RNA–Protein interactions for RNA: ENST00000460428.5

SFPQ-202, Transcript of splicing factor proline and glutamine rich, humanhuman

TSL 2

Gene SFPQ, Length 464 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFPQ-202ENST00000460428 EPHA5P54756 1037 aa8.2□□□□□ -1.1
SFPQ-202ENST00000460428 WDR4P57081 412 aaKnown RBP8.2□□□□□ -1.1
SFPQ-202ENST00000460428 SLC7A9P82251 487 aa8.2□□□□□ -1.1
SFPQ-202ENST00000460428 MSLNQ13421 630 aaPredicted RBP8.2□□□□□ -1.1
SFPQ-202ENST00000460428 RFTN1Q14699 578 aaPredicted RBP8.2□□□□□ -1.1
SFPQ-202ENST00000460428 CRYMQ14894 314 aa8.2□□□□□ -1.1
SFPQ-202ENST00000460428 EFTUD2Q15029 972 aaKnown RBP eCLIP8.2□□□□□ -1.18e-16■■■■□ 25.2
SFPQ-202ENST00000460428 POLD3Q15054 466 aaPredicted RBP8.2□□□□□ -1.1
SFPQ-202ENST00000460428 PCID2Q5JVF3 399 aa8.2□□□□□ -1.1
SFPQ-202ENST00000460428 FAM182AQ5T1J6 154 aa8.2□□□□□ -1.1
SFPQ-202ENST00000460428 SYCP2LQ5T4T6 812 aa8.2□□□□□ -1.1
SFPQ-202ENST00000460428 STXBP5Q5T5C0 1151 aa8.2□□□□□ -1.1
SFPQ-202ENST00000460428 ADGRF1Q5T601 910 aa8.2□□□□□ -1.1
SFPQ-202ENST00000460428 MARC1Q5VT66 337 aa8.2□□□□□ -1.1
SFPQ-202ENST00000460428 RNF43Q68DV7 783 aa8.2□□□□□ -1.1
SFPQ-202ENST00000460428 FAM117BQ6P1L5 589 aa8.2□□□□□ -1.1
SFPQ-202ENST00000460428 TRMT10BQ6PF06 316 aaKnown RBP8.2□□□□□ -1.1
SFPQ-202ENST00000460428 POTEHQ6S545 545 aa8.2□□□□□ -1.1
SFPQ-202ENST00000460428 KDELC1Q6UW63 502 aa8.2□□□□□ -1.1
SFPQ-202ENST00000460428 Q6ZNB5 142 aa8.2□□□□□ -1.1
SFPQ-202ENST00000460428 CCDC149Q6ZUS6 474 aa8.2□□□□□ -1.1
SFPQ-202ENST00000460428 OTOP3Q7RTS5 596 aa8.2□□□□□ -1.1
SFPQ-202ENST00000460428 PIGWQ7Z7B1 504 aa8.2□□□□□ -1.1
SFPQ-202ENST00000460428 SETD3Q86TU7 594 aaPredicted RBP8.2□□□□□ -1.1
SFPQ-202ENST00000460428 SPATS2Q86XZ4 545 aaKnown RBP8.2□□□□□ -1.1
SFPQ-202ENST00000460428 TMC8Q8IU68 726 aa8.2□□□□□ -1.1
SFPQ-202ENST00000460428 SRRM1Q8IYB3 904 aaKnown RBP8.2□□□□□ -1.1
SFPQ-202ENST00000460428 MRPL43Q8N983 215 aaKnown RBP8.2□□□□□ -1.1
SFPQ-202ENST00000460428 KLHL23Q8NBE8 558 aa8.2□□□□□ -1.1
SFPQ-202ENST00000460428 OR52K1Q8NGK4 314 aa8.2□□□□□ -1.1
SFPQ-202ENST00000460428 ACMSDQ8TDX5 336 aa8.2□□□□□ -1.1
SFPQ-202ENST00000460428 CDKL2Q92772 493 aa8.2□□□□□ -1.1
SFPQ-202ENST00000460428 BADQ92934 168 aa8.2□□□□□ -1.1
SFPQ-202ENST00000460428 PEX13Q92968 403 aa8.2□□□□□ -1.1
SFPQ-202ENST00000460428 HMCESQ96FZ2 354 aa8.2□□□□□ -1.1
SFPQ-202ENST00000460428 CHMP6Q96FZ7 201 aa8.2□□□□□ -1.1
SFPQ-202ENST00000460428 CFAP36Q96G28 342 aa8.2□□□□□ -1.1
SFPQ-202ENST00000460428 MRGPRX2Q96LB1 330 aa8.2□□□□□ -1.1
SFPQ-202ENST00000460428 MAGEB18Q96M61 343 aa8.2□□□□□ -1.1
SFPQ-202ENST00000460428 RPRD1AQ96P16 312 aaPredicted RBP8.2□□□□□ -1.1
SFPQ-202ENST00000460428 FCRL3Q96P31 734 aaPredicted RBP8.2□□□□□ -1.1
SFPQ-202ENST00000460428 RANBP9Q96S59 729 aa8.2□□□□□ -1.1
SFPQ-202ENST00000460428 SELENOSQ9BQE4 189 aa8.2□□□□□ -1.1
SFPQ-202ENST00000460428 MCMBPQ9BTE3 642 aa8.2□□□□□ -1.1
SFPQ-202ENST00000460428 ACE2Q9BYF1 805 aaPredicted RBP8.2□□□□□ -1.1
SFPQ-202ENST00000460428 SYBUQ9NX95 663 aa8.2□□□□□ -1.1
SFPQ-202ENST00000460428 PRKAG3Q9UGI9 489 aa8.2□□□□□ -1.1
SFPQ-202ENST00000460428 PRKAG2Q9UGJ0 569 aa8.2□□□□□ -1.1
SFPQ-202ENST00000460428 MAD1L1Q9Y6D9 718 aa8.2□□□□□ -1.1
SFPQ-202ENST00000460428 ALPK3Q96L96 1907 aa8.2□□□□□ -1.1
SFPQ-202ENST00000460428 CEP350Q5VT06 3117 aa8.19□□□□□ -1.1
SFPQ-202ENST00000460428 GOLGA6L7A0A1B0GV03 622 aa8.19□□□□□ -1.1
SFPQ-202ENST00000460428 A0A1B0GVM2 712 aa8.19□□□□□ -1.1
SFPQ-202ENST00000460428 LOC285095A0A1B0GVY8 99 aa8.19□□□□□ -1.1
SFPQ-202ENST00000460428 HMX2A2RU54 273 aa8.19□□□□□ -1.1
SFPQ-202ENST00000460428 TCAF2A6NFQ2 919 aa8.19□□□□□ -1.1
SFPQ-202ENST00000460428 J3KR12 359 aa8.19□□□□□ -1.1
SFPQ-202ENST00000460428 PRRG1O14668 218 aa8.19□□□□□ -1.1
SFPQ-202ENST00000460428 KDELR3O43731 214 aa8.19□□□□□ -1.1
SFPQ-202ENST00000460428 SIN3BO75182 1162 aa8.19□□□□□ -1.1
SFPQ-202ENST00000460428 RFPL1O75677 317 aa8.19□□□□□ -1.1
SFPQ-202ENST00000460428 PAPSS2O95340 614 aaPredicted RBP8.19□□□□□ -1.1
SFPQ-202ENST00000460428 CXCL14O95715 111 aa8.19□□□□□ -1.1
SFPQ-202ENST00000460428 ADH1AP07327 375 aa8.19□□□□□ -1.1
SFPQ-202ENST00000460428 MMP2P08253 660 aa8.19□□□□□ -1.1
SFPQ-202ENST00000460428 EN2P19622 333 aaPredicted RBP8.19□□□□□ -1.1
SFPQ-202ENST00000460428 CES1P23141 567 aa8.19□□□□□ -1.1
SFPQ-202ENST00000460428 HOXD9P28356 352 aaPredicted RBP8.19□□□□□ -1.1
SFPQ-202ENST00000460428 OR1E1P30953 314 aa8.19□□□□□ -1.1
SFPQ-202ENST00000460428 MAGEA12P43365 314 aa8.19□□□□□ -1.1
SFPQ-202ENST00000460428 NEK3P51956 506 aa8.19□□□□□ -1.1
SFPQ-202ENST00000460428 SEC24CP53992 1094 aa8.19□□□□□ -1.1
SFPQ-202ENST00000460428 SESN2P58004 480 aaPredicted RBP8.19□□□□□ -1.1
SFPQ-202ENST00000460428 GNA12Q03113 381 aa8.19□□□□□ -1.1
SFPQ-202ENST00000460428 MGAT5Q09328 741 aa8.19□□□□□ -1.1
SFPQ-202ENST00000460428 SLC10A7Q0GE19 358 aa8.19□□□□□ -1.1
SFPQ-202ENST00000460428 SPARCL1Q14515 664 aa8.19□□□□□ -1.1
SFPQ-202ENST00000460428 TAF12Q16514 161 aa8.19□□□□□ -1.1
SFPQ-202ENST00000460428 SKIDA1Q1XH10 827 aa8.19□□□□□ -1.1
SFPQ-202ENST00000460428 ANKRD20A4Q4UJ75 823 aa8.19□□□□□ -1.1
SFPQ-202ENST00000460428 RABGAP1LQ5R372 815 aa8.19□□□□□ -1.1
SFPQ-202ENST00000460428 GRTP1Q5TC63 336 aa8.19□□□□□ -1.1
SFPQ-202ENST00000460428 TTC19Q6DKK2 380 aaPredicted RBP8.19□□□□□ -1.1
SFPQ-202ENST00000460428 PKN3Q6P5Z2 889 aa8.19□□□□□ -1.1
SFPQ-202ENST00000460428 CAPN12Q6ZSI9 719 aa8.19□□□□□ -1.1
SFPQ-202ENST00000460428 HTR3DQ70Z44 454 aa8.19□□□□□ -1.1
SFPQ-202ENST00000460428 CNTN4Q8IWV2 1026 aa8.19□□□□□ -1.1
SFPQ-202ENST00000460428 LGI2Q8N0V4 545 aa8.19□□□□□ -1.1
SFPQ-202ENST00000460428 CPXM2Q8N436 756 aa8.19□□□□□ -1.1
SFPQ-202ENST00000460428 PPM1NQ8N819 430 aa8.19□□□□□ -1.1
SFPQ-202ENST00000460428 ARRDC2Q8TBH0 407 aa8.19□□□□□ -1.1
SFPQ-202ENST00000460428 SPPL3Q8TCT6 385 aa8.19□□□□□ -1.1
SFPQ-202ENST00000460428 ADAMTS19Q8TE59 1207 aa8.19□□□□□ -1.1
SFPQ-202ENST00000460428 ZNF473Q8WTR7 871 aaKnown RBP8.19□□□□□ -1.1
SFPQ-202ENST00000460428 NSMCE1Q8WV22 266 aa8.19□□□□□ -1.1
SFPQ-202ENST00000460428 AUTS2Q8WXX7 1259 aa8.19□□□□□ -1.1
SFPQ-202ENST00000460428 MYEOVQ96EZ4 313 aa8.19□□□□□ -1.1
SFPQ-202ENST00000460428 CERS2Q96G23 380 aa8.19□□□□□ -1.1
SFPQ-202ENST00000460428 PSKH2Q96QS6 385 aa8.19□□□□□ -1.1
SFPQ-202ENST00000460428 CPNE1Q99829 537 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms