RNA–Protein interactions for RNA: ENST00000460826.1

HDLBP-229, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 442 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-229ENST00000460826 POLMQ9NP87 494 aaPredicted RBP14.3□□□□□ -0.12
HDLBP-229ENST00000460826 AMFRQ9UKV5 643 aa14.3□□□□□ -0.12
HDLBP-229ENST00000460826 PYCARDQ9ULZ3 195 aa14.3□□□□□ -0.12
HDLBP-229ENST00000460826 HS3ST2Q9Y278 367 aa14.3□□□□□ -0.12
HDLBP-229ENST00000460826 PCDHA3Q9Y5H8 950 aa14.3□□□□□ -0.12
HDLBP-229ENST00000460826 ANKRD36A6QL64 1941 aa14.29□□□□□ -0.12
HDLBP-229ENST00000460826 ARHGAP42A6NI28 874 aa14.29□□□□□ -0.12
HDLBP-229ENST00000460826 J3KR12 359 aa14.29□□□□□ -0.12
HDLBP-229ENST00000460826 DFFAO00273 331 aa14.29□□□□□ -0.12
HDLBP-229ENST00000460826 DDX3YO15523 660 aaKnown RBP14.29□□□□□ -0.12
HDLBP-229ENST00000460826 ZNF821O75541 412 aaPredicted RBP14.29□□□□□ -0.12
HDLBP-229ENST00000460826 MAP3K6O95382 1288 aa14.29□□□□□ -0.12
HDLBP-229ENST00000460826 APBB3O95704 486 aa14.29□□□□□ -0.12
HDLBP-229ENST00000460826 GABRG2P18507 467 aa14.29□□□□□ -0.12
HDLBP-229ENST00000460826 NDUFV2P19404 249 aa14.29□□□□□ -0.12
HDLBP-229ENST00000460826 CDKN2BP42772 138 aa14.29□□□□□ -0.12
HDLBP-229ENST00000460826 SERPINH1P50454 418 aaKnown RBP14.29□□□□□ -0.12
HDLBP-229ENST00000460826 COPAP53621 1224 aa14.29□□□□□ -0.12
HDLBP-229ENST00000460826 STARD3Q14849 445 aa14.29□□□□□ -0.12
HDLBP-229ENST00000460826 PAFAH1B3Q15102 231 aaKnown RBP14.29□□□□□ -0.12
HDLBP-229ENST00000460826 TAZQ16635 292 aa14.29□□□□□ -0.12
HDLBP-229ENST00000460826 C9orf64Q5T6V5 341 aa14.29□□□□□ -0.12
HDLBP-229ENST00000460826 RETSATQ6NUM9 610 aa14.29□□□□□ -0.12
HDLBP-229ENST00000460826 SPOCD1Q6ZMY3 1216 aa14.29□□□□□ -0.12
HDLBP-229ENST00000460826 PEX26Q7Z412 305 aa14.29□□□□□ -0.12
HDLBP-229ENST00000460826 RASSF3Q86WH2 238 aa14.29□□□□□ -0.12
HDLBP-229ENST00000460826 VSIG1Q86XK7 387 aa14.29□□□□□ -0.12
HDLBP-229ENST00000460826 SYCE1Q8N0S2 351 aa14.29□□□□□ -0.12
HDLBP-229ENST00000460826 CAMKK1Q8N5S9 505 aa14.29□□□□□ -0.12
HDLBP-229ENST00000460826 LZTR1Q8N653 840 aa14.29□□□□□ -0.12
HDLBP-229ENST00000460826 PLD5Q8N7P1 536 aa14.29□□□□□ -0.12
HDLBP-229ENST00000460826 ATP11CQ8NB49 1132 aa14.29□□□□□ -0.12
HDLBP-229ENST00000460826 TPSD1Q9BZJ3 242 aa14.29□□□□□ -0.12
HDLBP-229ENST00000460826 MKRN2Q9H000 416 aaKnown RBP14.29□□□□□ -0.12
HDLBP-229ENST00000460826 PDFQ9HBH1 243 aa14.29□□□□□ -0.12
HDLBP-229ENST00000460826 DONSONQ9NYP3 566 aa14.29□□□□□ -0.12
HDLBP-229ENST00000460826 SUN2Q9UH99 717 aa14.29□□□□□ -0.12
HDLBP-229ENST00000460826 FCF1Q9Y324 198 aaKnown RBP14.29□□□□□ -0.12
HDLBP-229ENST00000460826 CEP192Q8TEP8 1941 aa14.29□□□□□ -0.12
HDLBP-229ENST00000460826 VPS13AQ96RL7 3174 aa14.28□□□□□ -0.12
HDLBP-229ENST00000460826 EDDM13A0A1B0GTR0 161 aa14.28□□□□□ -0.12
HDLBP-229ENST00000460826 CCDC66A2RUB6 948 aa14.28□□□□□ -0.12
HDLBP-229ENST00000460826 ZNF487B1APH4 448 aa14.28□□□□□ -0.12
HDLBP-229ENST00000460826 SYNCRIPO60506 623 aaKnown RBP14.28□□□□□ -0.12
HDLBP-229ENST00000460826 PRAMEF11O60813 436 aa14.28□□□□□ -0.12
HDLBP-229ENST00000460826 DMDP11532 3685 aa14.28□□□□□ -0.12
HDLBP-229ENST00000460826 KRT10P13645 584 aa14.28□□□□□ -0.12
HDLBP-229ENST00000460826 HOXA6P31267 233 aa14.28□□□□□ -0.12
HDLBP-229ENST00000460826 NNMTP40261 264 aa14.28□□□□□ -0.12
HDLBP-229ENST00000460826 GBE1Q04446 702 aa14.28□□□□□ -0.12
HDLBP-229ENST00000460826 ADCY2Q08462 1091 aa14.28□□□□□ -0.12
HDLBP-229ENST00000460826 SLC10A2Q12908 348 aaPredicted RBP14.28□□□□□ -0.12
HDLBP-229ENST00000460826 ZNF528Q3MIS6 628 aa14.28□□□□□ -0.12
HDLBP-229ENST00000460826 GON4LQ3T8J9 2241 aa14.28□□□□□ -0.12
HDLBP-229ENST00000460826 ACCSLQ4AC99 568 aa14.28□□□□□ -0.12
HDLBP-229ENST00000460826 SLC9A4Q6AI14 798 aa14.28□□□□□ -0.12
HDLBP-229ENST00000460826 AADACL2Q6P093 401 aa14.28□□□□□ -0.12
HDLBP-229ENST00000460826 C22orf39Q6P5X5 142 aa14.28□□□□□ -0.12
HDLBP-229ENST00000460826 Q6ZVU0 165 aa14.28□□□□□ -0.12
HDLBP-229ENST00000460826 CACUL1Q86Y37 369 aa14.28□□□□□ -0.12
HDLBP-229ENST00000460826 RFX6Q8HWS3 928 aa14.28□□□□□ -0.12
HDLBP-229ENST00000460826 OR2T3Q8NH03 318 aa14.28□□□□□ -0.12
HDLBP-229ENST00000460826 EXD1Q8NHP7 514 aa14.28□□□□□ -0.12
HDLBP-229ENST00000460826 PRRX2Q99811 253 aa14.28□□□□□ -0.12
HDLBP-229ENST00000460826 HERPUD2Q9BSE4 406 aa14.28□□□□□ -0.12
HDLBP-229ENST00000460826 TNKS2Q9H2K2 1166 aa14.28□□□□□ -0.12
HDLBP-229ENST00000460826 HPCAL4Q9UM19 191 aa14.28□□□□□ -0.12
HDLBP-229ENST00000460826 THADAQ6YHU6 1953 aa14.27□□□□□ -0.12
HDLBP-229ENST00000460826 hCG_1818297A0A087WSY0 165 aa14.27□□□□□ -0.13
HDLBP-229ENST00000460826 TARSL2A2RTX5 802 aaKnown RBP14.27□□□□□ -0.13
HDLBP-229ENST00000460826 AXIN1O15169 862 aa14.27□□□□□ -0.13
HDLBP-229ENST00000460826 BNIP3LO60238 219 aa14.27□□□□□ -0.13
HDLBP-229ENST00000460826 ZRANB2O95218 330 aaKnown RBP eCLIP14.27□□□□□ -0.13
HDLBP-229ENST00000460826 SERPINB6P35237 376 aa14.27□□□□□ -0.13
HDLBP-229ENST00000460826 DNA2P51530 1060 aa14.27□□□□□ -0.13
HDLBP-229ENST00000460826 DYNLT1P63172 113 aa14.27□□□□□ -0.13
HDLBP-229ENST00000460826 SLC20A2Q08357 652 aa14.27□□□□□ -0.13
HDLBP-229ENST00000460826 ODF2Q5BJF6 829 aa14.27□□□□□ -0.13
HDLBP-229ENST00000460826 KAZNQ674X7 775 aa14.27□□□□□ -0.13
HDLBP-229ENST00000460826 NPNTQ6UXI9 565 aa14.27□□□□□ -0.13
HDLBP-229ENST00000460826 WDR5BQ86VZ2 330 aa14.27□□□□□ -0.13
HDLBP-229ENST00000460826 CCDC50Q8IVM0 306 aa14.27□□□□□ -0.13
HDLBP-229ENST00000460826 RCOR2Q8IZ40 523 aa14.27□□□□□ -0.13
HDLBP-229ENST00000460826 STK40Q8N2I9 435 aa14.27□□□□□ -0.13
HDLBP-229ENST00000460826 LRRN4Q8WUT4 740 aa14.27□□□□□ -0.13
HDLBP-229ENST00000460826 HES6Q96HZ4 224 aa14.27□□□□□ -0.13
HDLBP-229ENST00000460826 RBM41Q96IZ5 413 aaKnown RBP14.27□□□□□ -0.13
HDLBP-229ENST00000460826 MRGPRX1Q96LB2 322 aa14.27□□□□□ -0.13
HDLBP-229ENST00000460826 FAM129BQ96TA1 746 aa14.27□□□□□ -0.13
HDLBP-229ENST00000460826 CD93Q9NPY3 652 aa14.27□□□□□ -0.13
HDLBP-229ENST00000460826 TRMT1Q9NXH9 659 aaKnown RBP14.27□□□□□ -0.13
HDLBP-229ENST00000460826 BCCIPQ9P287 314 aaKnown RBP eCLIP14.27□□□□□ -0.13
HDLBP-229ENST00000460826 EBF1Q9UH73 591 aa14.27□□□□□ -0.13
HDLBP-229ENST00000460826 IPO11Q9UI26 975 aaKnown RBP14.27□□□□□ -0.13
HDLBP-229ENST00000460826 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.27□□□□□ -0.13
HDLBP-229ENST00000460826 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.27□□□□□ -0.13
HDLBP-229ENST00000460826 WDR87Q6ZQQ6 2873 aa14.27□□□□□ -0.13
HDLBP-229ENST00000460826 GPR179Q6PRD1 2367 aa14.26□□□□□ -0.13
HDLBP-229ENST00000460826 CXorf51AA0A1B0GTR3 108 aa14.26□□□□□ -0.13
HDLBP-229ENST00000460826 ZSCAN5CA6NGD5 496 aaPredicted RBP14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms