RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 GALK2Q01415 458 aa4.63□□□□□ -1.67
DEPDC1-202ENST00000456315 LAYNQ6UX15 382 aa4.63□□□□□ -1.67
DEPDC1-202ENST00000456315 BBS12Q6ZW61 710 aa4.63□□□□□ -1.67
DEPDC1-202ENST00000456315 ABI3BPQ7Z7G0 1075 aa4.63□□□□□ -1.67
DEPDC1-202ENST00000456315 NLRP8Q86W28 1048 aa4.63□□□□□ -1.67
DEPDC1-202ENST00000456315 CMTR2Q8IYT2 770 aaKnown RBP4.63□□□□□ -1.67
DEPDC1-202ENST00000456315 PGBD5Q8N414 524 aa4.63□□□□□ -1.67
DEPDC1-202ENST00000456315 NME8Q8N427 588 aa4.63□□□□□ -1.67
DEPDC1-202ENST00000456315 TMCO5AQ8N6Q1 288 aa4.63□□□□□ -1.67
DEPDC1-202ENST00000456315 OR13F1Q8NGS4 319 aa4.63□□□□□ -1.67
DEPDC1-202ENST00000456315 PCDH19Q8TAB3 1148 aa4.63□□□□□ -1.67
DEPDC1-202ENST00000456315 SLC22A17Q8WUG5 538 aa4.63□□□□□ -1.67
DEPDC1-202ENST00000456315 PDCD6IPQ8WUM4 868 aaKnown RBP4.63□□□□□ -1.67
DEPDC1-202ENST00000456315 HPS1Q92902 700 aa4.63□□□□□ -1.67
DEPDC1-202ENST00000456315 ANKRD60Q9BZ19 345 aa4.63□□□□□ -1.67
DEPDC1-202ENST00000456315 GCOM2Q9BZD3 368 aaPredicted RBP4.63□□□□□ -1.67
DEPDC1-202ENST00000456315 WDR11Q9BZH6 1224 aa4.63□□□□□ -1.67
DEPDC1-202ENST00000456315 TBCCD1Q9NVR7 557 aa4.63□□□□□ -1.67
DEPDC1-202ENST00000456315 XPO7Q9UIA9 1087 aaKnown RBP4.63□□□□□ -1.67
DEPDC1-202ENST00000456315 NME7Q9Y5B8 376 aa4.63□□□□□ -1.67
DEPDC1-202ENST00000456315 BRCA1P38398 1863 aaKnown RBP4.63□□□□□ -1.67
DEPDC1-202ENST00000456315 CACNA1GO43497 2377 aa4.63□□□□□ -1.67
DEPDC1-202ENST00000456315 COL11A2P13942 1736 aaPredicted RBP4.63□□□□□ -1.67
DEPDC1-202ENST00000456315 GPR25O00155 361 aa4.63□□□□□ -1.67
DEPDC1-202ENST00000456315 BCAS2O75934 225 aaPredicted RBP4.63□□□□□ -1.67
DEPDC1-202ENST00000456315 ENDOD1O94919 500 aa4.63□□□□□ -1.67
DEPDC1-202ENST00000456315 STARD3NLO95772 234 aa4.63□□□□□ -1.67
DEPDC1-202ENST00000456315 NDUFB10O96000 172 aa4.63□□□□□ -1.67
DEPDC1-202ENST00000456315 SETSIPP0DME0 302 aa4.63□□□□□ -1.67
DEPDC1-202ENST00000456315 BMP4P12644 408 aa4.63□□□□□ -1.67
DEPDC1-202ENST00000456315 ICAM2P13598 275 aa4.63□□□□□ -1.67
DEPDC1-202ENST00000456315 NCF2P19878 526 aaPredicted RBP4.63□□□□□ -1.67
DEPDC1-202ENST00000456315 AGXTP21549 392 aa4.63□□□□□ -1.67
DEPDC1-202ENST00000456315 TMED10P49755 219 aaKnown RBP4.63□□□□□ -1.67
DEPDC1-202ENST00000456315 CLK3P49761 638 aaKnown RBP4.63□□□□□ -1.67
DEPDC1-202ENST00000456315 GPC3P51654 580 aa4.63□□□□□ -1.67
DEPDC1-202ENST00000456315 AP3M2P53677 418 aa4.63□□□□□ -1.67
DEPDC1-202ENST00000456315 MVKQ03426 396 aa4.63□□□□□ -1.67
DEPDC1-202ENST00000456315 ZNF460Q14592 562 aa4.63□□□□□ -1.67
DEPDC1-202ENST00000456315 NKG7Q16617 165 aa4.63□□□□□ -1.67
DEPDC1-202ENST00000456315 ADPRMQ3LIE5 342 aa4.63□□□□□ -1.67
DEPDC1-202ENST00000456315 CCDC62Q6P9F0 684 aa4.63□□□□□ -1.67
DEPDC1-202ENST00000456315 RHOT1Q8IXI2 618 aa4.63□□□□□ -1.67
DEPDC1-202ENST00000456315 XXYLT1Q8NBI6 393 aa4.63□□□□□ -1.67
DEPDC1-202ENST00000456315 MORC4Q8TE76 937 aa4.63□□□□□ -1.67
DEPDC1-202ENST00000456315 FCRL3Q96P31 734 aaPredicted RBP4.63□□□□□ -1.67
DEPDC1-202ENST00000456315 CGREF1Q99674 301 aa4.63□□□□□ -1.67
DEPDC1-202ENST00000456315 LXNQ9BS40 222 aa4.63□□□□□ -1.67
DEPDC1-202ENST00000456315 FRMD8Q9BZ67 464 aaPredicted RBP4.63□□□□□ -1.67
DEPDC1-202ENST00000456315 TNKS2Q9H2K2 1166 aa4.63□□□□□ -1.67
DEPDC1-202ENST00000456315 RNF167Q9H6Y7 350 aa4.63□□□□□ -1.67
DEPDC1-202ENST00000456315 PLEKHA5Q9HAU0 1116 aa4.63□□□□□ -1.67
DEPDC1-202ENST00000456315 KLHL3Q9UH77 587 aa4.63□□□□□ -1.67
DEPDC1-202ENST00000456315 ANGPTL2Q9UKU9 493 aa4.63□□□□□ -1.67
DEPDC1-202ENST00000456315 SPTA1P02549 2419 aa4.63□□□□□ -1.67
DEPDC1-202ENST00000456315 TNRC18O15417 2968 aaPredicted RBP4.62□□□□□ -1.67
DEPDC1-202ENST00000456315 PEX10O60683 326 aa4.62□□□□□ -1.67
DEPDC1-202ENST00000456315 ITGAVP06756 1048 aa4.62□□□□□ -1.67
DEPDC1-202ENST00000456315 GRK5P34947 590 aa4.62□□□□□ -1.67
DEPDC1-202ENST00000456315 LSM3P62310 102 aaKnown RBP4.62□□□□□ -1.67
DEPDC1-202ENST00000456315 IHHQ14623 411 aa4.62□□□□□ -1.67
DEPDC1-202ENST00000456315 CRY1Q16526 586 aa4.62□□□□□ -1.67
DEPDC1-202ENST00000456315 MAP3K21Q5TCX8 1036 aa4.62□□□□□ -1.67
DEPDC1-202ENST00000456315 TMEM270Q6UE05 265 aa4.62□□□□□ -1.67
DEPDC1-202ENST00000456315 SLC26A11Q86WA9 606 aa4.62□□□□□ -1.67
DEPDC1-202ENST00000456315 TMEM192Q8IY95 271 aa4.62□□□□□ -1.67
DEPDC1-202ENST00000456315 OR4M1Q8NGD0 313 aa4.62□□□□□ -1.67
DEPDC1-202ENST00000456315 SLC7A14Q8TBB6 771 aa4.62□□□□□ -1.67
DEPDC1-202ENST00000456315 SH3YL1Q96HL8 342 aaPredicted RBP4.62□□□□□ -1.67
DEPDC1-202ENST00000456315 MUS81Q96NY9 551 aa4.62□□□□□ -1.67
DEPDC1-202ENST00000456315 OMDQ99983 421 aa4.62□□□□□ -1.67
DEPDC1-202ENST00000456315 OSBPL2Q9H1P3 480 aa4.62□□□□□ -1.67
DEPDC1-202ENST00000456315 HIPK3Q9H422 1215 aa4.62□□□□□ -1.67
DEPDC1-202ENST00000456315 RNF19AQ9NV58 838 aa4.62□□□□□ -1.67
DEPDC1-202ENST00000456315 ZC3H7BQ9UGR2 993 aaKnown RBP4.62□□□□□ -1.67
DEPDC1-202ENST00000456315 DNMT3AQ9Y6K1 912 aaPredicted RBP4.62□□□□□ -1.67
DEPDC1-202ENST00000456315 ABCA1O95477 2261 aa4.62□□□□□ -1.67
DEPDC1-202ENST00000456315 CCDC162PA2VCL2 907 aa4.62□□□□□ -1.67
DEPDC1-202ENST00000456315 A8MV72 311 aaPredicted RBP4.62□□□□□ -1.67
DEPDC1-202ENST00000456315 PSMD11O00231 422 aa4.62□□□□□ -1.67
DEPDC1-202ENST00000456315 SCO2O43819 266 aa4.62□□□□□ -1.67
DEPDC1-202ENST00000456315 B4GALT4O60513 344 aa4.62□□□□□ -1.67
DEPDC1-202ENST00000456315 MYO1DO94832 1006 aa4.62□□□□□ -1.67
DEPDC1-202ENST00000456315 ABCB1P08183 1280 aaPredicted RBP4.62□□□□□ -1.67
DEPDC1-202ENST00000456315 TSPAN8P19075 237 aa4.62□□□□□ -1.67
DEPDC1-202ENST00000456315 GRK2P25098 689 aa4.62□□□□□ -1.67
DEPDC1-202ENST00000456315 FMO4P31512 558 aa4.62□□□□□ -1.67
DEPDC1-202ENST00000456315 RHDQ02161 417 aa4.62□□□□□ -1.67
DEPDC1-202ENST00000456315 TRAF2Q12933 501 aa4.62□□□□□ -1.67
DEPDC1-202ENST00000456315 BFSP2Q13515 415 aa4.62□□□□□ -1.67
DEPDC1-202ENST00000456315 BAATQ14032 418 aaPredicted RBP4.62□□□□□ -1.67
DEPDC1-202ENST00000456315 MAPK11Q15759 364 aa4.62□□□□□ -1.67
DEPDC1-202ENST00000456315 KLHL17Q6TDP4 642 aa4.62□□□□□ -1.67
DEPDC1-202ENST00000456315 NT5DC4Q86YG4 428 aa4.62□□□□□ -1.67
DEPDC1-202ENST00000456315 SIX5Q8N196 739 aa4.62□□□□□ -1.67
DEPDC1-202ENST00000456315 MFSD3Q96ES6 412 aa4.62□□□□□ -1.67
DEPDC1-202ENST00000456315 VPS50Q96JG6 964 aa4.62□□□□□ -1.67
DEPDC1-202ENST00000456315 LHPPQ9H008 270 aa4.62□□□□□ -1.67
DEPDC1-202ENST00000456315 STMN4Q9H169 189 aaPredicted RBP4.62□□□□□ -1.67
DEPDC1-202ENST00000456315 PLGRKTQ9HBL7 147 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms