RNA–Protein interactions for RNA: ENST00000456953.5

SNHG17-208, Transcript of small nucleolar RNA host gene 17, human

TSL 3 BASIC

Gene SNHG17, Length 546 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG17-208	ENST00000456953	VDR	P11473	427 aa		13.53	□□□□□ -0.24
SNHG17-208	ENST00000456953	RPL13	P26373	211 aa	Known RBP	13.53	□□□□□ -0.24
SNHG17-208	ENST00000456953	MXI1	P50539	228 aa		13.53	□□□□□ -0.24
SNHG17-208	ENST00000456953	PLK1	P53350	603 aa		13.53	□□□□□ -0.24
SNHG17-208	ENST00000456953	MCCD1	P59942	119 aa	Predicted RBP	13.53	□□□□□ -0.24
SNHG17-208	ENST00000456953	CCDC15	Q0P6D6	951 aa		13.53	□□□□□ -0.24
SNHG17-208	ENST00000456953	DPYD	Q12882	1025 aa		13.53	□□□□□ -0.24
SNHG17-208	ENST00000456953	PIP5KL1	Q5T9C9	394 aa		13.53	□□□□□ -0.24
SNHG17-208	ENST00000456953	GUSBP11	Q6P575	273 aa		13.53	□□□□□ -0.24
SNHG17-208	ENST00000456953	FOXR1	Q6PIV2	292 aa		13.53	□□□□□ -0.24
SNHG17-208	ENST00000456953	USP53	Q70EK8	1073 aa		13.53	□□□□□ -0.24
SNHG17-208	ENST00000456953	EFL1	Q7Z2Z2	1120 aa	Known RBP	13.53	□□□□□ -0.24
SNHG17-208	ENST00000456953	HORMAD1	Q86X24	394 aa		13.53	□□□□□ -0.24
SNHG17-208	ENST00000456953	ZNF548	Q8NEK5	533 aa	Predicted RBP	13.53	□□□□□ -0.24
SNHG17-208	ENST00000456953	DQX1	Q8TE96	717 aa	Known RBP	13.53	□□□□□ -0.24
SNHG17-208	ENST00000456953	KLK6	Q92876	244 aa		13.53	□□□□□ -0.24
SNHG17-208	ENST00000456953	ERCC4	Q92889	916 aa	Predicted RBP	13.53	□□□□□ -0.24
SNHG17-208	ENST00000456953	ARRDC3	Q96B67	414 aa		13.53	□□□□□ -0.24
SNHG17-208	ENST00000456953	SGF29	Q96ES7	293 aa		13.53	□□□□□ -0.24
SNHG17-208	ENST00000456953	SLC39A13	Q96H72	371 aa		13.53	□□□□□ -0.24
SNHG17-208	ENST00000456953	CAAP1	Q9H8G2	361 aa		13.53	□□□□□ -0.24
SNHG17-208	ENST00000456953	FZD3	Q9NPG1	666 aa		13.53	□□□□□ -0.24
SNHG17-208	ENST00000456953	RMND1	Q9NWS8	449 aa		13.53	□□□□□ -0.24
SNHG17-208	ENST00000456953	ANKMY1	Q9P2S6	941 aa		13.53	□□□□□ -0.24
SNHG17-208	ENST00000456953	CSNK1G3	Q9Y6M4	447 aa		13.53	□□□□□ -0.24
SNHG17-208	ENST00000456953	KIF26B	Q2KJY2	2108 aa		13.52	□□□□□ -0.24
SNHG17-208	ENST00000456953	CCDC187	A0A096LP49	1063 aa		13.52	□□□□□ -0.25
SNHG17-208	ENST00000456953	EME2	A4GXA9	379 aa	Predicted RBP	13.52	□□□□□ -0.25
SNHG17-208	ENST00000456953		A6NNZ2	444 aa		13.52	□□□□□ -0.25
SNHG17-208	ENST00000456953	FBXO21	O94952	628 aa		13.52	□□□□□ -0.25
SNHG17-208	ENST00000456953	APOE	P02649	317 aa		13.52	□□□□□ -0.25
SNHG17-208	ENST00000456953	PDGFRA	P16234	1089 aa		13.52	□□□□□ -0.25
SNHG17-208	ENST00000456953	ZNF18	P17022	549 aa		13.52	□□□□□ -0.25
SNHG17-208	ENST00000456953	ITGB6	P18564	788 aa		13.52	□□□□□ -0.25
SNHG17-208	ENST00000456953	RGS7	P49802	495 aa		13.52	□□□□□ -0.25
SNHG17-208	ENST00000456953	OXCT1	P55809	520 aa		13.52	□□□□□ -0.25
SNHG17-208	ENST00000456953	CLDN2	P57739	230 aa		13.52	□□□□□ -0.25
SNHG17-208	ENST00000456953	YWHAE	P62258	255 aa	Known RBP	13.52	□□□□□ -0.25
SNHG17-208	ENST00000456953	NFKB2	Q00653	900 aa		13.52	□□□□□ -0.25
SNHG17-208	ENST00000456953	ACCSL	Q4AC99	568 aa		13.52	□□□□□ -0.25
SNHG17-208	ENST00000456953	ZNF542P	Q5EBM4	170 aa		13.52	□□□□□ -0.25
SNHG17-208	ENST00000456953	PMF1	Q6P1K2	205 aa		13.52	□□□□□ -0.25
SNHG17-208	ENST00000456953	LCLAT1	Q6UWP7	414 aa		13.52	□□□□□ -0.25
SNHG17-208	ENST00000456953	GCNT7	Q6ZNI0	430 aa		13.52	□□□□□ -0.25
SNHG17-208	ENST00000456953		Q6ZSR6	202 aa		13.52	□□□□□ -0.25
SNHG17-208	ENST00000456953	CHSY1	Q86X52	802 aa		13.52	□□□□□ -0.25
SNHG17-208	ENST00000456953	WDR48	Q8TAF3	677 aa		13.52	□□□□□ -0.25
SNHG17-208	ENST00000456953	SLC35F5	Q8WV83	523 aa		13.52	□□□□□ -0.25
SNHG17-208	ENST00000456953	EXTL1	Q92935	676 aa		13.52	□□□□□ -0.25
SNHG17-208	ENST00000456953	EEF2KMT	Q96G04	330 aa		13.52	□□□□□ -0.25
SNHG17-208	ENST00000456953	NOX5	Q96PH1	765 aa		13.52	□□□□□ -0.25
SNHG17-208	ENST00000456953	PPP1R9B	Q96SB3	815 aa		13.52	□□□□□ -0.25
SNHG17-208	ENST00000456953	SEMA3C	Q99985	751 aa		13.52	□□□□□ -0.25
SNHG17-208	ENST00000456953	GPR27	Q9NS67	375 aa		13.52	□□□□□ -0.25
SNHG17-208	ENST00000456953	SALL4	Q9UJQ4	1053 aa		13.52	□□□□□ -0.25
SNHG17-208	ENST00000456953	NBPF19	A0A087WUL8	3843 aa		13.51	□□□□□ -0.25
SNHG17-208	ENST00000456953		H3BM21	787 aa		13.51	□□□□□ -0.25
SNHG17-208	ENST00000456953	PIK3R2	O00459	728 aa		13.51	□□□□□ -0.25
SNHG17-208	ENST00000456953	STX10	O60499	249 aa		13.51	□□□□□ -0.25
SNHG17-208	ENST00000456953	CSF2	P04141	144 aa		13.51	□□□□□ -0.25
SNHG17-208	ENST00000456953	FYN	P06241	537 aa		13.51	□□□□□ -0.25
SNHG17-208	ENST00000456953	GP1BB	P13224	206 aa		13.51	□□□□□ -0.25
SNHG17-208	ENST00000456953	NME1	P15531	152 aa	Known RBP	13.51	□□□□□ -0.25
SNHG17-208	ENST00000456953	TACR2	P21452	398 aa		13.51	□□□□□ -0.25
SNHG17-208	ENST00000456953	NUMB	P49757	651 aa		13.51	□□□□□ -0.25
SNHG17-208	ENST00000456953	CUL2	Q13617	745 aa		13.51	□□□□□ -0.25
SNHG17-208	ENST00000456953	FZD2	Q14332	565 aa		13.51	□□□□□ -0.25
SNHG17-208	ENST00000456953	NR0B2	Q15466	257 aa		13.51	□□□□□ -0.25
SNHG17-208	ENST00000456953	DLG2	Q15700	870 aa		13.51	□□□□□ -0.25
SNHG17-208	ENST00000456953	TTC39B	Q5VTQ0	682 aa	Predicted RBP	13.51	□□□□□ -0.25
SNHG17-208	ENST00000456953	RAP1GAP2	Q684P5	730 aa		13.51	□□□□□ -0.25
SNHG17-208	ENST00000456953		Q6ZVU0	165 aa		13.51	□□□□□ -0.25
SNHG17-208	ENST00000456953	PTAR1	Q7Z6K3	402 aa	Predicted RBP	13.51	□□□□□ -0.25
SNHG17-208	ENST00000456953	CLEC4C	Q8WTT0	213 aa		13.51	□□□□□ -0.25
SNHG17-208	ENST00000456953	BTN2A3P	Q96KV6	586 aa		13.51	□□□□□ -0.25
SNHG17-208	ENST00000456953	GSDMA	Q96QA5	445 aa		13.51	□□□□□ -0.25
SNHG17-208	ENST00000456953	TMEM63C	Q9P1W3	806 aa		13.51	□□□□□ -0.25
SNHG17-208	ENST00000456953	KIAA1468	Q9P260	1216 aa		13.51	□□□□□ -0.25
SNHG17-208	ENST00000456953	SEPT3	Q9UH03	358 aa		13.51	□□□□□ -0.25
SNHG17-208	ENST00000456953	XPO7	Q9UIA9	1087 aa	Known RBP	13.51	□□□□□ -0.25
SNHG17-208	ENST00000456953	SLC25A13	Q9UJS0	675 aa		13.51	□□□□□ -0.25
SNHG17-208	ENST00000456953	PCDHGA7	Q9Y5G6	932 aa		13.51	□□□□□ -0.25
SNHG17-208	ENST00000456953	NBAS	A2RRP1	2371 aa		13.51	□□□□□ -0.25
SNHG17-208	ENST00000456953	RP1	P56715	2156 aa		13.51	□□□□□ -0.25
SNHG17-208	ENST00000456953	SPTY2D1-AS1	A0A0U1RR47	76 aa		13.5	□□□□□ -0.25
SNHG17-208	ENST00000456953	TCAF2	A6NFQ2	919 aa		13.5	□□□□□ -0.25
SNHG17-208	ENST00000456953		F5H5T6	163 aa		13.5	□□□□□ -0.25
SNHG17-208	ENST00000456953	TPP1	O14773	563 aa		13.5	□□□□□ -0.25
SNHG17-208	ENST00000456953	AQP9	O43315	295 aa		13.5	□□□□□ -0.25
SNHG17-208	ENST00000456953	FAM87A	P0C7U9	286 aa		13.5	□□□□□ -0.25
SNHG17-208	ENST00000456953	RPIA	P49247	311 aa		13.5	□□□□□ -0.25
SNHG17-208	ENST00000456953	PDX1	P52945	283 aa		13.5	□□□□□ -0.25
SNHG17-208	ENST00000456953	ADAM9	Q13443	819 aa		13.5	□□□□□ -0.25
SNHG17-208	ENST00000456953	KYAT3	Q6YP21	454 aa	Known RBP	13.5	□□□□□ -0.25
SNHG17-208	ENST00000456953	TAC4	Q86UU9	113 aa		13.5	□□□□□ -0.25
SNHG17-208	ENST00000456953	PARG	Q86W56	976 aa		13.5	□□□□□ -0.25
SNHG17-208	ENST00000456953	CCAR2	Q8N163	923 aa	Known RBP	13.5	□□□□□ -0.25
SNHG17-208	ENST00000456953	NAT6	Q93015	286 aa		13.5	□□□□□ -0.25
SNHG17-208	ENST00000456953	LIN37	Q96GY3	246 aa	Predicted RBP	13.5	□□□□□ -0.25
SNHG17-208	ENST00000456953	HSFY1	Q96LI6	401 aa		13.5	□□□□□ -0.25

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