RNA–Protein interactions for RNA: ENST00000461111.1

AGRN-203, Transcript of agrin, humanhuman

TSL 1 (best)

Gene AGRN, Length 3,385 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGRN-203ENST00000461111 PRKCBP05771 671 aa12.69□□□□□ -0.38
AGRN-203ENST00000461111 PABPC1P11940 636 aaKnown RBP12.69□□□□□ -0.38
AGRN-203ENST00000461111 HSD17B4P51659 736 aa12.69□□□□□ -0.38
AGRN-203ENST00000461111 SF3B4Q15427 424 aaKnown RBP eCLIP12.69□□□□□ -0.381e-7■■■■□ 20.1
AGRN-203ENST00000461111 KCNJ8Q15842 424 aa12.69□□□□□ -0.38
AGRN-203ENST00000461111 KRT27Q7Z3Y8 459 aa12.69□□□□□ -0.38
AGRN-203ENST00000461111 RP9Q8TA86 221 aaKnown RBP12.69□□□□□ -0.38
AGRN-203ENST00000461111 CNDP1Q96KN2 507 aa12.69□□□□□ -0.38
AGRN-203ENST00000461111 PEBP4Q96S96 227 aa12.69□□□□□ -0.38
AGRN-203ENST00000461111 EHD1Q9H4M9 534 aa12.69□□□□□ -0.38
AGRN-203ENST00000461111 PNPLA8Q9NP80 782 aa12.69□□□□□ -0.38
AGRN-203ENST00000461111 UBP1Q9NZI7 540 aa12.69□□□□□ -0.38
AGRN-203ENST00000461111 CYTH4Q9UIA0 394 aa12.69□□□□□ -0.38
AGRN-203ENST00000461111 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.69□□□□□ -0.38
AGRN-203ENST00000461111 CLOCKO15516 846 aa12.69□□□□□ -0.38
AGRN-203ENST00000461111 B4GAT1O43505 415 aa12.69□□□□□ -0.38
AGRN-203ENST00000461111 ITGBL1O95965 494 aaPredicted RBP12.69□□□□□ -0.38
AGRN-203ENST00000461111 EDN1P05305 212 aa12.69□□□□□ -0.38
AGRN-203ENST00000461111 LCP1P13796 627 aa12.69□□□□□ -0.38
AGRN-203ENST00000461111 AVPR1AP37288 418 aa12.69□□□□□ -0.38
AGRN-203ENST00000461111 TXNL4AP83876 142 aaKnown RBP12.69□□□□□ -0.38
AGRN-203ENST00000461111 GBE1Q04446 702 aa12.69□□□□□ -0.38
AGRN-203ENST00000461111 FAM219BQ5XKK7 198 aa12.69□□□□□ -0.38
AGRN-203ENST00000461111 B3GNT9Q6UX72 402 aa12.69□□□□□ -0.38
AGRN-203ENST00000461111 ZBTB8OSQ8IWT0 167 aa12.69□□□□□ -0.38
AGRN-203ENST00000461111 ALDH16A1Q8IZ83 802 aa12.69□□□□□ -0.38
AGRN-203ENST00000461111 PGAM4Q8N0Y7 254 aa12.69□□□□□ -0.38
AGRN-203ENST00000461111 PLD5Q8N7P1 536 aa12.69□□□□□ -0.38
AGRN-203ENST00000461111 SREK1Q8WXA9 508 aaKnown RBP12.69□□□□□ -0.38
AGRN-203ENST00000461111 STARD8Q92502 1023 aa12.69□□□□□ -0.38
AGRN-203ENST00000461111 RPL10LQ96L21 214 aaKnown RBP12.69□□□□□ -0.38
AGRN-203ENST00000461111 TWNKQ96RR1 684 aa12.69□□□□□ -0.38
AGRN-203ENST00000461111 LPIN3Q9BQK8 851 aa12.69□□□□□ -0.38
AGRN-203ENST00000461111 CCDC68Q9H2F9 335 aa12.69□□□□□ -0.38
AGRN-203ENST00000461111 POLE4Q9NR33 117 aa12.69□□□□□ -0.38
AGRN-203ENST00000461111 SLC27A5Q9Y2P5 690 aa12.69□□□□□ -0.38
AGRN-203ENST00000461111 TRUB2O95900 331 aaKnown RBP12.68□□□□□ -0.38
AGRN-203ENST00000461111 CLCN3P51790 818 aa12.68□□□□□ -0.38
AGRN-203ENST00000461111 RAD23AP54725 363 aa12.68□□□□□ -0.38
AGRN-203ENST00000461111 PRKCQQ04759 706 aa12.68□□□□□ -0.38
AGRN-203ENST00000461111 STILQ15468 1287 aa12.68□□□□□ -0.38
AGRN-203ENST00000461111 ANKRD26P1Q6NSI1 321 aa12.68□□□□□ -0.38
AGRN-203ENST00000461111 PARP8Q8N3A8 854 aa12.68□□□□□ -0.38
AGRN-203ENST00000461111 CANT1Q8WVQ1 401 aa12.68□□□□□ -0.38
AGRN-203ENST00000461111 DLG3Q92796 817 aa12.68□□□□□ -0.38
AGRN-203ENST00000461111 ZNF597Q96LX8 424 aa12.68□□□□□ -0.38
AGRN-203ENST00000461111 FBXL18Q96ME1 805 aa12.68□□□□□ -0.38
AGRN-203ENST00000461111 TPK1Q9H3S4 243 aa12.68□□□□□ -0.38
AGRN-203ENST00000461111 RPF1Q9H9Y2 349 aaKnown RBP12.68□□□□□ -0.38
AGRN-203ENST00000461111 SMOXQ9NWM0 555 aa12.68□□□□□ -0.38
AGRN-203ENST00000461111 EGFL7Q9UHF1 273 aa12.68□□□□□ -0.38
AGRN-203ENST00000461111 PCDHA11Q9Y5I1 949 aa12.68□□□□□ -0.38
AGRN-203ENST00000461111 COL22A1Q8NFW1 1626 aaPredicted RBP12.68□□□□□ -0.38
AGRN-203ENST00000461111 TAF1LQ8IZX4 1826 aa12.68□□□□□ -0.38
AGRN-203ENST00000461111 H0YCG3 227 aa12.68□□□□□ -0.38
AGRN-203ENST00000461111 ADORA2BP29275 332 aa12.68□□□□□ -0.38
AGRN-203ENST00000461111 SDC4P31431 198 aa12.68□□□□□ -0.38
AGRN-203ENST00000461111 GRM5P41594 1212 aa12.68□□□□□ -0.38
AGRN-203ENST00000461111 TPTEP56180 551 aa12.68□□□□□ -0.38
AGRN-203ENST00000461111 DGKDQ16760 1214 aa12.68□□□□□ -0.38
AGRN-203ENST00000461111 CA9Q16790 459 aa12.68□□□□□ -0.38
AGRN-203ENST00000461111 USP41Q3LFD5 358 aa12.68□□□□□ -0.38
AGRN-203ENST00000461111 ARL13AQ5H913 290 aaPredicted RBP12.68□□□□□ -0.38
AGRN-203ENST00000461111 HEATR6Q6AI08 1181 aaKnown RBP12.68□□□□□ -0.38
AGRN-203ENST00000461111 PIWIL3Q7Z3Z3 882 aaKnown RBP12.68□□□□□ -0.38
AGRN-203ENST00000461111 IGFN1Q86VF2 1251 aa12.68□□□□□ -0.38
AGRN-203ENST00000461111 IFNEQ86WN2 208 aa12.68□□□□□ -0.38
AGRN-203ENST00000461111 RNF135Q8IUD6 432 aa12.68□□□□□ -0.38
AGRN-203ENST00000461111 PQLC3Q8N755 202 aa12.68□□□□□ -0.38
AGRN-203ENST00000461111 PDZD8Q8NEN9 1154 aa12.68□□□□□ -0.38
AGRN-203ENST00000461111 GJD4Q96KN9 370 aaPredicted RBP12.68□□□□□ -0.38
AGRN-203ENST00000461111 DHRS1Q96LJ7 313 aa12.68□□□□□ -0.38
AGRN-203ENST00000461111 CCDC138Q96M89 665 aa12.68□□□□□ -0.38
AGRN-203ENST00000461111 EFHD1Q9BUP0 239 aa12.68□□□□□ -0.38
AGRN-203ENST00000461111 NPLQ9BXD5 320 aaPredicted RBP12.68□□□□□ -0.38
AGRN-203ENST00000461111 SNX15Q9NRS6 342 aa12.68□□□□□ -0.38
AGRN-203ENST00000461111 ATP11BQ9Y2G3 1177 aa12.68□□□□□ -0.38
AGRN-203ENST00000461111 GIT1Q9Y2X7 761 aa12.68□□□□□ -0.38
AGRN-203ENST00000461111 PCDHB12Q9Y5F1 795 aa12.68□□□□□ -0.38
AGRN-203ENST00000461111 KCNK1O00180 336 aa12.67□□□□□ -0.38
AGRN-203ENST00000461111 PSMD11O00231 422 aa12.67□□□□□ -0.38
AGRN-203ENST00000461111 TRIM38O00635 465 aa12.67□□□□□ -0.38
AGRN-203ENST00000461111 MED7O43513 233 aa12.67□□□□□ -0.38
AGRN-203ENST00000461111 TRIM13O60858 407 aa12.67□□□□□ -0.38
AGRN-203ENST00000461111 ASS1P00966 412 aaKnown RBP12.67□□□□□ -0.38
AGRN-203ENST00000461111 NCAM1P13591 858 aa12.67□□□□□ -0.38
AGRN-203ENST00000461111 TFEBP19484 476 aa12.67□□□□□ -0.38
AGRN-203ENST00000461111 STAT5BP51692 787 aa12.67□□□□□ -0.38
AGRN-203ENST00000461111 SNRPFP62306 86 aaKnown RBP12.67□□□□□ -0.38
AGRN-203ENST00000461111 ZIK1Q3SY52 487 aaPredicted RBP12.67□□□□□ -0.38
AGRN-203ENST00000461111 AGKQ53H12 422 aa12.67□□□□□ -0.38
AGRN-203ENST00000461111 EEF1DP3Q658K8 133 aa12.67□□□□□ -0.38
AGRN-203ENST00000461111 DHRS4L2Q6PKH6 230 aa12.67□□□□□ -0.38
AGRN-203ENST00000461111 SAMD7Q7Z3H4 446 aa12.67□□□□□ -0.38
AGRN-203ENST00000461111 NSMCE3Q96MG7 304 aa12.67□□□□□ -0.38
AGRN-203ENST00000461111 TASP1Q9H6P5 420 aa12.67□□□□□ -0.38
AGRN-203ENST00000461111 EPS8L2Q9H6S3 715 aa12.67□□□□□ -0.38
AGRN-203ENST00000461111 GTSE1Q9NYZ3 720 aa12.67□□□□□ -0.38
AGRN-203ENST00000461111 ARHGAP28Q9P2N2 729 aa12.67□□□□□ -0.38
AGRN-203ENST00000461111 CDYLQ9Y232 598 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms