RNA–Protein interactions for RNA: ENST00000458610.6

CD28-203, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-203ENST00000458610 NUMBP49757 651 aa16.5■□□□□ 0.23
CD28-203ENST00000458610 SERPINH1P50454 418 aaKnown RBP16.5■□□□□ 0.23
CD28-203ENST00000458610 RFX8Q6ZV50 586 aa16.5■□□□□ 0.23
CD28-203ENST00000458610 CACUL1Q86Y37 369 aa16.5■□□□□ 0.23
CD28-203ENST00000458610 PLPP6Q8IY26 295 aa16.5■□□□□ 0.23
CD28-203ENST00000458610 LZTR1Q8N653 840 aa16.5■□□□□ 0.23
CD28-203ENST00000458610 PCDH20Q8N6Y1 951 aaKnown RBP16.5■□□□□ 0.23
CD28-203ENST00000458610 CEP76Q8TAP6 659 aa16.5■□□□□ 0.23
CD28-203ENST00000458610 PIGKQ92643 395 aa16.5■□□□□ 0.23
CD28-203ENST00000458610 ISG20Q96AZ6 181 aaKnown RBP16.5■□□□□ 0.23
CD28-203ENST00000458610 PEBP4Q96S96 227 aa16.5■□□□□ 0.23
CD28-203ENST00000458610 GPR174Q9BXC1 333 aa16.5■□□□□ 0.23
CD28-203ENST00000458610 GPATCH2LQ9NWQ4 482 aa16.5■□□□□ 0.23
CD28-203ENST00000458610 IMPACTQ9P2X3 320 aa16.5■□□□□ 0.23
CD28-203ENST00000458610 SUSD2Q9UGT4 822 aa16.5■□□□□ 0.23
CD28-203ENST00000458610 FZD4Q9ULV1 537 aa16.5■□□□□ 0.23
CD28-203ENST00000458610 NEU3Q9UQ49 428 aa16.5■□□□□ 0.23
CD28-203ENST00000458610 WDFY4Q6ZS81 3184 aa16.49■□□□□ 0.23
CD28-203ENST00000458610 ARHGAP42A6NI28 874 aa16.49■□□□□ 0.23
CD28-203ENST00000458610 RASA4BC9J798 803 aa16.49■□□□□ 0.23
CD28-203ENST00000458610 KHNYNO15037 678 aaKnown RBP16.49■□□□□ 0.23
CD28-203ENST00000458610 RASA4O43374 803 aa16.49■□□□□ 0.23
CD28-203ENST00000458610 BUB1O43683 1085 aa16.49■□□□□ 0.23
CD28-203ENST00000458610 BNIP3LO60238 219 aa16.49■□□□□ 0.23
CD28-203ENST00000458610 MT-CO1P00395 513 aa16.49■□□□□ 0.23
CD28-203ENST00000458610 PRNPP04156 253 aa16.49■□□□□ 0.23
CD28-203ENST00000458610 KRT7P08729 469 aa16.49■□□□□ 0.23
CD28-203ENST00000458610 RARAP10276 462 aa16.49■□□□□ 0.23
CD28-203ENST00000458610 GNSP15586 552 aa16.49■□□□□ 0.23
CD28-203ENST00000458610 GOT1P17174 413 aa16.49■□□□□ 0.23
CD28-203ENST00000458610 MAN1A1P33908 653 aa16.49■□□□□ 0.23
CD28-203ENST00000458610 ACVRL1P37023 503 aa16.49■□□□□ 0.23
CD28-203ENST00000458610 MAGEA1P43355 309 aa16.49■□□□□ 0.23
CD28-203ENST00000458610 DPYSL2Q16555 572 aa16.49■□□□□ 0.23
CD28-203ENST00000458610 CA9Q16790 459 aa16.49■□□□□ 0.23
CD28-203ENST00000458610 PLA2G2CQ5R387 149 aa16.49■□□□□ 0.23
CD28-203ENST00000458610 LINGO4Q6UY18 593 aa16.49■□□□□ 0.23
CD28-203ENST00000458610 Q6ZVU0 165 aa16.49■□□□□ 0.23
CD28-203ENST00000458610 FAM124AQ86V42 546 aa16.49■□□□□ 0.23
CD28-203ENST00000458610 MAP7D3Q8IWC1 876 aa16.49■□□□□ 0.23
CD28-203ENST00000458610 RGL4Q8IZJ4 473 aa16.49■□□□□ 0.23
CD28-203ENST00000458610 TMIEQ8NEW7 156 aa16.49■□□□□ 0.23
CD28-203ENST00000458610 SLC35G2Q8TBE7 412 aa16.49■□□□□ 0.23
CD28-203ENST00000458610 HSPH1Q92598 858 aa16.49■□□□□ 0.23
CD28-203ENST00000458610 KCTD15Q96SI1 283 aaPredicted RBP16.49■□□□□ 0.23
CD28-203ENST00000458610 PACSIN1Q9BY11 444 aa16.49■□□□□ 0.23
CD28-203ENST00000458610 NDFIP2Q9NV92 336 aa16.49■□□□□ 0.23
CD28-203ENST00000458610 PPM1HQ9ULR3 514 aa16.49■□□□□ 0.23
CD28-203ENST00000458610 TPX2Q9ULW0 747 aaKnown RBP16.49■□□□□ 0.23
CD28-203ENST00000458610 RIF1Q5UIP0 2472 aaKnown RBP16.48■□□□□ 0.23
CD28-203ENST00000458610 LRRC72A6NJI9 287 aa16.48■□□□□ 0.23
CD28-203ENST00000458610 METTL12A8MUP2 240 aa16.48■□□□□ 0.23
CD28-203ENST00000458610 MEI4A8MW99 385 aa16.48■□□□□ 0.23
CD28-203ENST00000458610 RNASEH2AO75792 299 aaKnown RBP16.48■□□□□ 0.23
CD28-203ENST00000458610 ERCC2P18074 760 aa16.48■□□□□ 0.23
CD28-203ENST00000458610 TGM1P22735 817 aa16.48■□□□□ 0.23
CD28-203ENST00000458610 CDC25BP30305 580 aa16.48■□□□□ 0.23
CD28-203ENST00000458610 CHRNA3P32297 505 aa16.48■□□□□ 0.23
CD28-203ENST00000458610 PTGER3P43115 390 aa16.48■□□□□ 0.23
CD28-203ENST00000458610 PSMD8P48556 350 aa16.48■□□□□ 0.23
CD28-203ENST00000458610 DNA2P51530 1060 aa16.48■□□□□ 0.23
CD28-203ENST00000458610 ARF5P84085 180 aa16.48■□□□□ 0.23
CD28-203ENST00000458610 KRT81Q14533 505 aa16.48■□□□□ 0.23
CD28-203ENST00000458610 INO80DQ53TQ3 878 aaPredicted RBP16.48■□□□□ 0.23
CD28-203ENST00000458610 CARD16Q5EG05 197 aa16.48■□□□□ 0.23
CD28-203ENST00000458610 KCNT1Q5JUK3 1230 aa16.48■□□□□ 0.23
CD28-203ENST00000458610 C22orf39Q6P5X5 142 aa16.48■□□□□ 0.23
CD28-203ENST00000458610 PRR23CQ6ZRP0 262 aa16.48■□□□□ 0.23
CD28-203ENST00000458610 ARMCX6Q7L4S7 300 aa16.48■□□□□ 0.23
CD28-203ENST00000458610 HDDC3Q8N4P3 179 aa16.48■□□□□ 0.23
CD28-203ENST00000458610 DEFB119Q8N690 84 aa16.48■□□□□ 0.23
CD28-203ENST00000458610 RFFLQ8WZ73 363 aa16.48■□□□□ 0.23
CD28-203ENST00000458610 BTBD6Q96KE9 485 aa16.48■□□□□ 0.23
CD28-203ENST00000458610 HSPA12BQ96MM6 686 aa16.48■□□□□ 0.23
CD28-203ENST00000458610 DYRK4Q9NR20 520 aa16.48■□□□□ 0.23
CD28-203ENST00000458610 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.48■□□□□ 0.23
CD28-203ENST00000458610 CWC15Q9P013 229 aaKnown RBP16.48■□□□□ 0.23
CD28-203ENST00000458610 RCOR3Q9P2K3 495 aaPredicted RBP16.48■□□□□ 0.23
CD28-203ENST00000458610 CKAP5Q14008 2032 aa16.48■□□□□ 0.23
CD28-203ENST00000458610 FAM186AA6NE01 2351 aa16.48■□□□□ 0.23
CD28-203ENST00000458610 K7ERQ8 282 aa16.47■□□□□ 0.23
CD28-203ENST00000458610 MID1O15344 667 aa16.47■□□□□ 0.23
CD28-203ENST00000458610 SLC7A4O43246 635 aa16.47■□□□□ 0.23
CD28-203ENST00000458610 SMAD6O43541 496 aaKnown RBP16.47■□□□□ 0.23
CD28-203ENST00000458610 MTA2O94776 668 aa16.47■□□□□ 0.23
CD28-203ENST00000458610 LCA5LO95447 670 aa16.47■□□□□ 0.23
CD28-203ENST00000458610 SEMA4FO95754 770 aa16.47■□□□□ 0.23
CD28-203ENST00000458610 VAV1P15498 845 aa16.47■□□□□ 0.23
CD28-203ENST00000458610 GLDCP23378 1020 aa16.47■□□□□ 0.23
CD28-203ENST00000458610 IL1R2P27930 398 aa16.47■□□□□ 0.23
CD28-203ENST00000458610 SLC1A1P43005 524 aa16.47■□□□□ 0.23
CD28-203ENST00000458610 SNRPD1P62314 119 aaKnown RBP16.47■□□□□ 0.23
CD28-203ENST00000458610 RAD51Q06609 339 aa16.47■□□□□ 0.23
CD28-203ENST00000458610 SERINC3Q13530 473 aa16.47■□□□□ 0.23
CD28-203ENST00000458610 PDK2Q15119 407 aa16.47■□□□□ 0.23
CD28-203ENST00000458610 TCEAL1Q15170 157 aa16.47■□□□□ 0.23
CD28-203ENST00000458610 DUOXA1Q1HG43 343 aa16.47■□□□□ 0.23
CD28-203ENST00000458610 SMTNL2Q2TAL5 461 aa16.47■□□□□ 0.23
CD28-203ENST00000458610 CYP4V2Q6ZWL3 525 aaPredicted RBP16.47■□□□□ 0.23
CD28-203ENST00000458610 KCTD6Q8NC69 237 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms