RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 CHRNA3P32297 505 aa22.06■■□□□ 1.12
CPNE1-220ENST00000458038 SCNN1AP37088 669 aa22.06■■□□□ 1.12
CPNE1-220ENST00000458038 TAS2R38P59533 333 aa22.06■■□□□ 1.12
CPNE1-220ENST00000458038 PROX2Q3B8N5 592 aa22.06■■□□□ 1.12
CPNE1-220ENST00000458038 PIP5KL1Q5T9C9 394 aa22.06■■□□□ 1.12
CPNE1-220ENST00000458038 C14orf80Q86SX3 495 aa22.06■■□□□ 1.12
CPNE1-220ENST00000458038 ATP11CQ8NB49 1132 aa22.06■■□□□ 1.12
CPNE1-220ENST00000458038 TMEM145Q8NBT3 493 aa22.06■■□□□ 1.12
CPNE1-220ENST00000458038 BAP1Q92560 729 aa22.06■■□□□ 1.12
CPNE1-220ENST00000458038 NT5C3BQ969T7 300 aa22.06■■□□□ 1.12
CPNE1-220ENST00000458038 DCBLD2Q96PD2 775 aa22.06■■□□□ 1.12
CPNE1-220ENST00000458038 NPY6RQ99463 290 aa22.06■■□□□ 1.12
CPNE1-220ENST00000458038 TKTL2Q9H0I9 626 aa22.06■■□□□ 1.12
CPNE1-220ENST00000458038 KLHL11Q9NVR0 708 aa22.06■■□□□ 1.12
CPNE1-220ENST00000458038 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP22.06■■□□□ 1.12
CPNE1-220ENST00000458038 ERBB2P04626 1255 aa22.05■■□□□ 1.12
CPNE1-220ENST00000458038 RHOCP08134 193 aa22.05■■□□□ 1.12
CPNE1-220ENST00000458038 AKT2P31751 481 aa22.05■■□□□ 1.12
CPNE1-220ENST00000458038 EIF2S3P41091 472 aaKnown RBP22.05■■□□□ 1.12
CPNE1-220ENST00000458038 IRAK1P51617 712 aa22.05■■□□□ 1.12
CPNE1-220ENST00000458038 SEMG2Q02383 582 aa22.05■■□□□ 1.12
CPNE1-220ENST00000458038 POM121L1PQ3SYA9 428 aa22.05■■□□□ 1.12
CPNE1-220ENST00000458038 HORMAD1Q86X24 394 aa22.05■■□□□ 1.12
CPNE1-220ENST00000458038 DCP2Q8IU60 420 aaKnown RBP22.05■■□□□ 1.12
CPNE1-220ENST00000458038 DCAF4L2Q8NA75 395 aa22.05■■□□□ 1.12
CPNE1-220ENST00000458038 TMEM35BQ8NCS4 154 aa22.05■■□□□ 1.12
CPNE1-220ENST00000458038 OR2A12Q8NGT7 310 aa22.05■■□□□ 1.12
CPNE1-220ENST00000458038 IFT43Q96FT9 208 aa22.05■■□□□ 1.12
CPNE1-220ENST00000458038 UBL7Q96S82 380 aaPredicted RBP22.05■■□□□ 1.12
CPNE1-220ENST00000458038 PIGVQ9NUD9 493 aa22.05■■□□□ 1.12
CPNE1-220ENST00000458038 KALRNO60229 2985 aa22.04■■□□□ 1.12
CPNE1-220ENST00000458038 DRGXA6NNA5 263 aa22.04■■□□□ 1.12
CPNE1-220ENST00000458038 FOXN3O00409 490 aaPredicted RBP22.04■■□□□ 1.12
CPNE1-220ENST00000458038 KPNA3O00505 521 aaPredicted RBP22.04■■□□□ 1.12
CPNE1-220ENST00000458038 BNIP3LO60238 219 aa22.04■■□□□ 1.12
CPNE1-220ENST00000458038 ADCY5O95622 1261 aa22.04■■□□□ 1.12
CPNE1-220ENST00000458038 MT-CO1P00395 513 aa22.04■■□□□ 1.12
CPNE1-220ENST00000458038 THEGLP0DJG4 465 aa22.04■■□□□ 1.12
CPNE1-220ENST00000458038 CLCN1P35523 988 aa22.04■■□□□ 1.12
CPNE1-220ENST00000458038 RECQLP46063 649 aaPredicted RBP22.04■■□□□ 1.12
CPNE1-220ENST00000458038 MTIF2P46199 727 aaKnown RBP22.04■■□□□ 1.12
CPNE1-220ENST00000458038 SLC20A2Q08357 652 aa22.04■■□□□ 1.12
CPNE1-220ENST00000458038 KCNMA1Q12791 1236 aa22.04■■□□□ 1.12
CPNE1-220ENST00000458038 PTPN20Q4JDL3 420 aa22.04■■□□□ 1.12
CPNE1-220ENST00000458038 ZNF783Q6ZMS7 281 aa22.04■■□□□ 1.12
CPNE1-220ENST00000458038 PPP1R16AQ96I34 528 aa22.04■■□□□ 1.12
CPNE1-220ENST00000458038 PSMB7Q99436 277 aa22.04■■□□□ 1.12
CPNE1-220ENST00000458038 HDAC8Q9BY41 377 aa22.04■■□□□ 1.12
CPNE1-220ENST00000458038 VPS51Q9UID3 782 aa22.04■■□□□ 1.12
CPNE1-220ENST00000458038 DNAJC12Q9UKB3 198 aa22.04■■□□□ 1.12
CPNE1-220ENST00000458038 CLCA2Q9UQC9 943 aa22.04■■□□□ 1.12
CPNE1-220ENST00000458038 HELZ2Q9BYK8 2649 aaKnown RBP22.03■■□□□ 1.12
CPNE1-220ENST00000458038 A0A1W2PQU0 124 aa22.03■■□□□ 1.12
CPNE1-220ENST00000458038 SLC31A1O15431 190 aa22.03■■□□□ 1.12
CPNE1-220ENST00000458038 GADD45BO75293 160 aaPredicted RBP22.03■■□□□ 1.12
CPNE1-220ENST00000458038 CNTN5O94779 1100 aa22.03■■□□□ 1.12
CPNE1-220ENST00000458038 HNRNPA2B1P22626 353 aaKnown RBP22.03■■□□□ 1.12
CPNE1-220ENST00000458038 GLDCP23378 1020 aa22.03■■□□□ 1.12
CPNE1-220ENST00000458038 DGKAP23743 735 aa22.03■■□□□ 1.12
CPNE1-220ENST00000458038 GABRB2P47870 512 aa22.03■■□□□ 1.12
CPNE1-220ENST00000458038 APBA1Q02410 837 aa22.03■■□□□ 1.12
CPNE1-220ENST00000458038 DEUP1Q05D60 604 aa22.03■■□□□ 1.12
CPNE1-220ENST00000458038 SLC25A52Q3SY17 297 aa22.03■■□□□ 1.12
CPNE1-220ENST00000458038 SLC47A2Q86VL8 602 aa22.03■■□□□ 1.12
CPNE1-220ENST00000458038 IRF2BP1Q8IU81 584 aa22.03■■□□□ 1.12
CPNE1-220ENST00000458038 FAM71AQ8IYT1 594 aa22.03■■□□□ 1.12
CPNE1-220ENST00000458038 ZNF683Q8IZ20 524 aa22.03■■□□□ 1.12
CPNE1-220ENST00000458038 SLC25A45Q8N413 288 aa22.03■■□□□ 1.12
CPNE1-220ENST00000458038 DCBLD1Q8N8Z6 715 aa22.03■■□□□ 1.12
CPNE1-220ENST00000458038 MLKLQ8NB16 471 aa22.03■■□□□ 1.12
CPNE1-220ENST00000458038 OR4C6Q8NH72 309 aa22.03■■□□□ 1.12
CPNE1-220ENST00000458038 SNIP1Q8TAD8 396 aaKnown RBP22.03■■□□□ 1.12
CPNE1-220ENST00000458038 PDCL3Q9H2J4 239 aa22.03■■□□□ 1.12
CPNE1-220ENST00000458038 IGLV3-10A0A075B6K4 115 aa22.02■■□□□ 1.12
CPNE1-220ENST00000458038 TK2O00142 265 aa22.02■■□□□ 1.12
CPNE1-220ENST00000458038 SIGLEC6O43699 453 aa22.02■■□□□ 1.12
CPNE1-220ENST00000458038 CTSLP07711 333 aa22.02■■□□□ 1.12
CPNE1-220ENST00000458038 ALPPL2P10696 532 aa22.02■■□□□ 1.12
CPNE1-220ENST00000458038 CDH5P33151 784 aaPredicted RBP22.02■■□□□ 1.12
CPNE1-220ENST00000458038 RNASE9P60153 205 aaKnown RBP22.02■■□□□ 1.12
CPNE1-220ENST00000458038 TPD52L1Q16890 204 aaPredicted RBP22.02■■□□□ 1.12
CPNE1-220ENST00000458038 ZNF284Q2VY69 593 aa22.02■■□□□ 1.12
CPNE1-220ENST00000458038 ALFQ53S48 1182 aa22.02■■□□□ 1.12
CPNE1-220ENST00000458038 RETSATQ6NUM9 610 aa22.02■■□□□ 1.12
CPNE1-220ENST00000458038 ERN2Q76MJ5 926 aaKnown RBP22.02■■□□□ 1.12
CPNE1-220ENST00000458038 ZSCAN30Q86W11 494 aa22.02■■□□□ 1.12
CPNE1-220ENST00000458038 FAM114A1Q8IWE2 563 aa22.02■■□□□ 1.12
CPNE1-220ENST00000458038 FGF11Q92914 225 aa22.02■■□□□ 1.12
CPNE1-220ENST00000458038 C18orf8Q96DM3 657 aa22.02■■□□□ 1.12
CPNE1-220ENST00000458038 BBC3Q96PG8 261 aaPredicted RBP22.02■■□□□ 1.12
CPNE1-220ENST00000458038 HAPLN3Q96S86 360 aa22.02■■□□□ 1.12
CPNE1-220ENST00000458038 SIX2Q9NPC8 291 aa22.02■■□□□ 1.12
CPNE1-220ENST00000458038 EVA1BQ9NVM1 165 aa22.02■■□□□ 1.12
CPNE1-220ENST00000458038 IL36AQ9UHA7 158 aa22.02■■□□□ 1.12
CPNE1-220ENST00000458038 ILVBLA1L0T0 632 aa22.01■■□□□ 1.11
CPNE1-220ENST00000458038 NEMP2A6NFY4 417 aa22.01■■□□□ 1.11
CPNE1-220ENST00000458038 TRIM38O00635 465 aa22.01■■□□□ 1.11
CPNE1-220ENST00000458038 SNAP91O60641 907 aa22.01■■□□□ 1.11
CPNE1-220ENST00000458038 SDC3O75056 442 aa22.01■■□□□ 1.11
CPNE1-220ENST00000458038 OR1E1P30953 314 aa22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms