RNA–Protein interactions for RNA: ENST00000454591.6

ECHDC1-209, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,515 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-209ENST00000454591 VCXQ9H320 206 aa12.74□□□□□ -0.37
ECHDC1-209ENST00000454591 ZNF385DQ9H6B1 395 aa12.74□□□□□ -0.37
ECHDC1-209ENST00000454591 S100A14Q9HCY8 104 aa12.74□□□□□ -0.37
ECHDC1-209ENST00000454591 VTI1BQ9UEU0 232 aa12.74□□□□□ -0.37
ECHDC1-209ENST00000454591 DSEQ9UL01 958 aa12.74□□□□□ -0.37
ECHDC1-209ENST00000454591 SSX2IPQ9Y2D8 614 aa12.74□□□□□ -0.37
ECHDC1-209ENST00000454591 SRCAPQ6ZRS2 3230 aa12.74□□□□□ -0.37
ECHDC1-209ENST00000454591 PLXNA3P51805 1871 aa12.74□□□□□ -0.37
ECHDC1-209ENST00000454591 SYNJ2BP-COX16A0A087WUM0 186 aa12.73□□□□□ -0.37
ECHDC1-209ENST00000454591 WASH4PA8MWX3 477 aa12.73□□□□□ -0.37
ECHDC1-209ENST00000454591 F5H423 210 aaPredicted RBP12.73□□□□□ -0.37
ECHDC1-209ENST00000454591 INPPL1O15357 1258 aa12.73□□□□□ -0.37
ECHDC1-209ENST00000454591 IRAK2O43187 625 aa12.73□□□□□ -0.37
ECHDC1-209ENST00000454591 LINGO3P0C6S8 592 aa12.73□□□□□ -0.37
ECHDC1-209ENST00000454591 ADRA1AP35348 466 aa12.73□□□□□ -0.37
ECHDC1-209ENST00000454591 SERPINB5P36952 375 aa12.73□□□□□ -0.37
ECHDC1-209ENST00000454591 RAB27AP51159 221 aa12.73□□□□□ -0.37
ECHDC1-209ENST00000454591 CLCNKBP51801 687 aa12.73□□□□□ -0.37
ECHDC1-209ENST00000454591 GEMP55040 296 aa12.73□□□□□ -0.37
ECHDC1-209ENST00000454591 MGAT3Q09327 533 aa12.73□□□□□ -0.37
ECHDC1-209ENST00000454591 ASPHQ12797 758 aa12.73□□□□□ -0.37
ECHDC1-209ENST00000454591 KLF10Q13118 480 aa12.73□□□□□ -0.37
ECHDC1-209ENST00000454591 MAPRE1Q15691 268 aaKnown RBP12.73□□□□□ -0.37
ECHDC1-209ENST00000454591 FSCN1Q16658 493 aaKnown RBP12.73□□□□□ -0.37
ECHDC1-209ENST00000454591 C1orf146Q5VVC0 180 aa12.73□□□□□ -0.37
ECHDC1-209ENST00000454591 DENND5AQ6IQ26 1287 aa12.73□□□□□ -0.37
ECHDC1-209ENST00000454591 PKN3Q6P5Z2 889 aa12.73□□□□□ -0.37
ECHDC1-209ENST00000454591 AGMOQ6ZNB7 445 aa12.73□□□□□ -0.37
ECHDC1-209ENST00000454591 SETD3Q86TU7 594 aaPredicted RBP12.73□□□□□ -0.37
ECHDC1-209ENST00000454591 RSPH3Q86UC2 560 aa12.73□□□□□ -0.37
ECHDC1-209ENST00000454591 TAC4Q86UU9 113 aa12.73□□□□□ -0.37
ECHDC1-209ENST00000454591 C3orf58Q8NDZ4 430 aa12.73□□□□□ -0.37
ECHDC1-209ENST00000454591 MICAL1Q8TDZ2 1067 aa12.73□□□□□ -0.37
ECHDC1-209ENST00000454591 DQX1Q8TE96 717 aaKnown RBP12.73□□□□□ -0.37
ECHDC1-209ENST00000454591 MYLPFQ96A32 169 aa12.73□□□□□ -0.37
ECHDC1-209ENST00000454591 IFT43Q96FT9 208 aa12.73□□□□□ -0.37
ECHDC1-209ENST00000454591 AGAP3Q96P47 875 aa12.73□□□□□ -0.37
ECHDC1-209ENST00000454591 AGAP2Q99490 1192 aa12.73□□□□□ -0.37
ECHDC1-209ENST00000454591 GATA5Q9BWX5 397 aaPredicted RBP12.73□□□□□ -0.37
ECHDC1-209ENST00000454591 SENP6Q9GZR1 1112 aaPredicted RBP12.73□□□□□ -0.37
ECHDC1-209ENST00000454591 ILKAPQ9H0C8 392 aaPredicted RBP12.73□□□□□ -0.37
ECHDC1-209ENST00000454591 COG4Q9H9E3 785 aa12.73□□□□□ -0.37
ECHDC1-209ENST00000454591 DMAP1Q9NPF5 467 aaPredicted RBP12.73□□□□□ -0.37
ECHDC1-209ENST00000454591 C20orf96Q9NUD7 363 aaPredicted RBP12.73□□□□□ -0.37
ECHDC1-209ENST00000454591 ZNF358Q9NW07 568 aa12.73□□□□□ -0.37
ECHDC1-209ENST00000454591 PIH1D1Q9NWS0 290 aaKnown RBP12.73□□□□□ -0.37
ECHDC1-209ENST00000454591 MIOSQ9NXC5 875 aa12.73□□□□□ -0.37
ECHDC1-209ENST00000454591 NDE1Q9NXR1 346 aa12.73□□□□□ -0.37
ECHDC1-209ENST00000454591 COX16Q9P0S2 106 aa12.73□□□□□ -0.37
ECHDC1-209ENST00000454591 PRPF19Q9UMS4 504 aaKnown RBP12.73□□□□□ -0.37
ECHDC1-209ENST00000454591 WASF2Q9Y6W5 498 aa12.73□□□□□ -0.37
ECHDC1-209ENST00000454591 TDRD15B5MCY1 1934 aaKnown RBP12.73□□□□□ -0.37
ECHDC1-209ENST00000454591 NUP205Q92621 2012 aa12.73□□□□□ -0.37
ECHDC1-209ENST00000454591 ARHGEF37A1IGU5 675 aa12.72□□□□□ -0.37
ECHDC1-209ENST00000454591 MAGEA13PA6NCF6 341 aa12.72□□□□□ -0.37
ECHDC1-209ENST00000454591 ARL5CA6NH57 179 aa12.72□□□□□ -0.37
ECHDC1-209ENST00000454591 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.72□□□□□ -0.37
ECHDC1-209ENST00000454591 CASQ2O14958 399 aaPredicted RBP12.72□□□□□ -0.37
ECHDC1-209ENST00000454591 MATN3O15232 486 aa12.72□□□□□ -0.37
ECHDC1-209ENST00000454591 HDAC3O15379 428 aa12.72□□□□□ -0.37
ECHDC1-209ENST00000454591 USP12O75317 370 aa12.72□□□□□ -0.37
ECHDC1-209ENST00000454591 DUSP11O75319 330 aaKnown RBP12.72□□□□□ -0.37
ECHDC1-209ENST00000454591 HSPA4LO95757 839 aa12.72□□□□□ -0.37
ECHDC1-209ENST00000454591 SBK3P0C264 359 aa12.72□□□□□ -0.37
ECHDC1-209ENST00000454591 COX4I1P13073 169 aa12.72□□□□□ -0.37
ECHDC1-209ENST00000454591 ITGAXP20702 1163 aa12.72□□□□□ -0.37
ECHDC1-209ENST00000454591 IGFBP6P24592 240 aaPredicted RBP12.72□□□□□ -0.37
ECHDC1-209ENST00000454591 NMBRP28336 390 aa12.72□□□□□ -0.37
ECHDC1-209ENST00000454591 MTTPP55157 894 aa12.72□□□□□ -0.37
ECHDC1-209ENST00000454591 MXRA7P84157 204 aa12.72□□□□□ -0.37
ECHDC1-209ENST00000454591 PRKAA1Q13131 559 aa12.72□□□□□ -0.37
ECHDC1-209ENST00000454591 OLIG2Q13516 323 aa12.72□□□□□ -0.37
ECHDC1-209ENST00000454591 SLC12A1Q13621 1099 aa12.72□□□□□ -0.37
ECHDC1-209ENST00000454591 PPP2R5DQ14738 602 aa12.72□□□□□ -0.37
ECHDC1-209ENST00000454591 TRIM68Q6AZZ1 485 aa12.72□□□□□ -0.37
ECHDC1-209ENST00000454591 NAPRTQ6XQN6 538 aa12.72□□□□□ -0.37
ECHDC1-209ENST00000454591 GALNT7Q86SF2 657 aa12.72□□□□□ -0.37
ECHDC1-209ENST00000454591 KBTBD2Q8IY47 623 aa12.72□□□□□ -0.37
ECHDC1-209ENST00000454591 NETO2Q8NC67 525 aa12.72□□□□□ -0.37
ECHDC1-209ENST00000454591 CLPTM1LQ96KA5 538 aa12.72□□□□□ -0.37
ECHDC1-209ENST00000454591 UROC1Q96N76 676 aa12.72□□□□□ -0.37
ECHDC1-209ENST00000454591 GAD1Q99259 594 aa12.72□□□□□ -0.37
ECHDC1-209ENST00000454591 APBA2Q99767 749 aa12.72□□□□□ -0.37
ECHDC1-209ENST00000454591 TBL1YQ9BQ87 522 aa12.72□□□□□ -0.37
ECHDC1-209ENST00000454591 FAM167BQ9BTA0 163 aa12.72□□□□□ -0.37
ECHDC1-209ENST00000454591 ACE2Q9BYF1 805 aaPredicted RBP12.72□□□□□ -0.37
ECHDC1-209ENST00000454591 UPF3AQ9H1J1 476 aaKnown RBP12.72□□□□□ -0.37
ECHDC1-209ENST00000454591 VCX3BQ9H321 246 aa12.72□□□□□ -0.37
ECHDC1-209ENST00000454591 ARNT2Q9HBZ2 717 aa12.72□□□□□ -0.37
ECHDC1-209ENST00000454591 GLOD4Q9HC38 313 aa12.72□□□□□ -0.37
ECHDC1-209ENST00000454591 ENTPD7Q9NQZ7 604 aa12.72□□□□□ -0.37
ECHDC1-209ENST00000454591 CHRAC1Q9NRG0 131 aa12.72□□□□□ -0.37
ECHDC1-209ENST00000454591 MRGBPQ9NV56 204 aa12.72□□□□□ -0.37
ECHDC1-209ENST00000454591 OSER1Q9NX31 292 aa12.72□□□□□ -0.37
ECHDC1-209ENST00000454591 CDH22Q9UJ99 828 aa12.72□□□□□ -0.37
ECHDC1-209ENST00000454591 ARHGAP26Q9UNA1 814 aa12.72□□□□□ -0.37
ECHDC1-209ENST00000454591 ST3GAL5Q9UNP4 418 aa12.72□□□□□ -0.37
ECHDC1-209ENST00000454591 ASB3Q9Y575 518 aa12.72□□□□□ -0.37
ECHDC1-209ENST00000454591 MYLKQ15746 1914 aa12.72□□□□□ -0.37
ECHDC1-209ENST00000454591 DPPA5A6NC42 116 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms