RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 ATL3Q6DD88 541 aa6.15□□□□□ -1.42
HLA-DPA3-207ENST00000454398 TTI2Q6NXR4 508 aa6.15□□□□□ -1.42
HLA-DPA3-207ENST00000454398 C22orf39Q6P5X5 142 aa6.15□□□□□ -1.42
HLA-DPA3-207ENST00000454398 LEKR1Q6ZMV7 388 aa6.15□□□□□ -1.42
HLA-DPA3-207ENST00000454398 TRIM69Q86WT6 500 aa6.15□□□□□ -1.42
HLA-DPA3-207ENST00000454398 FMR1NBQ8N0W7 255 aaPredicted RBP6.15□□□□□ -1.42
HLA-DPA3-207ENST00000454398 DEFB106AQ8N104 65 aa6.15□□□□□ -1.42
HLA-DPA3-207ENST00000454398 SCML4Q8N228 414 aa6.15□□□□□ -1.42
HLA-DPA3-207ENST00000454398 FAM181AQ8N9Y4 354 aa6.15□□□□□ -1.42
HLA-DPA3-207ENST00000454398 MFSD2AQ8NA29 543 aa6.15□□□□□ -1.42
HLA-DPA3-207ENST00000454398 NETO2Q8NC67 525 aa6.15□□□□□ -1.42
HLA-DPA3-207ENST00000454398 ZNF548Q8NEK5 533 aaPredicted RBP6.15□□□□□ -1.42
HLA-DPA3-207ENST00000454398 OR7D4Q8NG98 312 aa6.15□□□□□ -1.42
HLA-DPA3-207ENST00000454398 OR4C6Q8NH72 309 aa6.15□□□□□ -1.42
HLA-DPA3-207ENST00000454398 RNF34Q969K3 372 aa6.15□□□□□ -1.42
HLA-DPA3-207ENST00000454398 SKA1Q96BD8 255 aa6.15□□□□□ -1.42
HLA-DPA3-207ENST00000454398 ALG14Q96F25 216 aa6.15□□□□□ -1.42
HLA-DPA3-207ENST00000454398 ATXN7L3BQ96GX2 97 aa6.15□□□□□ -1.42
HLA-DPA3-207ENST00000454398 HIC2Q96JB3 615 aa6.15□□□□□ -1.42
HLA-DPA3-207ENST00000454398 BTN2A3PQ96KV6 586 aa6.15□□□□□ -1.42
HLA-DPA3-207ENST00000454398 APOLD1Q96LR9 279 aa6.15□□□□□ -1.42
HLA-DPA3-207ENST00000454398 PSMB7Q99436 277 aa6.15□□□□□ -1.42
HLA-DPA3-207ENST00000454398 DDX50Q9BQ39 737 aaKnown RBP6.15□□□□□ -1.42
HLA-DPA3-207ENST00000454398 CRACR2AQ9BSW2 395 aa6.15□□□□□ -1.42
HLA-DPA3-207ENST00000454398 NRSN2Q9GZP1 204 aa6.15□□□□□ -1.42
HLA-DPA3-207ENST00000454398 SIK2Q9H0K1 926 aa6.15□□□□□ -1.42
HLA-DPA3-207ENST00000454398 TCEAL2Q9H3H9 227 aaPredicted RBP6.15□□□□□ -1.42
HLA-DPA3-207ENST00000454398 ASCL3Q9NQ33 180 aa6.15□□□□□ -1.42
HLA-DPA3-207ENST00000454398 VPS51Q9UID3 782 aa6.15□□□□□ -1.42
HLA-DPA3-207ENST00000454398 KLF15Q9UIH9 416 aa6.15□□□□□ -1.42
HLA-DPA3-207ENST00000454398 SLC25A13Q9UJS0 675 aa6.15□□□□□ -1.42
HLA-DPA3-207ENST00000454398 MAN1B1Q9UKM7 699 aa6.15□□□□□ -1.42
HLA-DPA3-207ENST00000454398 PNMA8BQ9ULN7 279 aaPredicted RBP6.15□□□□□ -1.42
HLA-DPA3-207ENST00000454398 PPM1HQ9ULR3 514 aa6.15□□□□□ -1.42
HLA-DPA3-207ENST00000454398 ZFR2Q9UPR6 939 aaKnown RBP6.15□□□□□ -1.42
HLA-DPA3-207ENST00000454398 HS3ST4Q9Y661 456 aa6.15□□□□□ -1.42
HLA-DPA3-207ENST00000454398 UBR5O95071 2799 aaPredicted RBP6.14□□□□□ -1.43
HLA-DPA3-207ENST00000454398 TEX51A0A1B0GUA7 166 aa6.14□□□□□ -1.43
HLA-DPA3-207ENST00000454398 A0A1W2PQ27 194 aa6.14□□□□□ -1.43
HLA-DPA3-207ENST00000454398 A0A1W2PQ64 194 aa6.14□□□□□ -1.43
HLA-DPA3-207ENST00000454398 CPED1A4D0V7 1026 aa6.14□□□□□ -1.43
HLA-DPA3-207ENST00000454398 POM121BA6NF01 834 aa6.14□□□□□ -1.43
HLA-DPA3-207ENST00000454398 BECN2A8MW95 431 aa6.14□□□□□ -1.43
HLA-DPA3-207ENST00000454398 KCNU1A8MYU2 1149 aa6.14□□□□□ -1.43
HLA-DPA3-207ENST00000454398 C1QTNF3-AMACRE9PGA6 284 aa6.14□□□□□ -1.43
HLA-DPA3-207ENST00000454398 J3QKU1 62 aa6.14□□□□□ -1.43
HLA-DPA3-207ENST00000454398 K7ESM1 405 aa6.14□□□□□ -1.43
HLA-DPA3-207ENST00000454398 MUSKO15146 869 aa6.14□□□□□ -1.43
HLA-DPA3-207ENST00000454398 SPINT1O43278 529 aa6.14□□□□□ -1.43
HLA-DPA3-207ENST00000454398 ATP9BO43861 1147 aa6.14□□□□□ -1.43
HLA-DPA3-207ENST00000454398 PCDH8O95206 1070 aa6.14□□□□□ -1.43
HLA-DPA3-207ENST00000454398 RHOCP08134 193 aa6.14□□□□□ -1.43
HLA-DPA3-207ENST00000454398 C1SP09871 688 aa6.14□□□□□ -1.43
HLA-DPA3-207ENST00000454398 GNA15P30679 374 aa6.14□□□□□ -1.43
HLA-DPA3-207ENST00000454398 ACTN2P35609 894 aa6.14□□□□□ -1.43
HLA-DPA3-207ENST00000454398 ABL2P42684 1182 aa6.14□□□□□ -1.43
HLA-DPA3-207ENST00000454398 RXRGP48443 463 aa6.14□□□□□ -1.43
HLA-DPA3-207ENST00000454398 TMPRSS3P57727 454 aa6.14□□□□□ -1.43
HLA-DPA3-207ENST00000454398 FKBP3Q00688 224 aaKnown RBP6.14□□□□□ -1.43
HLA-DPA3-207ENST00000454398 LRRC63Q05C16 580 aa6.14□□□□□ -1.43
HLA-DPA3-207ENST00000454398 KCNMA1Q12791 1236 aa6.14□□□□□ -1.43
HLA-DPA3-207ENST00000454398 SFSWAPQ12872 951 aaKnown RBP6.14□□□□□ -1.43
HLA-DPA3-207ENST00000454398 ZNF211Q13398 564 aaPredicted RBP6.14□□□□□ -1.43
HLA-DPA3-207ENST00000454398 EIF4EBP2Q13542 120 aaPredicted RBP6.14□□□□□ -1.43
HLA-DPA3-207ENST00000454398 FZD2Q14332 565 aa6.14□□□□□ -1.43
HLA-DPA3-207ENST00000454398 CNGA2Q16280 664 aa6.14□□□□□ -1.43
HLA-DPA3-207ENST00000454398 ARHGAP44Q17R89 818 aa6.14□□□□□ -1.43
HLA-DPA3-207ENST00000454398 PTPN20Q4JDL3 420 aa6.14□□□□□ -1.43
HLA-DPA3-207ENST00000454398 RAB6CQ53S08 254 aa6.14□□□□□ -1.43
HLA-DPA3-207ENST00000454398 RABGAP1LQ5R372 815 aa6.14□□□□□ -1.43
HLA-DPA3-207ENST00000454398 PERM1Q5SV97 790 aa6.14□□□□□ -1.43
HLA-DPA3-207ENST00000454398 OLFML1Q6UWY5 402 aa6.14□□□□□ -1.43
HLA-DPA3-207ENST00000454398 PARS2Q7L3T8 475 aaKnown RBP6.14□□□□□ -1.43
HLA-DPA3-207ENST00000454398 EFL1Q7Z2Z2 1120 aaKnown RBP6.14□□□□□ -1.43
HLA-DPA3-207ENST00000454398 PRICKLE2Q7Z3G6 844 aa6.14□□□□□ -1.43
HLA-DPA3-207ENST00000454398 PRPF39Q86UA1 669 aaKnown RBP6.14□□□□□ -1.43
HLA-DPA3-207ENST00000454398 HORMAD1Q86X24 394 aa6.14□□□□□ -1.43
HLA-DPA3-207ENST00000454398 OXR1Q8N573 874 aa6.14□□□□□ -1.43
HLA-DPA3-207ENST00000454398 SH2D3CQ8N5H7 860 aa6.14□□□□□ -1.43
HLA-DPA3-207ENST00000454398 ATP11CQ8NB49 1132 aa6.14□□□□□ -1.43
HLA-DPA3-207ENST00000454398 KDM1BQ8NB78 822 aa6.14□□□□□ -1.43
HLA-DPA3-207ENST00000454398 OR2A12Q8NGT7 310 aa6.14□□□□□ -1.43
HLA-DPA3-207ENST00000454398 IFI44Q8TCB0 444 aa6.14□□□□□ -1.43
HLA-DPA3-207ENST00000454398 MAPK15Q8TD08 544 aa6.14□□□□□ -1.43
HLA-DPA3-207ENST00000454398 KCNE4Q8WWG9 221 aa6.14□□□□□ -1.43
HLA-DPA3-207ENST00000454398 NELFBQ8WX92 580 aa6.14□□□□□ -1.43
HLA-DPA3-207ENST00000454398 RFFLQ8WZ73 363 aa6.14□□□□□ -1.43
HLA-DPA3-207ENST00000454398 SMARCE1Q969G3 411 aa6.14□□□□□ -1.43
HLA-DPA3-207ENST00000454398 FUBP1Q96AE4 644 aaKnown RBP6.14□□□□□ -1.43
HLA-DPA3-207ENST00000454398 KLHDC7BQ96G42 594 aa6.14□□□□□ -1.43
HLA-DPA3-207ENST00000454398 PPP1R13BQ96KQ4 1090 aa6.14□□□□□ -1.43
HLA-DPA3-207ENST00000454398 HSFY1Q96LI6 401 aa6.14□□□□□ -1.43
HLA-DPA3-207ENST00000454398 DEPDC7Q96QD5 511 aa6.14□□□□□ -1.43
HLA-DPA3-207ENST00000454398 FEM1AQ9BSK4 669 aa6.14□□□□□ -1.43
HLA-DPA3-207ENST00000454398 SLC4A5Q9BY07 1137 aa6.14□□□□□ -1.43
HLA-DPA3-207ENST00000454398 TM6SF2Q9BZW4 377 aa6.14□□□□□ -1.43
HLA-DPA3-207ENST00000454398 RAB6CQ9H0N0 254 aa6.14□□□□□ -1.43
HLA-DPA3-207ENST00000454398 POPDC2Q9HBU9 364 aa6.14□□□□□ -1.43
HLA-DPA3-207ENST00000454398 PIGVQ9NUD9 493 aa6.14□□□□□ -1.43
HLA-DPA3-207ENST00000454398 MPP6Q9NZW5 540 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms