDF3Q9NR23 364 aa14.27□□□□□ -0.13
USP4-206ENST00000461553 PPM1HQ9ULR3 514 aa14.27□□□□□ -0.13
USP4-206ENST00000461553 MSRB2Q9Y3D2 182 aa14.27□□□□□ -0.13
USP4-206ENST00000461553 CFAP47Q6ZTR5 3102 aa14.26□□□□□ -0.13
USP4-206ENST00000461553 ACACAQ13085 2346 aa14.26□□□□□ -0.13
USP4-206ENST00000461553 ANKRD11Q6UB99 2663 aaPredicted RBP14.26□□□□□ -0.13
USP4-206ENST00000461553 ANKRD36A6QL64 1941 aa14.26□□□□□ -0.13
USP4-206ENST00000461553 A0A1B0GTQ1 180 aa14.26□□□□□ -0.13
USP4-206ENST00000461553 ANKRD62A6NC57 917 aa14.26□□□□□ -0.13
USP4-206ENST00000461553 C10orf142B7Z368 130 aa14.26□□□□□ -0.13
USP4-206ENST00000461553 K7ERQ8 282 aa14.26□□□□□ -0.13
USP4-206ENST00000461553 YKT6O15498 198 aa14.26□□□□□ -0.13
USP4-206ENST00000461553 ENDOD1O94919 500 aa14.26□□□□□ -0.13
USP4-206ENST00000461553 GJB6O95452 261 aa14.26□□□□□ -0.13
USP4-206ENST00000461553 MT-CO1P00395 513 aa14.26□□□□□ -0.13
USP4-206ENST00000461553 CTSLP07711 333 aa14.26□□□□□ -0.13
USP4-206ENST00000461553 DESP17661 470 aa14.26□□□□□ -0.13
USP4-206ENST00000461553 GPD1P21695 349 aa14.26□□□□□ -0.13
USP4-206ENST00000461553 GLDCP23378 1020 aa14.26□□□□□ -0.13
USP4-206ENST00000461553 MAT2AP31153 395 aaKnown RBP14.26□□□□□ -0.13
USP4-206ENST00000461553 CHRNA3P32297 505 aa14.26□□□□□ -0.13
USP4-206ENST00000461553 MAPKAPK2P49137 400 aa14.26□□□□□ -0.13
USP4-206ENST00000461553 SERPINH1P50454 418 aaKnown RBP14.26□□□□□ -0.13
USP4-206ENST00000461553 NRG1Q02297 640 aaPredicted RBP14.26□□□□□ -0.13
USP4-206ENST00000461553 GNA12Q03113 381 aa14.26□□□□□ -0.13
USP4-206ENST00000461553 NCAPHQ15003 741 aa14.26□□□□□ -0.13
USP4-206ENST00000461553 ANO6Q4KMQ2 910 aa14.26□□□□□ -0.13
USP4-206ENST00000461553 KCNT1Q5JUK3 1230 aa14.26□□□□□ -0.13
USP4-206ENST00000461553 DNAJC24Q6P3W2 148 aa14.26□□□□□ -0.13
USP4-206ENST00000461553 DBX2Q6ZNG2 339 aa14.26□□□□□ -0.13
USP4-206ENST00000461553 OR2A12Q8NGT7 310 aa14.26□□□□□ -0.13
USP4-206ENST00000461553 ZCCHC14Q8WYQ9 949 aaKnown RBP14.26□□□□□ -0.13
USP4-206ENST00000461553 TBC1D31Q96DN5 1066 aa14.26□□□□□ -0.13
USP4-206ENST00000461553 PCDHB18PQ96TA0 734 aa14.26□□□□□ -0.13
USP4-206ENST00000461553 ELF4Q99607 663 aaPredicted RBP14.26□□□□□ -0.13
USP4-206ENST00000461553 CEP44Q9C0F1 390 aa14.26□□□□□ -0.13
USP4-206ENST00000461553 ZNF212Q9UDV6 495 aa14.26□□□□□ -0.13
USP4-206ENST00000461553 OR12D3Q9UGF7 316 aa14.26□□□□□ -0.13
USP4-206ENST00000461553 IL36AQ9UHA7 158 aa14.26□□□□□ -0.13
USP4-206ENST00000461553 DMTF1Q9Y222 760 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms