RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 FRS2Q8WU20 508 aa15.75■□□□□ 0.11
VARS-219ENST00000461328 OR8D1Q8WZ84 308 aa15.75■□□□□ 0.11
VARS-219ENST00000461328 CCDC114Q96M63 670 aa15.75■□□□□ 0.11
VARS-219ENST00000461328 FAM129BQ96TA1 746 aa15.75■□□□□ 0.11
VARS-219ENST00000461328 PSMB7Q99436 277 aa15.75■□□□□ 0.11
VARS-219ENST00000461328 NEUROG2Q9H2A3 272 aa15.75■□□□□ 0.11
VARS-219ENST00000461328 MRPL47Q9HD33 250 aaKnown RBP15.75■□□□□ 0.11
VARS-219ENST00000461328 DNAAF2Q9NVR5 837 aaKnown RBP15.75■□□□□ 0.11
VARS-219ENST00000461328 FZD4Q9ULV1 537 aa15.75■□□□□ 0.11
VARS-219ENST00000461328 CNOT1A5YKK6 2376 aaKnown RBP15.75■□□□□ 0.11
VARS-219ENST00000461328 LRRC72A6NJI9 287 aa15.74■□□□□ 0.11
VARS-219ENST00000461328 FAM72CH0Y354 149 aa15.74■□□□□ 0.11
VARS-219ENST00000461328 RNF8O76064 485 aa15.74■□□□□ 0.11
VARS-219ENST00000461328 CD27P26842 260 aa15.74■□□□□ 0.11
VARS-219ENST00000461328 EPHB2P29323 1055 aa15.74■□□□□ 0.11
VARS-219ENST00000461328 ETFBP38117 255 aa15.74■□□□□ 0.11
VARS-219ENST00000461328 MAPKAPK2P49137 400 aa15.74■□□□□ 0.11
VARS-219ENST00000461328 AFF3P51826 1226 aaKnown RBP15.74■□□□□ 0.11
VARS-219ENST00000461328 GALCP54803 685 aa15.74■□□□□ 0.11
VARS-219ENST00000461328 AIF1P55008 147 aa15.74■□□□□ 0.11
VARS-219ENST00000461328 GNA12Q03113 381 aa15.74■□□□□ 0.11
VARS-219ENST00000461328 TEAD4Q15561 434 aa15.74■□□□□ 0.11
VARS-219ENST00000461328 DLG2Q15700 870 aa15.74■□□□□ 0.11
VARS-219ENST00000461328 TSR1Q2NL82 804 aaKnown RBP15.74■□□□□ 0.11
VARS-219ENST00000461328 FAM72AQ5TYM5 149 aa15.74■□□□□ 0.11
VARS-219ENST00000461328 MANEALQ5VSG8 457 aa15.74■□□□□ 0.11
VARS-219ENST00000461328 FAM72DQ6L9T8 149 aa15.74■□□□□ 0.11
VARS-219ENST00000461328 RETSATQ6NUM9 610 aa15.74■□□□□ 0.11
VARS-219ENST00000461328 FAM72BQ86X60 149 aa15.74■□□□□ 0.11
VARS-219ENST00000461328 PYROXD2Q8N2H3 581 aa15.74■□□□□ 0.11
VARS-219ENST00000461328 SH2D3CQ8N5H7 860 aa15.74■□□□□ 0.11
VARS-219ENST00000461328 AADATQ8N5Z0 425 aa15.74■□□□□ 0.11
VARS-219ENST00000461328 C1orf216Q8TAB5 229 aa15.74■□□□□ 0.11
VARS-219ENST00000461328 MAGEB5Q9BZ81 275 aa15.74■□□□□ 0.11
VARS-219ENST00000461328 DNAI1Q9UI46 699 aa15.74■□□□□ 0.11
VARS-219ENST00000461328 FZD10Q9ULW2 581 aa15.74■□□□□ 0.11
VARS-219ENST00000461328 FARP1Q9Y4F1 1045 aaPredicted RBP15.74■□□□□ 0.11
VARS-219ENST00000461328 A0A1B0GVT2 93 aa15.73■□□□□ 0.11
VARS-219ENST00000461328 UPK3BL1B0FP48 263 aa15.73■□□□□ 0.11
VARS-219ENST00000461328 UPK3BL2E5RIL1 263 aa15.73■□□□□ 0.11
VARS-219ENST00000461328 C1QTNF3-AMACRE9PGA6 284 aa15.73■□□□□ 0.11
VARS-219ENST00000461328 RAMP2O60895 175 aa15.73■□□□□ 0.11
VARS-219ENST00000461328 CER1O95813 267 aa15.73■□□□□ 0.11
VARS-219ENST00000461328 SRCP12931 536 aa15.73■□□□□ 0.11
VARS-219ENST00000461328 GOT1P17174 413 aa15.73■□□□□ 0.11
VARS-219ENST00000461328 GLDCP23378 1020 aa15.73■□□□□ 0.11
VARS-219ENST00000461328 PMLP29590 882 aa15.73■□□□□ 0.11
VARS-219ENST00000461328 L1CAMP32004 1257 aa15.73■□□□□ 0.11
VARS-219ENST00000461328 RECQLP46063 649 aaPredicted RBP15.73■□□□□ 0.11
VARS-219ENST00000461328 CSNK1EP49674 416 aaKnown RBP15.73■□□□□ 0.11
VARS-219ENST00000461328 TPI1P60174 286 aa15.73■□□□□ 0.11
VARS-219ENST00000461328 SLC14A1Q13336 389 aa15.73■□□□□ 0.11
VARS-219ENST00000461328 NCEH1Q6PIU2 408 aa15.73■□□□□ 0.11
VARS-219ENST00000461328 IL27RAQ6UWB1 636 aa15.73■□□□□ 0.11
VARS-219ENST00000461328 OR2T34Q8NGX1 318 aa15.73■□□□□ 0.11
VARS-219ENST00000461328 OR14C36Q8NHC7 312 aa15.73■□□□□ 0.11
VARS-219ENST00000461328 TRIM7Q9C029 511 aa15.73■□□□□ 0.11
VARS-219ENST00000461328 ISCUQ9H1K1 167 aa15.73■□□□□ 0.11
VARS-219ENST00000461328 DEF6Q9H4E7 631 aa15.73■□□□□ 0.11
VARS-219ENST00000461328 TM9SF3Q9HD45 589 aa15.73■□□□□ 0.11
VARS-219ENST00000461328 TMEM248Q9NWD8 314 aa15.73■□□□□ 0.11
VARS-219ENST00000461328 ZNHIT6Q9NWK9 470 aaKnown RBP15.73■□□□□ 0.11
VARS-219ENST00000461328 GPATCH2LQ9NWQ4 482 aa15.73■□□□□ 0.11
VARS-219ENST00000461328 ZNF212Q9UDV6 495 aa15.73■□□□□ 0.11
VARS-219ENST00000461328 PCSK1NQ9UHG2 260 aa15.73■□□□□ 0.11
VARS-219ENST00000461328 ANGPTL2Q9UKU9 493 aa15.73■□□□□ 0.11
VARS-219ENST00000461328 HPCAL4Q9UM19 191 aa15.73■□□□□ 0.11
VARS-219ENST00000461328 AP4E1Q9UPM8 1137 aa15.73■□□□□ 0.11
VARS-219ENST00000461328 HS3ST2Q9Y278 367 aa15.73■□□□□ 0.11
VARS-219ENST00000461328 SLCO1B1Q9Y6L6 691 aa15.73■□□□□ 0.11
VARS-219ENST00000461328 NUMA1Q14980 2115 aa15.73■□□□□ 0.11
VARS-219ENST00000461328 NYNRINQ9P2P1 1898 aaKnown RBP15.72■□□□□ 0.11
VARS-219ENST00000461328 A0A087X0T9 212 aa15.72■□□□□ 0.11
VARS-219ENST00000461328 TMEM191CA6NGB0 347 aa15.72■□□□□ 0.11
VARS-219ENST00000461328 K7ERQ8 282 aa15.72■□□□□ 0.11
VARS-219ENST00000461328 ALOX15BO15296 676 aa15.72■□□□□ 0.11
VARS-219ENST00000461328 PRPSAP2O60256 369 aa15.72■□□□□ 0.11
VARS-219ENST00000461328 MT-CO1P00395 513 aa15.72■□□□□ 0.11
VARS-219ENST00000461328 IGHV4-34P06331 123 aa15.72■□□□□ 0.11
VARS-219ENST00000461328 FAM228BP0C875 321 aa15.72■□□□□ 0.11
VARS-219ENST00000461328 CD59P13987 128 aa15.72■□□□□ 0.11
VARS-219ENST00000461328 CLCN6P51797 869 aa15.72■□□□□ 0.11
VARS-219ENST00000461328 POM121L1PQ3SYA9 428 aa15.72■□□□□ 0.11
VARS-219ENST00000461328 CCDC122Q5T0U0 273 aa15.72■□□□□ 0.11
VARS-219ENST00000461328 FAM46CQ5VWP2 391 aa15.72■□□□□ 0.11
VARS-219ENST00000461328 C22orf39Q6P5X5 142 aa15.72■□□□□ 0.11
VARS-219ENST00000461328 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.72■□□□□ 0.11
VARS-219ENST00000461328 ADAT2Q7Z6V5 191 aaKnown RBP15.72■□□□□ 0.11
VARS-219ENST00000461328 PIP4P1Q86T03 277 aa15.72■□□□□ 0.11
VARS-219ENST00000461328 NLRP14Q86W24 1093 aa15.72■□□□□ 0.11
VARS-219ENST00000461328 VSTM4Q8IW00 320 aa15.72■□□□□ 0.11
VARS-219ENST00000461328 FNIP1Q8TF40 1166 aa15.72■□□□□ 0.11
VARS-219ENST00000461328 THAP2Q9H0W7 228 aa15.72■□□□□ 0.11
VARS-219ENST00000461328 DHX35Q9H5Z1 703 aaKnown RBP15.72■□□□□ 0.11
VARS-219ENST00000461328 RETREG1Q9H6L5 497 aa15.72■□□□□ 0.11
VARS-219ENST00000461328 GAREM1Q9H706 876 aa15.72■□□□□ 0.11
VARS-219ENST00000461328 CATSPERBQ9H7T0 1116 aa15.72■□□□□ 0.11
VARS-219ENST00000461328 OSGEPQ9NPF4 335 aa15.72■□□□□ 0.11
VARS-219ENST00000461328 ARHGAP20Q9P2F6 1191 aa15.72■□□□□ 0.11
VARS-219ENST00000461328 NEU3Q9UQ49 428 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms