RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 SLC27A5Q9Y2P5 690 aa19.93■□□□□ 0.78
SNX27-204ENST00000458013 A0A087X1B8 175 aa19.92■□□□□ 0.78
SNX27-204ENST00000458013 AVILO75366 819 aa19.92■□□□□ 0.78
SNX27-204ENST00000458013 IGSF6O95976 241 aa19.92■□□□□ 0.78
SNX27-204ENST00000458013 MAXP61244 160 aa19.92■□□□□ 0.78
SNX27-204ENST00000458013 INSCQ1MX18 579 aa19.92■□□□□ 0.78
SNX27-204ENST00000458013 METTL7BQ6UX53 244 aa19.92■□□□□ 0.78
SNX27-204ENST00000458013 CLEC4MQ9H2X3 399 aaPredicted RBP19.92■□□□□ 0.78
SNX27-204ENST00000458013 UBAP1Q9NZ09 502 aa19.92■□□□□ 0.78
SNX27-204ENST00000458013 UBA2Q9UBT2 640 aaPredicted RBP19.92■□□□□ 0.78
SNX27-204ENST00000458013 ANKRD6Q9Y2G4 727 aa19.92■□□□□ 0.78
SNX27-204ENST00000458013 C1QBPQ07021 282 aaKnown RBP19.92■□□□□ 0.78
SNX27-204ENST00000458013 FNBP1LQ5T0N5 605 aa19.92■□□□□ 0.78
SNX27-204ENST00000458013 SVOPQ8N4V2 548 aa19.92■□□□□ 0.78
SNX27-204ENST00000458013 PDCD2LQ9BRP1 358 aa19.92■□□□□ 0.78
SNX27-204ENST00000458013 GDF3Q9NR23 364 aa19.92■□□□□ 0.78
SNX27-204ENST00000458013 C2orf71A6NGG8 1288 aa19.92■□□□□ 0.78
SNX27-204ENST00000458013 MAPKAPK2P49137 400 aa19.92■□□□□ 0.78
SNX27-204ENST00000458013 PSMD7P51665 324 aa19.92■□□□□ 0.78
SNX27-204ENST00000458013 HIRAP54198 1017 aaPredicted RBP19.92■□□□□ 0.78
SNX27-204ENST00000458013 HSPA14Q0VDF9 509 aa19.92■□□□□ 0.78
SNX27-204ENST00000458013 ABRQ12979 859 aa19.92■□□□□ 0.78
SNX27-204ENST00000458013 DGUOKQ16854 277 aa19.92■□□□□ 0.78
SNX27-204ENST00000458013 PYDC2Q56P42 97 aa19.92■□□□□ 0.78
SNX27-204ENST00000458013 ZDHHC15Q96MV8 337 aa19.92■□□□□ 0.78
SNX27-204ENST00000458013 MBOAT7Q96N66 472 aa19.92■□□□□ 0.78
SNX27-204ENST00000458013 UGT2B28Q9BY64 529 aa19.92■□□□□ 0.78
SNX27-204ENST00000458013 FBXL21Q9UKT6 434 aa19.92■□□□□ 0.78
SNX27-204ENST00000458013 CLDN5O00501 218 aa19.92■□□□□ 0.78
SNX27-204ENST00000458013 TNFRSF21O75509 655 aa19.92■□□□□ 0.78
SNX27-204ENST00000458013 ZC3H12AQ5D1E8 599 aaKnown RBP19.92■□□□□ 0.78
SNX27-204ENST00000458013 PPM1LQ5SGD2 360 aa19.92■□□□□ 0.78
SNX27-204ENST00000458013 KCNK18Q7Z418 384 aa19.92■□□□□ 0.78
SNX27-204ENST00000458013 ELOA2Q8IYF1 753 aaPredicted RBP19.92■□□□□ 0.78
SNX27-204ENST00000458013 NLNQ9BYT8 704 aa19.92■□□□□ 0.78
SNX27-204ENST00000458013 CIDEBQ9UHD4 219 aa19.92■□□□□ 0.78
SNX27-204ENST00000458013 A0A0B4J269 797 aa19.92■□□□□ 0.78
SNX27-204ENST00000458013 PSMG1O95456 288 aa19.92■□□□□ 0.78
SNX27-204ENST00000458013 CCDC166P0CW27 439 aa19.92■□□□□ 0.78
SNX27-204ENST00000458013 RPS12P25398 132 aaKnown RBP19.92■□□□□ 0.78
SNX27-204ENST00000458013 MECRQ9BV79 373 aa19.92■□□□□ 0.78
SNX27-204ENST00000458013 AHSPQ9NZD4 102 aa19.92■□□□□ 0.78
SNX27-204ENST00000458013 IL1R1P14778 569 aa19.91■□□□□ 0.78
SNX27-204ENST00000458013 PRLRP16471 622 aa19.91■□□□□ 0.78
SNX27-204ENST00000458013 ITGA3P26006 1051 aa19.91■□□□□ 0.78
SNX27-204ENST00000458013 TNFSF9P41273 254 aa19.91■□□□□ 0.78
SNX27-204ENST00000458013 CASP5P51878 434 aa19.91■□□□□ 0.78
SNX27-204ENST00000458013 MCL1Q07820 350 aa19.91■□□□□ 0.78
SNX27-204ENST00000458013 MAD2L1Q13257 205 aaPredicted RBP19.91■□□□□ 0.78
SNX27-204ENST00000458013 MAP1SQ66K74 1059 aaPredicted RBP19.91■□□□□ 0.78
SNX27-204ENST00000458013 HIPK1Q86Z02 1210 aa19.91■□□□□ 0.78
SNX27-204ENST00000458013 ELL3Q9HB65 397 aaPredicted RBP19.91■□□□□ 0.78
SNX27-204ENST00000458013 TMX2Q9Y320 296 aa19.91■□□□□ 0.78
SNX27-204ENST00000458013 ZBTB14O43829 449 aa19.91■□□□□ 0.78
SNX27-204ENST00000458013 GJB1P08034 283 aa19.91■□□□□ 0.78
SNX27-204ENST00000458013 ME2P23368 584 aa19.91■□□□□ 0.78
SNX27-204ENST00000458013 MSX2P35548 267 aaPredicted RBP19.91■□□□□ 0.78
SNX27-204ENST00000458013 SEC23AQ15436 765 aa19.91■□□□□ 0.78
SNX27-204ENST00000458013 TM6SF2Q9BZW4 377 aa19.91■□□□□ 0.78
SNX27-204ENST00000458013 MAGEB16A2A368 324 aa19.91■□□□□ 0.78
SNX27-204ENST00000458013 LYPLA1O75608 230 aaPredicted RBP19.91■□□□□ 0.78
SNX27-204ENST00000458013 ELF3P78545 371 aaPredicted RBP19.91■□□□□ 0.78
SNX27-204ENST00000458013 WASHC2DQ5SRD0 308 aa19.91■□□□□ 0.78
SNX27-204ENST00000458013 FAM84AQ96KN4 292 aa19.91■□□□□ 0.78
SNX27-204ENST00000458013 POLR2EP19388 210 aaKnown RBP19.91■□□□□ 0.78
SNX27-204ENST00000458013 RENBPP51606 427 aa19.91■□□□□ 0.78
SNX27-204ENST00000458013 PRMT9Q6P2P2 845 aa19.91■□□□□ 0.78
SNX27-204ENST00000458013 NT5DC4Q86YG4 428 aa19.91■□□□□ 0.78
SNX27-204ENST00000458013 REPS2Q8NFH8 660 aa19.91■□□□□ 0.78
SNX27-204ENST00000458013 MCOLN3Q8TDD5 553 aa19.91■□□□□ 0.78
SNX27-204ENST00000458013 PLEKHG4BQ96PX9 1271 aa19.91■□□□□ 0.78
SNX27-204ENST00000458013 SPATA31D3P0C874 917 aa19.91■□□□□ 0.78
SNX27-204ENST00000458013 WSCD1Q658N2 575 aa19.91■□□□□ 0.78
SNX27-204ENST00000458013 SPATA31D4Q6ZUB0 917 aa19.91■□□□□ 0.78
SNX27-204ENST00000458013 OTOP1Q7RTM1 612 aa19.91■□□□□ 0.78
SNX27-204ENST00000458013 DUSP9Q99956 384 aaKnown RBP19.91■□□□□ 0.78
SNX27-204ENST00000458013 BTBD7Q9P203 1132 aa19.91■□□□□ 0.78
SNX27-204ENST00000458013 PNMA8CA0A1B0GUJ8 204 aa19.9■□□□□ 0.78
SNX27-204ENST00000458013 KHDRBS3O75525 346 aaKnown RBP19.9■□□□□ 0.78
SNX27-204ENST00000458013 TNFAIP8O95379 198 aa19.9■□□□□ 0.78
SNX27-204ENST00000458013 PGM3O95394 542 aa19.9■□□□□ 0.78
SNX27-204ENST00000458013 SHMT1P34896 483 aa19.9■□□□□ 0.78
SNX27-204ENST00000458013 DHRSXQ8N5I4 330 aa19.9■□□□□ 0.78
SNX27-204ENST00000458013 CYP3A43Q9HB55 503 aa19.9■□□□□ 0.78
SNX27-204ENST00000458013 MED26O95402 600 aa19.9■□□□□ 0.78
SNX27-204ENST00000458013 TP53INP1Q96A56 240 aa19.9■□□□□ 0.78
SNX27-204ENST00000458013 GANQ9H2C0 597 aa19.9■□□□□ 0.78
SNX27-204ENST00000458013 PNPLA6Q8IY17 1366 aa19.9■□□□□ 0.78
SNX27-204ENST00000458013 ANKDD1BA6NHY2 528 aa19.9■□□□□ 0.78
SNX27-204ENST00000458013 KPNA4O00629 521 aaPredicted RBP19.9■□□□□ 0.78
SNX27-204ENST00000458013 ADARP55265 1226 aaKnown RBP19.9■□□□□ 0.78
SNX27-204ENST00000458013 ARMC12Q5T9G4 340 aa19.9■□□□□ 0.78
SNX27-204ENST00000458013 PMM1Q92871 262 aa19.9■□□□□ 0.78
SNX27-204ENST00000458013 SLITRK2Q9H156 845 aa19.9■□□□□ 0.78
SNX27-204ENST00000458013 ADARB2Q9NS39 739 aaKnown RBP19.9■□□□□ 0.78
SNX27-204ENST00000458013 GRIN3BO60391 1043 aa19.9■□□□□ 0.78
SNX27-204ENST00000458013 C4BPBP20851 252 aa19.9■□□□□ 0.78
SNX27-204ENST00000458013 KDELR1P24390 212 aa19.9■□□□□ 0.78
SNX27-204ENST00000458013 PTPN3P26045 913 aa19.9■□□□□ 0.78
SNX27-204ENST00000458013 PPP4CP60510 307 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms