RNA–Protein interactions for RNA: ENST00000460770.1

SYPL1-203, Transcript of synaptophysin like 1, humanhuman

TSL 1 (best)

Gene SYPL1, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-203ENST00000460770 PRPF18Q99633 342 aaKnown RBP2.84□□□□□ -1.95
SYPL1-203ENST00000460770 SLC25A33Q9BSK2 321 aa2.84□□□□□ -1.95
SYPL1-203ENST00000460770 SORBS1Q9BX66 1292 aaKnown RBP2.84□□□□□ -1.95
SYPL1-203ENST00000460770 PCGF6Q9BYE7 350 aa2.84□□□□□ -1.95
SYPL1-203ENST00000460770 XRN2Q9H0D6 950 aaKnown RBP eCLIP2.84□□□□□ -1.95
SYPL1-203ENST00000460770 TP63Q9H3D4 680 aaPredicted RBP2.84□□□□□ -1.95
SYPL1-203ENST00000460770 SEL1LQ9UBV2 794 aa2.84□□□□□ -1.95
SYPL1-203ENST00000460770 AGO1Q9UL18 857 aaKnown RBP2.84□□□□□ -1.95
SYPL1-203ENST00000460770 TCRBV7S3A2A0A539 114 aa2.83□□□□□ -1.96
SYPL1-203ENST00000460770 SLC38A8A6NNN8 435 aa2.83□□□□□ -1.96
SYPL1-203ENST00000460770 KIF28PB7ZC32 967 aa2.83□□□□□ -1.96
SYPL1-203ENST00000460770 BMPR1BO00238 502 aa2.83□□□□□ -1.96
SYPL1-203ENST00000460770 LDB2O43679 373 aa2.83□□□□□ -1.96
SYPL1-203ENST00000460770 SP1P08047 785 aa2.83□□□□□ -1.96
SYPL1-203ENST00000460770 ZNF12P17014 697 aa2.83□□□□□ -1.96
SYPL1-203ENST00000460770 CXCR3P49682 368 aa2.83□□□□□ -1.96
SYPL1-203ENST00000460770 SNTA1Q13424 505 aa2.83□□□□□ -1.96
SYPL1-203ENST00000460770 HLTFQ14527 1009 aaKnown RBP eCLIP2.83□□□□□ -1.96
SYPL1-203ENST00000460770 HNF4GQ14541 408 aa2.83□□□□□ -1.96
SYPL1-203ENST00000460770 TMEM268Q5VZI3 342 aa2.83□□□□□ -1.96
SYPL1-203ENST00000460770 ATG9BQ674R7 924 aa2.83□□□□□ -1.96
SYPL1-203ENST00000460770 TMEM71Q6P5X7 295 aa2.83□□□□□ -1.96
SYPL1-203ENST00000460770 TMC8Q8IU68 726 aa2.83□□□□□ -1.96
SYPL1-203ENST00000460770 TMEM217Q8N7C4 229 aa2.83□□□□□ -1.96
SYPL1-203ENST00000460770 HDAC7Q8WUI4 952 aa2.83□□□□□ -1.96
SYPL1-203ENST00000460770 FAR1Q8WVX9 515 aa2.83□□□□□ -1.96
SYPL1-203ENST00000460770 HMGB4Q8WW32 186 aa2.83□□□□□ -1.96
SYPL1-203ENST00000460770 MUL1Q969V5 352 aa2.83□□□□□ -1.96
SYPL1-203ENST00000460770 MCRS1Q96EZ8 462 aa2.83□□□□□ -1.96
SYPL1-203ENST00000460770 NODALQ96S42 347 aa2.83□□□□□ -1.96
SYPL1-203ENST00000460770 SARGQ9BW04 601 aa2.83□□□□□ -1.96
SYPL1-203ENST00000460770 TRIM31Q9BZY9 425 aa2.83□□□□□ -1.96
SYPL1-203ENST00000460770 ABHD16BQ9H3Z7 469 aa2.83□□□□□ -1.96
SYPL1-203ENST00000460770 TMLHEQ9NVH6 421 aa2.83□□□□□ -1.96
SYPL1-203ENST00000460770 OCIAD1Q9NX40 245 aa2.83□□□□□ -1.96
SYPL1-203ENST00000460770 BAG5Q9UL15 447 aa2.83□□□□□ -1.96
SYPL1-203ENST00000460770 FAM50BQ9Y247 325 aa2.83□□□□□ -1.96
SYPL1-203ENST00000460770 PAM16Q9Y3D7 125 aa2.83□□□□□ -1.96
SYPL1-203ENST00000460770 TRIP12Q14669 1992 aaPredicted RBP2.82□□□□□ -1.96
SYPL1-203ENST00000460770 IGLV5-37A0A075B6J1 123 aa2.82□□□□□ -1.96
SYPL1-203ENST00000460770 MAGEA13PA6NCF6 341 aa2.82□□□□□ -1.96
SYPL1-203ENST00000460770 RASA4BC9J798 803 aa2.82□□□□□ -1.96
SYPL1-203ENST00000460770 RASA4O43374 803 aa2.82□□□□□ -1.96
SYPL1-203ENST00000460770 SERPINB2P05120 415 aa2.82□□□□□ -1.96
SYPL1-203ENST00000460770 SLC5A1P13866 664 aa2.82□□□□□ -1.96
SYPL1-203ENST00000460770 AMD1P17707 334 aa2.82□□□□□ -1.96
SYPL1-203ENST00000460770 GM2AP17900 193 aa2.82□□□□□ -1.96
SYPL1-203ENST00000460770 SKIV2L2P42285 1042 aaKnown RBP2.82□□□□□ -1.96
SYPL1-203ENST00000460770 HSPA7P48741 367 aa2.82□□□□□ -1.96
SYPL1-203ENST00000460770 CDK7P50613 346 aa2.82□□□□□ -1.96
SYPL1-203ENST00000460770 SF3B4Q15427 424 aaKnown RBP eCLIP2.82□□□□□ -1.96
SYPL1-203ENST00000460770 ZNF284Q2VY69 593 aa2.82□□□□□ -1.96
SYPL1-203ENST00000460770 ADAM5Q6NVV9 412 aa2.82□□□□□ -1.96
SYPL1-203ENST00000460770 SERPINA11Q86U17 422 aa2.82□□□□□ -1.96
SYPL1-203ENST00000460770 DCUN1D3Q8IWE4 304 aa2.82□□□□□ -1.96
SYPL1-203ENST00000460770 ANKRD13AQ8IZ07 590 aa2.82□□□□□ -1.96
SYPL1-203ENST00000460770 NAGSQ8N159 534 aa2.82□□□□□ -1.96
SYPL1-203ENST00000460770 OR2C3Q8N628 320 aa2.82□□□□□ -1.96
SYPL1-203ENST00000460770 LILRB1Q8NHL6 650 aaPredicted RBP2.82□□□□□ -1.96
SYPL1-203ENST00000460770 CLEC4CQ8WTT0 213 aa2.82□□□□□ -1.96
SYPL1-203ENST00000460770 TXNDC15Q96J42 360 aa2.82□□□□□ -1.96
SYPL1-203ENST00000460770 IL17FQ96PD4 163 aa2.82□□□□□ -1.96
SYPL1-203ENST00000460770 UHRF2Q96PU4 802 aa2.82□□□□□ -1.96
SYPL1-203ENST00000460770 TEFMQ96QE5 360 aaKnown RBP2.82□□□□□ -1.96
SYPL1-203ENST00000460770 PIGSQ96S52 555 aa2.82□□□□□ -1.96
SYPL1-203ENST00000460770 MMTAG2Q9BU76 263 aaKnown RBP2.82□□□□□ -1.96
SYPL1-203ENST00000460770 CADM1Q9BY67 442 aaKnown RBP2.82□□□□□ -1.96
SYPL1-203ENST00000460770 STK33Q9BYT3 514 aa2.82□□□□□ -1.96
SYPL1-203ENST00000460770 CERS4Q9HA82 394 aa2.82□□□□□ -1.96
SYPL1-203ENST00000460770 PDE11AQ9HCR9 933 aa2.82□□□□□ -1.96
SYPL1-203ENST00000460770 HERC5Q9UII4 1024 aaKnown RBP2.82□□□□□ -1.96
SYPL1-203ENST00000460770 CDH22Q9UJ99 828 aa2.82□□□□□ -1.96
SYPL1-203ENST00000460770 SLC39A10Q9ULF5 831 aa2.82□□□□□ -1.96
SYPL1-203ENST00000460770 SLC45A1Q9Y2W3 748 aa2.82□□□□□ -1.96
SYPL1-203ENST00000460770 RAI2Q9Y5P3 530 aa2.82□□□□□ -1.96
SYPL1-203ENST00000460770 NFS1Q9Y697 457 aa2.82□□□□□ -1.96
SYPL1-203ENST00000460770 SAA2-SAA4A0A096LPE2 208 aa2.81□□□□□ -1.96
SYPL1-203ENST00000460770 IGLV5-52A0A0A0MRZ9 124 aa2.81□□□□□ -1.96
SYPL1-203ENST00000460770 PRR23AA6NEV1 266 aa2.81□□□□□ -1.96
SYPL1-203ENST00000460770 KDM4EB2RXH2 506 aaPredicted RBP2.81□□□□□ -1.96
SYPL1-203ENST00000460770 HSPB6O14558 160 aa2.81□□□□□ -1.96
SYPL1-203ENST00000460770 CLGNO14967 610 aa2.81□□□□□ -1.96
SYPL1-203ENST00000460770 PIP5K1BO14986 540 aa2.81□□□□□ -1.96
SYPL1-203ENST00000460770 HNRNPRO43390 633 aaKnown RBP2.81□□□□□ -1.96
SYPL1-203ENST00000460770 RNF224P0DH78 156 aa2.81□□□□□ -1.96
SYPL1-203ENST00000460770 PRPH2P23942 346 aa2.81□□□□□ -1.96
SYPL1-203ENST00000460770 KLRK1P26718 216 aa2.81□□□□□ -1.96
SYPL1-203ENST00000460770 GPR12P47775 334 aa2.81□□□□□ -1.96
SYPL1-203ENST00000460770 ECT2LQ008S8 904 aa2.81□□□□□ -1.96
SYPL1-203ENST00000460770 ZBTB16Q05516 673 aa2.81□□□□□ -1.96
SYPL1-203ENST00000460770 ST3GAL1Q11201 340 aa2.81□□□□□ -1.96
SYPL1-203ENST00000460770 ACCSLQ4AC99 568 aa2.81□□□□□ -1.96
SYPL1-203ENST00000460770 GXYLT1Q4G148 440 aa2.81□□□□□ -1.96
SYPL1-203ENST00000460770 DCAF6Q58WW2 860 aa2.81□□□□□ -1.96
SYPL1-203ENST00000460770 TYW3Q6IPR3 259 aaKnown RBP2.81□□□□□ -1.96
SYPL1-203ENST00000460770 AADACL2Q6P093 401 aa2.81□□□□□ -1.96
SYPL1-203ENST00000460770 KLHL24Q6TFL4 600 aa2.81□□□□□ -1.96
SYPL1-203ENST00000460770 WDR5BQ86VZ2 330 aa2.81□□□□□ -1.96
SYPL1-203ENST00000460770 ANKRD44Q8N8A2 993 aa2.81□□□□□ -1.96
SYPL1-203ENST00000460770 TEX45Q8NA69 505 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms