RNA–Protein interactions for RNA: ENST00000459947.5

UBR4-208, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 3,873 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-208ENST00000459947 H0Y858 1186 aa10.92□□□□□ -0.66
UBR4-208ENST00000459947 MAP3K13O43283 966 aa10.92□□□□□ -0.66
UBR4-208ENST00000459947 NDUFS2O75306 463 aa10.92□□□□□ -0.66
UBR4-208ENST00000459947 ZMPSTE24O75844 475 aa10.92□□□□□ -0.66
UBR4-208ENST00000459947 GGCXP38435 758 aa10.92□□□□□ -0.66
UBR4-208ENST00000459947 PAFAH1B3Q15102 231 aaKnown RBP10.92□□□□□ -0.66
UBR4-208ENST00000459947 PPP2R5EQ16537 467 aa10.92□□□□□ -0.66
UBR4-208ENST00000459947 ACCSLQ4AC99 568 aa10.92□□□□□ -0.66
UBR4-208ENST00000459947 CYP4V2Q6ZWL3 525 aaPredicted RBP10.92□□□□□ -0.66
UBR4-208ENST00000459947 TMPRSS6Q8IU80 811 aa10.92□□□□□ -0.66
UBR4-208ENST00000459947 OR7D4Q8NG98 312 aa10.92□□□□□ -0.66
UBR4-208ENST00000459947 KIAA1524Q8TCG1 905 aa10.92□□□□□ -0.66
UBR4-208ENST00000459947 HCAR2Q8TDS4 363 aa10.92□□□□□ -0.66
UBR4-208ENST00000459947 LRRC19Q9H756 370 aa10.92□□□□□ -0.66
UBR4-208ENST00000459947 ZDHHC4Q9NPG8 344 aa10.92□□□□□ -0.66
UBR4-208ENST00000459947 ITM2CQ9NQX7 267 aa10.92□□□□□ -0.66
UBR4-208ENST00000459947 USP36Q9P275 1121 aaKnown RBP10.92□□□□□ -0.66
UBR4-208ENST00000459947 AMFRQ9UKV5 643 aa10.92□□□□□ -0.66
UBR4-208ENST00000459947 FAM72CH0Y354 149 aa10.92□□□□□ -0.66
UBR4-208ENST00000459947 BUB1O43683 1085 aa10.92□□□□□ -0.66
UBR4-208ENST00000459947 SRCP12931 536 aa10.92□□□□□ -0.66
UBR4-208ENST00000459947 ARSEP51690 589 aa10.92□□□□□ -0.66
UBR4-208ENST00000459947 DLG2Q15700 870 aa10.92□□□□□ -0.66
UBR4-208ENST00000459947 FAM72AQ5TYM5 149 aa10.92□□□□□ -0.66
UBR4-208ENST00000459947 FAM72DQ6L9T8 149 aa10.92□□□□□ -0.66
UBR4-208ENST00000459947 FAM72BQ86X60 149 aa10.92□□□□□ -0.66
UBR4-208ENST00000459947 ATPAF2Q8N5M1 289 aa10.92□□□□□ -0.66
UBR4-208ENST00000459947 OSGEPQ9NPF4 335 aa10.92□□□□□ -0.66
UBR4-208ENST00000459947 TMPRSS4Q9NRS4 437 aa10.92□□□□□ -0.66
UBR4-208ENST00000459947 DNAI1Q9UI46 699 aa10.92□□□□□ -0.66
UBR4-208ENST00000459947 HCN2Q9UL51 889 aa10.92□□□□□ -0.66
UBR4-208ENST00000459947 MCF2LO15068 1137 aa10.92□□□□□ -0.66
UBR4-208ENST00000459947 DCLK1O15075 740 aa10.92□□□□□ -0.66
UBR4-208ENST00000459947 PRAMEF11O60813 436 aa10.92□□□□□ -0.66
UBR4-208ENST00000459947 GOT1P17174 413 aa10.92□□□□□ -0.66
UBR4-208ENST00000459947 WASP42768 502 aa10.92□□□□□ -0.66
UBR4-208ENST00000459947 IRAK1P51617 712 aa10.92□□□□□ -0.66
UBR4-208ENST00000459947 MESP2Q0VG99 397 aa10.92□□□□□ -0.66
UBR4-208ENST00000459947 CARD16Q5EG05 197 aa10.92□□□□□ -0.66
UBR4-208ENST00000459947 DAAM2Q86T65 1068 aa10.92□□□□□ -0.66
UBR4-208ENST00000459947 LRRC8AQ8IWT6 810 aa10.92□□□□□ -0.66
UBR4-208ENST00000459947 PYROXD2Q8N2H3 581 aa10.92□□□□□ -0.66
UBR4-208ENST00000459947 EXD1Q8NHP7 514 aa10.92□□□□□ -0.66
UBR4-208ENST00000459947 ACOX2Q99424 681 aa10.92□□□□□ -0.66
UBR4-208ENST00000459947 CD248Q9HCU0 757 aa10.92□□□□□ -0.66
UBR4-208ENST00000459947 SEPT3Q9UH03 358 aa10.92□□□□□ -0.66
UBR4-208ENST00000459947 LRRC72A6NJI9 287 aa10.91□□□□□ -0.66
UBR4-208ENST00000459947 MTSS1O43312 755 aa10.91□□□□□ -0.66
UBR4-208ENST00000459947 NDUFV2P19404 249 aa10.91□□□□□ -0.66
UBR4-208ENST00000459947 COMTP21964 271 aa10.91□□□□□ -0.66
UBR4-208ENST00000459947 KDELR1P24390 212 aa10.91□□□□□ -0.66
UBR4-208ENST00000459947 IL1R2P27930 398 aa10.91□□□□□ -0.66
UBR4-208ENST00000459947 PLA2G5P39877 138 aa10.91□□□□□ -0.66
UBR4-208ENST00000459947 NR2C2P49116 596 aa10.91□□□□□ -0.66
UBR4-208ENST00000459947 WDR45BQ5MNZ6 344 aa10.91□□□□□ -0.66
UBR4-208ENST00000459947 SYCP2LQ5T4T6 812 aa10.91□□□□□ -0.66
UBR4-208ENST00000459947 MDGA1Q8NFP4 955 aa10.91□□□□□ -0.66
UBR4-208ENST00000459947 CADM4Q8NFZ8 388 aa10.91□□□□□ -0.66
UBR4-208ENST00000459947 P2RY11Q96G91 374 aa10.91□□□□□ -0.66
UBR4-208ENST00000459947 MRGPRX1Q96LB2 322 aa10.91□□□□□ -0.66
UBR4-208ENST00000459947 TUBGCP5Q96RT8 1024 aa10.91□□□□□ -0.66
UBR4-208ENST00000459947 HEPHQ9BQS7 1158 aa10.91□□□□□ -0.66
UBR4-208ENST00000459947 CALN1Q9BXU9 219 aa10.91□□□□□ -0.66
UBR4-208ENST00000459947 SMG5Q9UPR3 1016 aaKnown RBP10.91□□□□□ -0.66
UBR4-208ENST00000459947 ALG6Q9Y672 507 aa10.91□□□□□ -0.66
UBR4-208ENST00000459947 CHD5Q8TDI0 1954 aa10.91□□□□□ -0.66
UBR4-208ENST00000459947 LRRD1A4D1F6 860 aa10.91□□□□□ -0.66
UBR4-208ENST00000459947 GOLGA6L9A6NEM1 432 aa10.91□□□□□ -0.66
UBR4-208ENST00000459947 WASH3PC4AMC7 463 aa10.91□□□□□ -0.66
UBR4-208ENST00000459947 ZSCAN12O43309 604 aa10.91□□□□□ -0.66
UBR4-208ENST00000459947 BUB1BO60566 1050 aaPredicted RBP10.91□□□□□ -0.66
UBR4-208ENST00000459947 SIN3BO75182 1162 aa10.91□□□□□ -0.66
UBR4-208ENST00000459947 POP4O95707 220 aaKnown RBP10.91□□□□□ -0.66
UBR4-208ENST00000459947 CD6P30203 668 aa10.91□□□□□ -0.66
UBR4-208ENST00000459947 GJC1P36383 396 aa10.91□□□□□ -0.66
UBR4-208ENST00000459947 RPS14P62263 151 aaKnown RBP10.91□□□□□ -0.66
UBR4-208ENST00000459947 DPYSL3Q14195 570 aa10.91□□□□□ -0.66
UBR4-208ENST00000459947 CA9Q16790 459 aa10.91□□□□□ -0.66
UBR4-208ENST00000459947 RAB6CQ53S08 254 aa10.91□□□□□ -0.66
UBR4-208ENST00000459947 HEATR6Q6AI08 1181 aaKnown RBP10.91□□□□□ -0.66
UBR4-208ENST00000459947 DNAAF5Q86Y56 855 aa10.91□□□□□ -0.66
UBR4-208ENST00000459947 RAB7BQ96AH8 199 aa10.91□□□□□ -0.66
UBR4-208ENST00000459947 MYO19Q96H55 970 aa10.91□□□□□ -0.66
UBR4-208ENST00000459947 BTBD6Q96KE9 485 aa10.91□□□□□ -0.66
UBR4-208ENST00000459947 RAB6CQ9H0N0 254 aa10.91□□□□□ -0.66
UBR4-208ENST00000459947 NCDNQ9UBB6 729 aa10.91□□□□□ -0.66
UBR4-208ENST00000459947 APOL1O14791 398 aa10.91□□□□□ -0.66
UBR4-208ENST00000459947 PPP1R12AO14974 1030 aaPredicted RBP10.91□□□□□ -0.66
UBR4-208ENST00000459947 EPN2O95208 641 aa10.91□□□□□ -0.66
UBR4-208ENST00000459947 KRT10P13645 584 aa10.91□□□□□ -0.66
UBR4-208ENST00000459947 TGM2P21980 687 aa10.91□□□□□ -0.66
UBR4-208ENST00000459947 PTPN7P35236 360 aa10.91□□□□□ -0.66
UBR4-208ENST00000459947 CST6Q15828 149 aa10.91□□□□□ -0.66
UBR4-208ENST00000459947 MAP7D1Q3KQU3 841 aa10.91□□□□□ -0.66
UBR4-208ENST00000459947 ANKRD20A8PQ5CZ79 823 aa10.91□□□□□ -0.66
UBR4-208ENST00000459947 C9orf64Q5T6V5 341 aa10.91□□□□□ -0.66
UBR4-208ENST00000459947 FRS2Q8WU20 508 aa10.91□□□□□ -0.66
UBR4-208ENST00000459947 ADGRG1Q9Y653 693 aa10.91□□□□□ -0.66
UBR4-208ENST00000459947 NYNRINQ9P2P1 1898 aaKnown RBP10.91□□□□□ -0.66
UBR4-208ENST00000459947 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms