RNA–Protein interactions for RNA: ENST00000459667.1

VARS-218, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-218ENST00000459667 SLC8A1P32418 973 aa21.2■□□□□ 0.98
VARS-218ENST00000459667 HTR7P34969 479 aa21.2■□□□□ 0.98
VARS-218ENST00000459667 HOXD12P35452 270 aa21.2■□□□□ 0.98
VARS-218ENST00000459667 PCK1P35558 622 aa21.2■□□□□ 0.98
VARS-218ENST00000459667 ID4P47928 161 aa21.2■□□□□ 0.98
VARS-218ENST00000459667 ARF5P84085 180 aa21.2■□□□□ 0.98
VARS-218ENST00000459667 TBX2Q13207 712 aaPredicted RBP21.2■□□□□ 0.98
VARS-218ENST00000459667 PIGHQ14442 188 aaPredicted RBP21.2■□□□□ 0.98
VARS-218ENST00000459667 ACAP1Q15027 740 aa21.2■□□□□ 0.98
VARS-218ENST00000459667 POLD3Q15054 466 aaPredicted RBP21.2■□□□□ 0.98
VARS-218ENST00000459667 CA9Q16790 459 aa21.2■□□□□ 0.98
VARS-218ENST00000459667 WDR45BQ5MNZ6 344 aa21.2■□□□□ 0.98
VARS-218ENST00000459667 DAB2IPQ5VWQ8 1189 aa21.2■□□□□ 0.98
VARS-218ENST00000459667 C22orf39Q6P5X5 142 aa21.2■□□□□ 0.98
VARS-218ENST00000459667 CYP4V2Q6ZWL3 525 aaPredicted RBP21.2■□□□□ 0.98
VARS-218ENST00000459667 NETO1Q8TDF5 533 aa21.2■□□□□ 0.98
VARS-218ENST00000459667 MRFAP1L1Q96HT8 127 aa21.2■□□□□ 0.98
VARS-218ENST00000459667 CCDC114Q96M63 670 aa21.2■□□□□ 0.98
VARS-218ENST00000459667 EIF3CQ99613 913 aaKnown RBP21.2■□□□□ 0.98
VARS-218ENST00000459667 OMDQ99983 421 aa21.2■□□□□ 0.98
VARS-218ENST00000459667 SGK2Q9HBY8 427 aa21.2■□□□□ 0.98
VARS-218ENST00000459667 SERGEFQ9UGK8 458 aa21.2■□□□□ 0.98
VARS-218ENST00000459667 CDV3Q9UKY7 258 aaKnown RBP21.2■□□□□ 0.98
VARS-218ENST00000459667 NUMA1Q14980 2115 aa21.2■□□□□ 0.98
VARS-218ENST00000459667 GON4LQ3T8J9 2241 aa21.2■□□□□ 0.98
VARS-218ENST00000459667 WASH4PA8MWX3 477 aa21.19■□□□□ 0.98
VARS-218ENST00000459667 EEF2KO00418 725 aaKnown RBP21.19■□□□□ 0.98
VARS-218ENST00000459667 ALOX15BO15296 676 aa21.19■□□□□ 0.98
VARS-218ENST00000459667 RNASEH2AO75792 299 aaKnown RBP21.19■□□□□ 0.98
VARS-218ENST00000459667 SEMA4FO95754 770 aa21.19■□□□□ 0.98
VARS-218ENST00000459667 C5AR1P21730 350 aa21.19■□□□□ 0.98
VARS-218ENST00000459667 SERPINH1P50454 418 aaKnown RBP21.19■□□□□ 0.98
VARS-218ENST00000459667 ZNF75DP51815 510 aa21.19■□□□□ 0.98
VARS-218ENST00000459667 SLC20A2Q08357 652 aa21.19■□□□□ 0.98
VARS-218ENST00000459667 TRIM61Q5EBN2 209 aa21.19■□□□□ 0.98
VARS-218ENST00000459667 DCAF12L1Q5VU92 463 aa21.19■□□□□ 0.98
VARS-218ENST00000459667 PSTKQ8IV42 348 aaKnown RBP21.19■□□□□ 0.98
VARS-218ENST00000459667 CTNNBL1Q8WYA6 563 aaPredicted RBP21.19■□□□□ 0.98
VARS-218ENST00000459667 BTBD6Q96KE9 485 aa21.19■□□□□ 0.98
VARS-218ENST00000459667 KCTD15Q96SI1 283 aaPredicted RBP21.19■□□□□ 0.98
VARS-218ENST00000459667 CHP1Q99653 195 aa21.19■□□□□ 0.98
VARS-218ENST00000459667 PCED1AQ9H1Q7 454 aa21.19■□□□□ 0.98
VARS-218ENST00000459667 RXFP3Q9NSD7 469 aa21.19■□□□□ 0.98
VARS-218ENST00000459667 IP6K2Q9UHH9 426 aa21.19■□□□□ 0.98
VARS-218ENST00000459667 EVLQ9UI08 416 aaPredicted RBP21.19■□□□□ 0.98
VARS-218ENST00000459667 HPCAL4Q9UM19 191 aa21.19■□□□□ 0.98
VARS-218ENST00000459667 FARP1Q9Y4F1 1045 aaPredicted RBP21.19■□□□□ 0.98
VARS-218ENST00000459667 CEP250Q9BV73 2442 aa21.18■□□□□ 0.98
VARS-218ENST00000459667 CXorf51AA0A1B0GTR3 108 aa21.18■□□□□ 0.98
VARS-218ENST00000459667 METTL12A8MUP2 240 aa21.18■□□□□ 0.98
VARS-218ENST00000459667 MCF2LO15068 1137 aa21.18■□□□□ 0.98
VARS-218ENST00000459667 SDHBP21912 280 aa21.18■□□□□ 0.98
VARS-218ENST00000459667 RABEPKQ7Z6M1 372 aa21.18■□□□□ 0.98
VARS-218ENST00000459667 ZNF354CQ86Y25 554 aa21.18■□□□□ 0.98
VARS-218ENST00000459667 AADATQ8N5Z0 425 aa21.18■□□□□ 0.98
VARS-218ENST00000459667 NIPA2Q8N8Q9 360 aa21.18■□□□□ 0.98
VARS-218ENST00000459667 CEP76Q8TAP6 659 aa21.18■□□□□ 0.98
VARS-218ENST00000459667 ZNF564Q8TBZ8 553 aaPredicted RBP21.18■□□□□ 0.98
VARS-218ENST00000459667 CCDC42Q96M95 316 aa21.18■□□□□ 0.98
VARS-218ENST00000459667 EDEM2Q9BV94 578 aa21.18■□□□□ 0.98
VARS-218ENST00000459667 NUSAP1Q9BXS6 441 aaKnown RBP21.18■□□□□ 0.98
VARS-218ENST00000459667 PACSIN1Q9BY11 444 aa21.18■□□□□ 0.98
VARS-218ENST00000459667 NEUROG2Q9H2A3 272 aa21.18■□□□□ 0.98
VARS-218ENST00000459667 TNKS2Q9H2K2 1166 aa21.18■□□□□ 0.98
VARS-218ENST00000459667 C6orf106Q9H6K1 298 aaPredicted RBP21.18■□□□□ 0.98
VARS-218ENST00000459667 NOL6Q9H6R4 1146 aaKnown RBP21.18■□□□□ 0.98
VARS-218ENST00000459667 NHEJ1Q9H9Q4 299 aaPredicted RBP21.18■□□□□ 0.98
VARS-218ENST00000459667 CTTNBP2NLQ9P2B4 639 aa21.18■□□□□ 0.98
VARS-218ENST00000459667 FZD4Q9ULV1 537 aa21.18■□□□□ 0.98
VARS-218ENST00000459667 LNP1A1A4G5 178 aa21.17■□□□□ 0.98
VARS-218ENST00000459667 C1QTNF3-AMACRE9PGA6 284 aa21.17■□□□□ 0.98
VARS-218ENST00000459667 CFIP05156 583 aa21.17■□□□□ 0.98
VARS-218ENST00000459667 H2AFZP0C0S5 128 aa21.17■□□□□ 0.98
VARS-218ENST00000459667 MAOBP27338 520 aa21.17■□□□□ 0.98
VARS-218ENST00000459667 IL1R2P27930 398 aa21.17■□□□□ 0.98
VARS-218ENST00000459667 GEMIN4P57678 1058 aaKnown RBP21.17■□□□□ 0.98
VARS-218ENST00000459667 IRX4P78413 519 aa21.17■□□□□ 0.98
VARS-218ENST00000459667 DUOXA1Q1HG43 343 aa21.17■□□□□ 0.98
VARS-218ENST00000459667 PPP6R3Q5H9R7 873 aaPredicted RBP21.17■□□□□ 0.98
VARS-218ENST00000459667 FAM46CQ5VWP2 391 aa21.17■□□□□ 0.98
VARS-218ENST00000459667 SLC23A3Q6PIS1 610 aa21.17■□□□□ 0.98
VARS-218ENST00000459667 H2AFVQ71UI9 128 aa21.17■□□□□ 0.98
VARS-218ENST00000459667 HDDC3Q8N4P3 179 aa21.17■□□□□ 0.98
VARS-218ENST00000459667 OR2A12Q8NGT7 310 aa21.17■□□□□ 0.98
VARS-218ENST00000459667 PIP4K2CQ8TBX8 421 aa21.17■□□□□ 0.98
VARS-218ENST00000459667 SNX19Q92543 992 aa21.17■□□□□ 0.98
VARS-218ENST00000459667 CEP44Q9C0F1 390 aa21.17■□□□□ 0.98
VARS-218ENST00000459667 SPTLC3Q9NUV7 552 aa21.17■□□□□ 0.98
VARS-218ENST00000459667 DLL3Q9NYJ7 618 aa21.17■□□□□ 0.98
VARS-218ENST00000459667 SUSD2Q9UGT4 822 aa21.17■□□□□ 0.98
VARS-218ENST00000459667 SARDHQ9UL12 918 aa21.17■□□□□ 0.98
VARS-218ENST00000459667 PPM1HQ9ULR3 514 aa21.17■□□□□ 0.98
VARS-218ENST00000459667 FCF1Q9Y324 198 aaKnown RBP21.17■□□□□ 0.98
VARS-218ENST00000459667 ACTL7AQ9Y615 435 aa21.17■□□□□ 0.98
VARS-218ENST00000459667 DMXL1Q9Y485 3027 aa21.17■□□□□ 0.98
VARS-218ENST00000459667 PI4KAP42356 2102 aa21.16■□□□□ 0.98
VARS-218ENST00000459667 MYO1FO00160 1098 aa21.16■□□□□ 0.98
VARS-218ENST00000459667 DAPK3O43293 454 aa21.16■□□□□ 0.98
VARS-218ENST00000459667 KDELR3O43731 214 aa21.16■□□□□ 0.98
VARS-218ENST00000459667 CD160O95971 181 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms